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The map label for this gene is 150397819

Identifier: 150397819

GI number: 150397819

Start: 2719134

End: 2719961

Strand: Reverse

Name: 150397819

Synonym: Smed_2621

Alternate gene names: NA

Gene position: 2719961-2719134 (Counterclockwise)

Preceding gene: 150397820

Following gene: 150397818

Centisome position: 71.92

GC content: 59.42

Gene sequence:

>828_bases
ATGAAGAAGATTTTCAGGGGCGTTGCCGCGGCTCTGCTAAGCGGCACGCCGGTATATGCGGCGGACGTCTATCAGCCGCC
GGTGGAAGCACCTTTCGTCGAGCAGCCGGTGGAGGTCGTGCAAAGCAGCGGCTGGTATCTGCGCGGCGACGTCGGATATG
CTTGGAATGATCTGCGCGGAGCGCACTATTTTCAAGGCTCGAACAGCAACCTGGTCGATTTCGACAGGGCCGATGTCGAT
GATTCCTACGTGCTCGGTGGGGGTGTCGGATACCAGATCAACAACTATCTGCGCGCCGACCTCACGCTCGATTATCTCGG
CGAGTCCGACTTCAACGGTTCTACCACGGGCGGTTGCGGGGTTGCGGTCAATTGCGTCTCGAACGATGTCGCATCGATGT
CCGCCTGGAGCCTGCTCGCCAATGCCTATGTTGACATCGGCACCTACGGCGCCTTTACCCCCTATGTCGGTGCCGGTATC
GGTGGCACCAGGGTAAAGTGGGGAACGCTGCGCAACACCAGTTGCGATGTTACCGATCCGAGCAACTGCGACCCCACGGT
CGAGCATAAGGGCGAAAGCGATTGGCGCTTCACCTATGCGCTGATGGCCGGTACCGCGGTGGATCTCACCTGCAATCTCA
AGGCCGATGTCGGTTACCGCTTCCGCCACATCAATGGCGGCGACATGTTCGGGTACAATCTGAACAGCGGTCCGGCCTAT
GACAAAGACATCTATGTTCACGAGGCGCGGGCCGGCCTGCGCTATTCTTTCGGCAACAATTGCGAGGCGGCCTATGTACC
GCCGGCGGAGCCGATCGTTTACAAGTGA

Upstream 100 bases:

>100_bases
GCGATTAACCTTTACCCTTCAGTGTGCGTCGAAGCATACGGACAGTCACGACTGTGTTTGTCGGTCGTTCAAGAATACTC
TAATGTATTGGGGTTGGGGC

Downstream 100 bases:

>100_bases
TCCTGTCAACCCTGCGTGTTCAGGCGGGCCGCCCTTCCGTTGAGGCGGCCTGTCGAAATCCTAAAATACATGGTTAACCC
ATAGTTAACCCGTGCCTGCA

Product: porin opacity type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKKIFRGVAAALLSGTPVYAADVYQPPVEAPFVEQPVEVVQSSGWYLRGDVGYAWNDLRGAHYFQGSNSNLVDFDRADVD
DSYVLGGGVGYQINNYLRADLTLDYLGESDFNGSTTGGCGVAVNCVSNDVASMSAWSLLANAYVDIGTYGAFTPYVGAGI
GGTRVKWGTLRNTSCDVTDPSNCDPTVEHKGESDWRFTYALMAGTAVDLTCNLKADVGYRFRHINGGDMFGYNLNSGPAY
DKDIYVHEARAGLRYSFGNNCEAAYVPPAEPIVYK

Sequences:

>Translated_275_residues
MKKIFRGVAAALLSGTPVYAADVYQPPVEAPFVEQPVEVVQSSGWYLRGDVGYAWNDLRGAHYFQGSNSNLVDFDRADVD
DSYVLGGGVGYQINNYLRADLTLDYLGESDFNGSTTGGCGVAVNCVSNDVASMSAWSLLANAYVDIGTYGAFTPYVGAGI
GGTRVKWGTLRNTSCDVTDPSNCDPTVEHKGESDWRFTYALMAGTAVDLTCNLKADVGYRFRHINGGDMFGYNLNSGPAY
DKDIYVHEARAGLRYSFGNNCEAAYVPPAEPIVYK
>Mature_275_residues
MKKIFRGVAAALLSGTPVYAADVYQPPVEAPFVEQPVEVVQSSGWYLRGDVGYAWNDLRGAHYFQGSNSNLVDFDRADVD
DSYVLGGGVGYQINNYLRADLTLDYLGESDFNGSTTGGCGVAVNCVSNDVASMSAWSLLANAYVDIGTYGAFTPYVGAGI
GGTRVKWGTLRNTSCDVTDPSNCDPTVEHKGESDWRFTYALMAGTAVDLTCNLKADVGYRFRHINGGDMFGYNLNSGPAY
DKDIYVHEARAGLRYSFGNNCEAAYVPPAEPIVYK

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 29734; Mature: 29734

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFRGVAAALLSGTPVYAADVYQPPVEAPFVEQPVEVVQSSGWYLRGDVGYAWNDLRG
CHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCC
AHYFQGSNSNLVDFDRADVDDSYVLGGGVGYQINNYLRADLTLDYLGESDFNGSTTGGCG
CEEEECCCCCEEECCCCCCCCCEEEECCCCEEECCEEEEEEEEEECCCCCCCCCCCCCCC
VAVNCVSNDVASMSAWSLLANAYVDIGTYGAFTPYVGAGIGGTRVKWGTLRNTSCDVTDP
EEEEECCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
SNCDPTVEHKGESDWRFTYALMAGTAVDLTCNLKADVGYRFRHINGGDMFGYNLNSGPAY
CCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCC
DKDIYVHEARAGLRYSFGNNCEAAYVPPAEPIVYK
CCEEEEEECCCCEEEECCCCCCEEECCCCCCEECC
>Mature Secondary Structure
MKKIFRGVAAALLSGTPVYAADVYQPPVEAPFVEQPVEVVQSSGWYLRGDVGYAWNDLRG
CHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCC
AHYFQGSNSNLVDFDRADVDDSYVLGGGVGYQINNYLRADLTLDYLGESDFNGSTTGGCG
CEEEECCCCCEEECCCCCCCCCEEEECCCCEEECCEEEEEEEEEECCCCCCCCCCCCCCC
VAVNCVSNDVASMSAWSLLANAYVDIGTYGAFTPYVGAGIGGTRVKWGTLRNTSCDVTDP
EEEEECCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
SNCDPTVEHKGESDWRFTYALMAGTAVDLTCNLKADVGYRFRHINGGDMFGYNLNSGPAY
CCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCC
DKDIYVHEARAGLRYSFGNNCEAAYVPPAEPIVYK
CCEEEEEECCCCEEEECCCCCCEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA