| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is yetK [H]
Identifier: 150397815
GI number: 150397815
Start: 2714117
End: 2715094
Strand: Direct
Name: yetK [H]
Synonym: Smed_2617
Alternate gene names: 150397815
Gene position: 2714117-2715094 (Clockwise)
Preceding gene: 150397812
Following gene: 150397829
Centisome position: 71.77
GC content: 60.12
Gene sequence:
>978_bases ATGGCAAGCCGCGGATTTAGCGCCTATATCTCGAACTCTCGTGCCAGTTCGGCAATCCTCCTCCTTCCCCTCACGGACCA CATCATCGTGAACGCCAGAGCCTATGTCTATCTCAGCATTACTGCGCTCTTTTGGGGCGGCAATTCGGTTGCAGGCAAGA TGGCCGTCGGGCACGTCAGCCCGATGATGCTGACGACGCTCCGCTGGCTGATCGCGCTGGCGGTCATCCTGGTGCTGATG ACGCCGCAGATCCGTCGCGACTGGCAAAAGATCCGCCAGCACTGGCTGCAACTCCTCGCCTACGGCGCCATCGGCTTCAC CATGTTCAATGCGTTCCTTTATTCCGCCGTGCAATACACGAGCGCCATCAACGCGGTGATCCTTCAGGCCGGCATTCCGA TGCTGATCTTCATCTTCAATTTCGCGCTTTTCAAGATGAAGGCGTCTTTCGCCCAGGTCATAGGTTTTACCGTGACGTTG ATCGGCGTGCTCATCACCGCAGCCCATGGCGATCTTGCAAGCCTCGTGCGCCTGAGCTTCAATTTCGGCGACGCACTCAT GATACTCGCCTGCATCGTCTATGCCGCCTATACGGTCGCGCTACGCTGGAAGCCCGCTATGCATTGGCAGAGCTTCATAG CTGCTCCGGCCTTCGGGGCGCTGCTGAGCGCAATACCGCTTCTCGTGTGGGAAATCGGAAAAGACGCGGCGATCATGCCG GACGCGACCGGATGGGCGATCGTGCTCTATGCGGCGATCTTCCCCTCGCTGATGTCGCAGGTCCTCTATGTACGCGGCGT GGAGATGATCGGCGCCAACCGCGCCGGCCTGTTCATCAATGCCATTCCGGTGTTCGGGACACTTCTCTCGGTGCTGCTTG TCGAAGAGATCTTCCGCCCGTTCCATCTGGTGGCGCTGGCGCTCGTCCTCGGCGGCATCGCCGTCGCCGAGCGAGGGCGG CCGAAGCCTCCGCAATGA
Upstream 100 bases:
>100_bases CGCGCATGCGGAAGGTGCGCTGTTCTCAAAACCCGCGCATCTATACTGTGTTGTCTTTCGGAAAGCGACCCCGTTATGAG CGGTCGCCGGCCCTTTTTGA
Downstream 100 bases:
>100_bases TATGACTCCACCCCTCCCCACAAGTGGGAGGGTGGAGTCAATTGAAGCCCGGGTGCCGCTCAGTCGATATTGAACACCAG CGGCTTCGCCTGGCGGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MASRGFSAYISNSRASSAILLLPLTDHIIVNARAYVYLSITALFWGGNSVAGKMAVGHVSPMMLTTLRWLIALAVILVLM TPQIRRDWQKIRQHWLQLLAYGAIGFTMFNAFLYSAVQYTSAINAVILQAGIPMLIFIFNFALFKMKASFAQVIGFTVTL IGVLITAAHGDLASLVRLSFNFGDALMILACIVYAAYTVALRWKPAMHWQSFIAAPAFGALLSAIPLLVWEIGKDAAIMP DATGWAIVLYAAIFPSLMSQVLYVRGVEMIGANRAGLFINAIPVFGTLLSVLLVEEIFRPFHLVALALVLGGIAVAERGR PKPPQ
Sequences:
>Translated_325_residues MASRGFSAYISNSRASSAILLLPLTDHIIVNARAYVYLSITALFWGGNSVAGKMAVGHVSPMMLTTLRWLIALAVILVLM TPQIRRDWQKIRQHWLQLLAYGAIGFTMFNAFLYSAVQYTSAINAVILQAGIPMLIFIFNFALFKMKASFAQVIGFTVTL IGVLITAAHGDLASLVRLSFNFGDALMILACIVYAAYTVALRWKPAMHWQSFIAAPAFGALLSAIPLLVWEIGKDAAIMP DATGWAIVLYAAIFPSLMSQVLYVRGVEMIGANRAGLFINAIPVFGTLLSVLLVEEIFRPFHLVALALVLGGIAVAERGR PKPPQ >Mature_324_residues ASRGFSAYISNSRASSAILLLPLTDHIIVNARAYVYLSITALFWGGNSVAGKMAVGHVSPMMLTTLRWLIALAVILVLMT PQIRRDWQKIRQHWLQLLAYGAIGFTMFNAFLYSAVQYTSAINAVILQAGIPMLIFIFNFALFKMKASFAQVIGFTVTLI GVLITAAHGDLASLVRLSFNFGDALMILACIVYAAYTVALRWKPAMHWQSFIAAPAFGALLSAIPLLVWEIGKDAAIMPD ATGWAIVLYAAIFPSLMSQVLYVRGVEMIGANRAGLFINAIPVFGTLLSVLLVEEIFRPFHLVALALVLGGIAVAERGRP KPPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 35390; Mature: 35259
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRGFSAYISNSRASSAILLLPLTDHIIVNARAYVYLSITALFWGGNSVAGKMAVGHVS CCCCCCHHHHCCCCCCCEEEEEEECCEEEEECCEEEEEEEEEEEECCCCCCCHHHHHHCH PMMLTTLRWLIALAVILVLMTPQIRRDWQKIRQHWLQLLAYGAIGFTMFNAFLYSAVQYT HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAINAVILQAGIPMLIFIFNFALFKMKASFAQVIGFTVTLIGVLITAAHGDLASLVRLSF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC NFGDALMILACIVYAAYTVALRWKPAMHWQSFIAAPAFGALLSAIPLLVWEIGKDAAIMP CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC DATGWAIVLYAAIFPSLMSQVLYVRGVEMIGANRAGLFINAIPVFGTLLSVLLVEEIFRP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH FHLVALALVLGGIAVAERGRPKPPQ HHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ASRGFSAYISNSRASSAILLLPLTDHIIVNARAYVYLSITALFWGGNSVAGKMAVGHVS CCCCCHHHHCCCCCCCEEEEEEECCEEEEECCEEEEEEEEEEEECCCCCCCHHHHHHCH PMMLTTLRWLIALAVILVLMTPQIRRDWQKIRQHWLQLLAYGAIGFTMFNAFLYSAVQYT HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAINAVILQAGIPMLIFIFNFALFKMKASFAQVIGFTVTLIGVLITAAHGDLASLVRLSF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC NFGDALMILACIVYAAYTVALRWKPAMHWQSFIAAPAFGALLSAIPLLVWEIGKDAAIMP CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC DATGWAIVLYAAIFPSLMSQVLYVRGVEMIGANRAGLFINAIPVFGTLLSVLLVEEIFRP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH FHLVALALVLGGIAVAERGRPKPPQ HHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]