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The map label for this gene is 150397927

Identifier: 150397927

GI number: 150397927

Start: 2841299

End: 2842060

Strand: Reverse

Name: 150397927

Synonym: Smed_2729

Alternate gene names: NA

Gene position: 2842060-2841299 (Counterclockwise)

Preceding gene: 150397928

Following gene: 150397926

Centisome position: 75.15

GC content: 65.49

Gene sequence:

>762_bases
ATGAAAGAAAACGACATCGAACCCGAAATCCTGAGTGCCTATATCGATGGTGAGCTCGAGCCGGAGGAGGCGTCGCGGGT
CGCGCGCCTGATTGCTTCCGACGAGGGCGTCGCGCGCCGCGCAGCCAGGCTGTCCGAGGTCAAGGCGGCGGTTGCGGGAA
TGGCTCCGGAAATTGTCGTAGTGACGGTGCCGCGCCCGCGACCGGTGAGCAGATGGATGCTGTCGCTTGCGGCGGGTGCA
TGCGTTCTCCTCATCGTCTCCGCAGCGACGTGGTTCGGCCTGGCAAGGATGCCGGCGGGGCTGCCGGCGGAGGCGGCGGT
TCGCGACGCCGCACTGGAGCACGCGGCATGGATCGAAGGTTCTCTTACGCCACCCATGCTTCCGGTTTCCGCACCCGGCG
AGGTGTTTGTACCGGAGATGACAGCCGCCGGATTGACCCCTGCCTTTGTGCGCGACGCGTCGATTGGCGGTGAGGCCGCG
ACGCATACAGGCTATGTCGGCCGCTCCGGCTGCCGGCTGAGCCTCTTCCGGATCGCTCGCCCCGGAGCCGGGCACGGGTT
CGACATGGCAAGAGAAGACGGCCTGCTTCACGCCTCCTGGTCAAACGATACCACCAGCTTTCTGCTCGTCGCGCGAGGGA
TGGACGAAGCCCGCTTCGCCTTTCTTTCGGGGGCTCTGAAACTGGCGAGTGAAAGGGATGGCCGGGGAAAGAGGGAAGTC
ATCGCGAGCCTCGAGGCGATGCATAAGCCGTGCGTCGGCTGA

Upstream 100 bases:

>100_bases
GTACGGTCATGAGCCGGGTCAGCCGTGCTAGGCGGGCTCTGGCCGCTCACCTCGGCGAGACCAATGTCGTCGACCTTGCC
CGGCAACGAGAAAGCCGCAA

Downstream 100 bases:

>100_bases
CGCCTGGCGGTTTTTGGCGCGCTTGATTGCAGACATTGACCGGCGTCCTTCCGGGGAGCCGGTCAGGATTTGGCATATCT
TCGGGAAAATGTCGGGTCGA

Product: putative transmembrane anti-sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKENDIEPEILSAYIDGELEPEEASRVARLIASDEGVARRAARLSEVKAAVAGMAPEIVVVTVPRPRPVSRWMLSLAAGA
CVLLIVSAATWFGLARMPAGLPAEAAVRDAALEHAAWIEGSLTPPMLPVSAPGEVFVPEMTAAGLTPAFVRDASIGGEAA
THTGYVGRSGCRLSLFRIARPGAGHGFDMAREDGLLHASWSNDTTSFLLVARGMDEARFAFLSGALKLASERDGRGKREV
IASLEAMHKPCVG

Sequences:

>Translated_253_residues
MKENDIEPEILSAYIDGELEPEEASRVARLIASDEGVARRAARLSEVKAAVAGMAPEIVVVTVPRPRPVSRWMLSLAAGA
CVLLIVSAATWFGLARMPAGLPAEAAVRDAALEHAAWIEGSLTPPMLPVSAPGEVFVPEMTAAGLTPAFVRDASIGGEAA
THTGYVGRSGCRLSLFRIARPGAGHGFDMAREDGLLHASWSNDTTSFLLVARGMDEARFAFLSGALKLASERDGRGKREV
IASLEAMHKPCVG
>Mature_253_residues
MKENDIEPEILSAYIDGELEPEEASRVARLIASDEGVARRAARLSEVKAAVAGMAPEIVVVTVPRPRPVSRWMLSLAAGA
CVLLIVSAATWFGLARMPAGLPAEAAVRDAALEHAAWIEGSLTPPMLPVSAPGEVFVPEMTAAGLTPAFVRDASIGGEAA
THTGYVGRSGCRLSLFRIARPGAGHGFDMAREDGLLHASWSNDTTSFLLVARGMDEARFAFLSGALKLASERDGRGKREV
IASLEAMHKPCVG

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26684; Mature: 26684

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENDIEPEILSAYIDGELEPEEASRVARLIASDEGVARRAARLSEVKAAVAGMAPEIVV
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEE
VTVPRPRPVSRWMLSLAAGACVLLIVSAATWFGLARMPAGLPAEAAVRDAALEHAAWIEG
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
SLTPPMLPVSAPGEVFVPEMTAAGLTPAFVRDASIGGEAATHTGYVGRSGCRLSLFRIAR
CCCCCCCCCCCCCCEECCCHHHCCCCHHHHHCCCCCCCCHHCCCCCCCCCCEEEEEEEEC
PGAGHGFDMAREDGLLHASWSNDTTSFLLVARGMDEARFAFLSGALKLASERDGRGKREV
CCCCCCCCCHHCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHH
IASLEAMHKPCVG
HHHHHHHHCCCCC
>Mature Secondary Structure
MKENDIEPEILSAYIDGELEPEEASRVARLIASDEGVARRAARLSEVKAAVAGMAPEIVV
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEE
VTVPRPRPVSRWMLSLAAGACVLLIVSAATWFGLARMPAGLPAEAAVRDAALEHAAWIEG
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
SLTPPMLPVSAPGEVFVPEMTAAGLTPAFVRDASIGGEAATHTGYVGRSGCRLSLFRIAR
CCCCCCCCCCCCCCEECCCHHHCCCCHHHHHCCCCCCCCHHCCCCCCCCCCEEEEEEEEC
PGAGHGFDMAREDGLLHASWSNDTTSFLLVARGMDEARFAFLSGALKLASERDGRGKREV
CCCCCCCCCHHCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHH
IASLEAMHKPCVG
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA