| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is glmM
Identifier: 150397820
GI number: 150397820
Start: 2720203
End: 2721558
Strand: Reverse
Name: glmM
Synonym: Smed_2622
Alternate gene names: 150397820
Gene position: 2721558-2720203 (Counterclockwise)
Preceding gene: 150397821
Following gene: 150397819
Centisome position: 71.96
GC content: 62.39
Gene sequence:
>1356_bases ATGAAGCGCAAATATTTCGGCACCGATGGTATTCGCGGCCAATCCAATATATTTCCGATGACGCCGGACCTCGCGATGCG GGTCGGTATTGCAGTAGGAACCATTTTCAGAAACGGAGCTCACCGCCACCGCGTGGTGATCGGCAAGGACACGCGTCTTT CCGGCTACATGCTTGAAAATGCGATGGTCGCCGGATTCACGGCGGCCGGGCTCGACGTGTTTCTCCTCGGTCCGATCCCG ACGCCCGGCGTCGCCATGCTGACCCGTTCGCTGAGGGCTGATATCGGCGTGATGATCTCGGCCTCTCACAACGCGTTCCG CGACAACGGCATCAAGCTCTTCGGACCCGATGGCTACAAGCTTTCCGACGACATCGAGGAAAAGATCGAGGAACTGCTGG ATCAGGACATGACCCGCCAGCTTGCAAAACCGGAGGACATCGGCCGGGCGAAGCGGGTCGACGGCGACATCTATCGCTAT ATCGAGCAGGCCAAGCGGACGCTGCCGCGCGACGTTACGCTGACAGGGCTCAGAATCGCGATCGATTGCGCCAACGGTGC CGCCTACAAGGTCGCCCCCTCCGCCCTTTGGGAGCTCGGCGCCGAGGTCGTTCCCATCGGGACCGAACCCAATGGCGTCA ACATCAATCTCGAATGCGGGTCGACGCATCCGGCCGCGCTGCAGAAGAAGGTGCACGAGGTGAGGGCGGACATCGGCATC GCGCTCGATGGAGATGCCGACCGTGTATTGATCATCGATGAAGAGGGCCAGGTCATCGATGGAGACCAGCTCATGGCGGT GATCGCCGACAGTTGGGCAGCCGACGGCATGCTCAAGGGTGGCGGCATTGCCGCGACCGTCATGTCGAATCTCGGTCTCG AACGCTACCTCCAGGCGCGTCGGCTCAAACTCCACCGCACCAAGGTCGGCGACCGCTACGTCGTCGAGCAGATGCGCCAG GACGGCCTGAACGTCGGTGGCGAACAGTCCGGCCATATCGTGCTTTCCGACTTCGGAACGACGGGTGACGGGCTTGTCGC GGCTCTGCAGATCCTTGCAGTCGTCAAACGCCAGGGCAAGACGGTGAGCGAGATATGCCGCCGTTTCGAGCCGGTGCCGC AGGTCCTGAAAAACGTGCGGATTTCGGCAGGAAAGCCGCTGGAAGATGCCGGGGTCAAGCAGGCGATTGCCGATGCGGAG GCGCAGCTCGCCAAGAACGGGCGGCTGCTCATCCGTCCCTCCGGCACCGAACCGCTGATCCGCGTCATGGCGGAAGGCGA CGATCGCGGAAAGGTCGAGCGCATCGTCGACGAACTTGTCAGCGTGATCGGCGCCGTACGCAACGCCGCTGCCTGA
Upstream 100 bases:
>100_bases CTGCAGGCGGGGTCGCGGGATGATGAAGGCCAATCGGGGAACACGCAGGCAGACGCGGCCGGGGCAAGCGGCGACGCCCA AAGAGGACAATGGAGTTTCT
Downstream 100 bases:
>100_bases GCTTGGAAAGAAAGCGCAGCTTCGGGCTCTCATCCGCCGGCGGGGAGGTGCAGGCGGATGAGGGGCAAGCACTGCACGTG AATACAAGCGAGCTAATACT
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MKRKYFGTDGIRGQSNIFPMTPDLAMRVGIAVGTIFRNGAHRHRVVIGKDTRLSGYMLENAMVAGFTAAGLDVFLLGPIP TPGVAMLTRSLRADIGVMISASHNAFRDNGIKLFGPDGYKLSDDIEEKIEELLDQDMTRQLAKPEDIGRAKRVDGDIYRY IEQAKRTLPRDVTLTGLRIAIDCANGAAYKVAPSALWELGAEVVPIGTEPNGVNINLECGSTHPAALQKKVHEVRADIGI ALDGDADRVLIIDEEGQVIDGDQLMAVIADSWAADGMLKGGGIAATVMSNLGLERYLQARRLKLHRTKVGDRYVVEQMRQ DGLNVGGEQSGHIVLSDFGTTGDGLVAALQILAVVKRQGKTVSEICRRFEPVPQVLKNVRISAGKPLEDAGVKQAIADAE AQLAKNGRLLIRPSGTEPLIRVMAEGDDRGKVERIVDELVSVIGAVRNAAA
Sequences:
>Translated_451_residues MKRKYFGTDGIRGQSNIFPMTPDLAMRVGIAVGTIFRNGAHRHRVVIGKDTRLSGYMLENAMVAGFTAAGLDVFLLGPIP TPGVAMLTRSLRADIGVMISASHNAFRDNGIKLFGPDGYKLSDDIEEKIEELLDQDMTRQLAKPEDIGRAKRVDGDIYRY IEQAKRTLPRDVTLTGLRIAIDCANGAAYKVAPSALWELGAEVVPIGTEPNGVNINLECGSTHPAALQKKVHEVRADIGI ALDGDADRVLIIDEEGQVIDGDQLMAVIADSWAADGMLKGGGIAATVMSNLGLERYLQARRLKLHRTKVGDRYVVEQMRQ DGLNVGGEQSGHIVLSDFGTTGDGLVAALQILAVVKRQGKTVSEICRRFEPVPQVLKNVRISAGKPLEDAGVKQAIADAE AQLAKNGRLLIRPSGTEPLIRVMAEGDDRGKVERIVDELVSVIGAVRNAAA >Mature_451_residues MKRKYFGTDGIRGQSNIFPMTPDLAMRVGIAVGTIFRNGAHRHRVVIGKDTRLSGYMLENAMVAGFTAAGLDVFLLGPIP TPGVAMLTRSLRADIGVMISASHNAFRDNGIKLFGPDGYKLSDDIEEKIEELLDQDMTRQLAKPEDIGRAKRVDGDIYRY IEQAKRTLPRDVTLTGLRIAIDCANGAAYKVAPSALWELGAEVVPIGTEPNGVNINLECGSTHPAALQKKVHEVRADIGI ALDGDADRVLIIDEEGQVIDGDQLMAVIADSWAADGMLKGGGIAATVMSNLGLERYLQARRLKLHRTKVGDRYVVEQMRQ DGLNVGGEQSGHIVLSDFGTTGDGLVAALQILAVVKRQGKTVSEICRRFEPVPQVLKNVRISAGKPLEDAGVKQAIADAE AQLAKNGRLLIRPSGTEPLIRVMAEGDDRGKVERIVDELVSVIGAVRNAAA
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=447, Percent_Identity=48.993288590604, Blast_Score=414, Evalue=1e-117, Organism=Escherichia coli, GI1788361, Length=441, Percent_Identity=27.2108843537415, Blast_Score=111, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_SINMW (A6UCS2)
Other databases:
- EMBL: CP000738 - RefSeq: YP_001328287.1 - ProteinModelPortal: A6UCS2 - SMR: A6UCS2 - STRING: A6UCS2 - GeneID: 5323491 - GenomeReviews: CP000738_GR - KEGG: smd:Smed_2622 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: VHDRYIE - ProtClustDB: PRK14315 - BioCyc: SMED366394:SMED_2622-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 48597; Mature: 48597
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 102-102
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKYFGTDGIRGQSNIFPMTPDLAMRVGIAVGTIFRNGAHRHRVVIGKDTRLSGYMLEN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECC AMVAGFTAAGLDVFLLGPIPTPGVAMLTRSLRADIGVMISASHNAFRDNGIKLFGPDGYK HHHCCEEECCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCCC LSDDIEEKIEELLDQDMTRQLAKPEDIGRAKRVDGDIYRYIEQAKRTLPRDVTLTGLRIA CCHHHHHHHHHHHHHHHHHHHCCCHHCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEE IDCANGAAYKVAPSALWELGAEVVPIGTEPNGVNINLECGSTHPAALQKKVHEVRADIGI EEECCCCEEEECHHHHHHCCCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCE ALDGDADRVLIIDEEGQVIDGDQLMAVIADSWAADGMLKGGGIAATVMSNLGLERYLQAR EEECCCCEEEEECCCCCEECCCCEEHHHHHHHHCCCEECCCCHHHHHHHHCCHHHHHHHH RLKLHRTKVGDRYVVEQMRQDGLNVGGEQSGHIVLSDFGTTGDGLVAALQILAVVKRQGK HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC TVSEICRRFEPVPQVLKNVRISAGKPLEDAGVKQAIADAEAQLAKNGRLLIRPSGTEPLI CHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH RVMAEGDDRGKVERIVDELVSVIGAVRNAAA HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRKYFGTDGIRGQSNIFPMTPDLAMRVGIAVGTIFRNGAHRHRVVIGKDTRLSGYMLEN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECC AMVAGFTAAGLDVFLLGPIPTPGVAMLTRSLRADIGVMISASHNAFRDNGIKLFGPDGYK HHHCCEEECCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCCC LSDDIEEKIEELLDQDMTRQLAKPEDIGRAKRVDGDIYRYIEQAKRTLPRDVTLTGLRIA CCHHHHHHHHHHHHHHHHHHHCCCHHCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEE IDCANGAAYKVAPSALWELGAEVVPIGTEPNGVNINLECGSTHPAALQKKVHEVRADIGI EEECCCCEEEECHHHHHHCCCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCE ALDGDADRVLIIDEEGQVIDGDQLMAVIADSWAADGMLKGGGIAATVMSNLGLERYLQAR EEECCCCEEEEECCCCCEECCCCEEHHHHHHHHCCCEECCCCHHHHHHHHCCHHHHHHHH RLKLHRTKVGDRYVVEQMRQDGLNVGGEQSGHIVLSDFGTTGDGLVAALQILAVVKRQGK HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC TVSEICRRFEPVPQVLKNVRISAGKPLEDAGVKQAIADAEAQLAKNGRLLIRPSGTEPLI CHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH RVMAEGDDRGKVERIVDELVSVIGAVRNAAA HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA