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The map label for this gene is 150397818

Identifier: 150397818

GI number: 150397818

Start: 2718145

End: 2718942

Strand: Reverse

Name: 150397818

Synonym: Smed_2620

Alternate gene names: NA

Gene position: 2718942-2718145 (Counterclockwise)

Preceding gene: 150397819

Following gene: 150397817

Centisome position: 71.89

GC content: 62.66

Gene sequence:

>798_bases
ATGGATTGGCGACGGGGACTTTGCAGTGTGGCGTTCTGCGCCGGCCTTTCGGCGCCCTTCTTCGCACAGGCCGCCGATGA
AGATTTTCTGGACGCGCCCGAAATCACGATCTCGTCAGAAGAAGCCGCCGGTGGCGGCCTGTATCTGCGTGGCGACATAG
GCTATGCGGCCTGGCTGGACGAAGGAGATCCCTACTATCGTTCCCCCGGCTCGGGCAATGTGGCCTTCGACAATGCACGT
TTCGAAGAGCCGGCCTCCGCCACGATCGGCCTGGGGTATCAGTTCACCGATGTAATTCGTGCCGACCTTACGGCCGAATA
TTTCGAGGGCCGCTTCGACGGGACCTCGCTCTCCGCCCCCCCCTGCGCGGGAGAGGGTGCGGGGACAGGGTGCGCCTTTT
CCCATCGCGCCAATTTTTCCGCGCTCGGACTAATGGCAAACGGCTATGTCGATCTGGCGACGCTTGCCGGTTTCACGCCC
TATCTCGGTGCCGGTATCGGAGCGACCCGGATCGACTGGAAAACGGCTCATGAGACATCGTCTTGCGTCGGGCCAGGCGG
TGCATGCTCCGGTAACGCCGGCGGCGCTTCCTACGGCGGACGGGACAGCTGGCGCTTTACCTATGCCCTCATGGCGGGCG
TCTCCTATGACGTCACGGACCGGCTGAAGTTCGATGCCGGCTATCGCTATTCGCAAATCTCGGACGGTGACATGTTCGGC
TCCGGGGACGCGCAGGGCTACGACGATGGGCTCTCGCGCCATGAATTCCGCGTTGGACTGCGTTTCGCGCTTTGGTAA

Upstream 100 bases:

>100_bases
GTGCCTGCAATAGTTAACGCTGATGGCCGGTTTCGTGTGCGGCGCCTTGGATCGCCAAATCCGCAGCACTTCGAAAATGG
CCCCAGCGAGAGGGCATGGC

Downstream 100 bases:

>100_bases
TGCAGCGCCGGTTTGCTTTAAACGGCAAAAGTTTCTTCAAACACGACGCTGCCGCTTGACTTCCTCTCCGAGCCGCAATA
TCCCCGACAGCGGGACACCC

Product: putative heat resistant agglutinin 1 signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MDWRRGLCSVAFCAGLSAPFFAQAADEDFLDAPEITISSEEAAGGGLYLRGDIGYAAWLDEGDPYYRSPGSGNVAFDNAR
FEEPASATIGLGYQFTDVIRADLTAEYFEGRFDGTSLSAPPCAGEGAGTGCAFSHRANFSALGLMANGYVDLATLAGFTP
YLGAGIGATRIDWKTAHETSSCVGPGGACSGNAGGASYGGRDSWRFTYALMAGVSYDVTDRLKFDAGYRYSQISDGDMFG
SGDAQGYDDGLSRHEFRVGLRFALW

Sequences:

>Translated_265_residues
MDWRRGLCSVAFCAGLSAPFFAQAADEDFLDAPEITISSEEAAGGGLYLRGDIGYAAWLDEGDPYYRSPGSGNVAFDNAR
FEEPASATIGLGYQFTDVIRADLTAEYFEGRFDGTSLSAPPCAGEGAGTGCAFSHRANFSALGLMANGYVDLATLAGFTP
YLGAGIGATRIDWKTAHETSSCVGPGGACSGNAGGASYGGRDSWRFTYALMAGVSYDVTDRLKFDAGYRYSQISDGDMFG
SGDAQGYDDGLSRHEFRVGLRFALW
>Mature_265_residues
MDWRRGLCSVAFCAGLSAPFFAQAADEDFLDAPEITISSEEAAGGGLYLRGDIGYAAWLDEGDPYYRSPGSGNVAFDNAR
FEEPASATIGLGYQFTDVIRADLTAEYFEGRFDGTSLSAPPCAGEGAGTGCAFSHRANFSALGLMANGYVDLATLAGFTP
YLGAGIGATRIDWKTAHETSSCVGPGGACSGNAGGASYGGRDSWRFTYALMAGVSYDVTDRLKFDAGYRYSQISDGDMFG
SGDAQGYDDGLSRHEFRVGLRFALW

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 27988; Mature: 27988

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRRGLCSVAFCAGLSAPFFAQAADEDFLDAPEITISSEEAAGGGLYLRGDIGYAAWLD
CCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEECCCEEEEEC
EGDPYYRSPGSGNVAFDNARFEEPASATIGLGYQFTDVIRADLTAEYFEGRFDGTSLSAP
CCCCCEECCCCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PCAGEGAGTGCAFSHRANFSALGLMANGYVDLATLAGFTPYLGAGIGATRIDWKTAHETS
CCCCCCCCCCEEEECCCCCEEEEEEECCCEEHHHHHCCCHHHHCCCCCCEECCCCCCCCC
SCVGPGGACSGNAGGASYGGRDSWRFTYALMAGVSYDVTDRLKFDAGYRYSQISDGDMFG
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCEEECCCCCCCCCCCCCCCC
SGDAQGYDDGLSRHEFRVGLRFALW
CCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MDWRRGLCSVAFCAGLSAPFFAQAADEDFLDAPEITISSEEAAGGGLYLRGDIGYAAWLD
CCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEECCCEEEEEC
EGDPYYRSPGSGNVAFDNARFEEPASATIGLGYQFTDVIRADLTAEYFEGRFDGTSLSAP
CCCCCEECCCCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PCAGEGAGTGCAFSHRANFSALGLMANGYVDLATLAGFTPYLGAGIGATRIDWKTAHETS
CCCCCCCCCCEEEECCCCCEEEEEEECCCEEHHHHHCCCHHHHCCCCCCEECCCCCCCCC
SCVGPGGACSGNAGGASYGGRDSWRFTYALMAGVSYDVTDRLKFDAGYRYSQISDGDMFG
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCCCCCCCEEECCCCCCCCCCCCCCCC
SGDAQGYDDGLSRHEFRVGLRFALW
CCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA