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The map label for this gene is ybgF [C]

Identifier: 150397823

GI number: 150397823

Start: 2725404

End: 2726441

Strand: Reverse

Name: ybgF [C]

Synonym: Smed_2625

Alternate gene names: 150397823

Gene position: 2726441-2725404 (Counterclockwise)

Preceding gene: 150397824

Following gene: 150397822

Centisome position: 72.09

GC content: 62.33

Gene sequence:

>1038_bases
ATGAAGAAATTTGTCGTGGCAGGACTGCTTGGCCTTGTGACCCTTGCGGGCCTCGGCTCTTCGGTGAATGCCATGCCGCT
TTCCGGGCTCGTTGCCCGCACGACACAGACCGATGCCGCCAGCAAGGGAGACCTTCCGGTAGTGAAGGTGCAATCACCCG
ATATTGCACGGATCGGTCAACTCGAGGAACAGATCCGCTCCCTCAACGGGCGTATCGAGGAAATGAGCTTCCAGCTCCTG
CAGATGCAGGAGCAGATCCGGAAGTTCCAGGAGGACAACGAATTCCGCTTTCAGGACCTCGAGAGCGGCAGGTCGTCTTC
CAAGAAAAGCGGCGCACTTGCAACGCCGAAATCAAATGATCAGGCGTCCGTCACCCCCGGGGTGACGGATAGCCCGAGCC
CCAGTGCTCCGGCCGCCGGAGGCGCGGATATGGCGGGCGTCGATCCAAATGCGACGGGCGCGGCGCCGGCACCGTCAACG
CTAGGTCAGATCATTTTCGACGAGAACGGCAATCCGGTCTCTGCAAGGACGGGCGTGGAGCCCGGAGCCAACGCCACTCT
GCCTGGCGTCGACACGGGGCTTGCGACCGAAGGCGGCGGCCTCAACGACAATCCGGGAAGCACGACGGAGGGCGGACAGG
CGACCGCGTCCCTCGGCGATCCGGGCGATCTCTACCAATCCGCCTACGGTCACGTGCTTTCGGGTGATTACGGTATCGCC
GAGCAGGAGTTCCGCAATTATCTCGAAGCCTTTCCGAGCGGCGACAAGGCAGCCGATGCGAGTTTCTGGATGGGCGAGGC
ACAATATTCGCAAGGCAAGTACAGCGACGCCGCCAAGACTTTCCTCAACGCGCATCAGAGCCACGGCAAATCACCCAAGG
CGCCCGAGATGCTGCTGAAGCTCGGCATGTCGCTCGGTGCCCTCGACAACAAGGAAACGGCCTGCGCGACGCTGCGCGAG
GTCGGCAAGCGCTATCCGAAAGCATCGCCGGCCGTGAAGGCCAAGGTGACGAGCGAACAGAGCCGTTTCGGCTGCTGA

Upstream 100 bases:

>100_bases
CGGCAGTTGGAAAACTGTGCGGCACCCACCTCGGAATCGGCAGATGTACCGCGGAACGCGATCAAAGGTGGGATATTCGG
TTACGAACAGGACAAATGAA

Downstream 100 bases:

>100_bases
GGCGGGCCCATATGCCCGATGCCGTCTTCGACACGGCCAGTTATTTTCTTCGTTCCTTTACGCGGCCCTGCAGGATTCTC
GTGGCCGTCTCCGGTGGCAG

Product: Tol-Pal system YbgF

Products: NA

Alternate protein names: L-Pal System YbgF; TPR Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR RepeatMolluscan Rhodopsin C-Terminal Domain Protein; TPR Repeat Protein; L System Periplasmic Component YbgF; Tetratricopeptide TPR2 Protein; TPR Domain Protein; Tetratricopeptide Domain-Containing Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MKKFVVAGLLGLVTLAGLGSSVNAMPLSGLVARTTQTDAASKGDLPVVKVQSPDIARIGQLEEQIRSLNGRIEEMSFQLL
QMQEQIRKFQEDNEFRFQDLESGRSSSKKSGALATPKSNDQASVTPGVTDSPSPSAPAAGGADMAGVDPNATGAAPAPST
LGQIIFDENGNPVSARTGVEPGANATLPGVDTGLATEGGGLNDNPGSTTEGGQATASLGDPGDLYQSAYGHVLSGDYGIA
EQEFRNYLEAFPSGDKAADASFWMGEAQYSQGKYSDAAKTFLNAHQSHGKSPKAPEMLLKLGMSLGALDNKETACATLRE
VGKRYPKASPAVKAKVTSEQSRFGC

Sequences:

>Translated_345_residues
MKKFVVAGLLGLVTLAGLGSSVNAMPLSGLVARTTQTDAASKGDLPVVKVQSPDIARIGQLEEQIRSLNGRIEEMSFQLL
QMQEQIRKFQEDNEFRFQDLESGRSSSKKSGALATPKSNDQASVTPGVTDSPSPSAPAAGGADMAGVDPNATGAAPAPST
LGQIIFDENGNPVSARTGVEPGANATLPGVDTGLATEGGGLNDNPGSTTEGGQATASLGDPGDLYQSAYGHVLSGDYGIA
EQEFRNYLEAFPSGDKAADASFWMGEAQYSQGKYSDAAKTFLNAHQSHGKSPKAPEMLLKLGMSLGALDNKETACATLRE
VGKRYPKASPAVKAKVTSEQSRFGC
>Mature_345_residues
MKKFVVAGLLGLVTLAGLGSSVNAMPLSGLVARTTQTDAASKGDLPVVKVQSPDIARIGQLEEQIRSLNGRIEEMSFQLL
QMQEQIRKFQEDNEFRFQDLESGRSSSKKSGALATPKSNDQASVTPGVTDSPSPSAPAAGGADMAGVDPNATGAAPAPST
LGQIIFDENGNPVSARTGVEPGANATLPGVDTGLATEGGGLNDNPGSTTEGGQATASLGDPGDLYQSAYGHVLSGDYGIA
EQEFRNYLEAFPSGDKAADASFWMGEAQYSQGKYSDAAKTFLNAHQSHGKSPKAPEMLLKLGMSLGALDNKETACATLRE
VGKRYPKASPAVKAKVTSEQSRFGC

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35803; Mature: 35803

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFVVAGLLGLVTLAGLGSSVNAMPLSGLVARTTQTDAASKGDLPVVKVQSPDIARIGQ
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCHHHHHH
LEEQIRSLNGRIEEMSFQLLQMQEQIRKFQEDNEFRFQDLESGRSSSKKSGALATPKSND
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
QASVTPGVTDSPSPSAPAAGGADMAGVDPNATGAAPAPSTLGQIIFDENGNPVSARTGVE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEEECCCCCEECCCCCCC
PGANATLPGVDTGLATEGGGLNDNPGSTTEGGQATASLGDPGDLYQSAYGHVLSGDYGIA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCC
EQEFRNYLEAFPSGDKAADASFWMGEAQYSQGKYSDAAKTFLNAHQSHGKSPKAPEMLLK
HHHHHHHHHHCCCCCCCCCCHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
LGMSLGALDNKETACATLREVGKRYPKASPAVKAKVTSEQSRFGC
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHCCC
>Mature Secondary Structure
MKKFVVAGLLGLVTLAGLGSSVNAMPLSGLVARTTQTDAASKGDLPVVKVQSPDIARIGQ
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCHHHHHH
LEEQIRSLNGRIEEMSFQLLQMQEQIRKFQEDNEFRFQDLESGRSSSKKSGALATPKSND
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
QASVTPGVTDSPSPSAPAAGGADMAGVDPNATGAAPAPSTLGQIIFDENGNPVSARTGVE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEEECCCCCEECCCCCCC
PGANATLPGVDTGLATEGGGLNDNPGSTTEGGQATASLGDPGDLYQSAYGHVLSGDYGIA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCC
EQEFRNYLEAFPSGDKAADASFWMGEAQYSQGKYSDAAKTFLNAHQSHGKSPKAPEMLLK
HHHHHHHHHHCCCCCCCCCCHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
LGMSLGALDNKETACATLREVGKRYPKASPAVKAKVTSEQSRFGC
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA