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The map label for this gene is dnaJ [C]

Identifier: 150397759

GI number: 150397759

Start: 2659127

End: 2659762

Strand: Reverse

Name: dnaJ [C]

Synonym: Smed_2561

Alternate gene names: 150397759

Gene position: 2659762-2659127 (Counterclockwise)

Preceding gene: 150397761

Following gene: 150397758

Centisome position: 70.33

GC content: 61.32

Gene sequence:

>636_bases
ATGTGCGTCATGAAGCTCGATTCTAAATATTTCGACCGCATCCGGACGCGCCCCCGGGGCCAAGCGCGCGTGGAGCCGTC
TGCGCCGCTATGCCAGTGGGATGGATGCGACGAGACGGCAGTCCATCGGGCGCCCGTGGGACGCAATGCCGAGGGCGAGT
ATTTCATGTTCTGTTTCGAGCATGTGAAGGCATACAACAAAGGCTATAATTATTTCTCCGGCCTTTCGGACACCGAGATC
GCCCGCTACCAGAAGGAAGCGGTCACCGGACACCGTCCGACCTGGACGGTGGGCGTCAACAAGAATGCGCGTAACGCTCC
GACACAGTCGCAGACGCGCTCCGGCACGGCCGGCGCGCAGGCGCGCATGCGCGATCCCTTCGGCTTTTTCAACGAGGCAC
GGGCCCGCCAGGCACGGCACGAGCCGCGCATGCGGAAGTTGAAGACGCTCGAGGCCAAGGCTTTCGAGACGCTGGGGCTT
GCAGCCTCGGCGACCTCGGCCGACATAAAGGCGGCCTATAAGGAGCTCGTGAAGAAGCACCATCCCGACGCGAATGGCGG
AGACAGGGGATCGGAAGACCGCTTTCGGGCGGTGATTCAAGCCTATCAATTGTTAAAACAGGCTGGTTTCTGCTAA

Upstream 100 bases:

>100_bases
ACGGGACGGCGGCGCTACCCCAAACGATGCAAAATGCCCGCACAAAGCCAGCAACATTCCGCTTTGTCAATTCTTGTTGT
GGCCCTCTGCAAACCCCATA

Downstream 100 bases:

>100_bases
CAACGCGGATTATGACAGAAGCACAGTTTGCAGGCGAATGCGCGGGTGCCGTCCGGCGGCCGCTCTGGAGTTATGATGAG
CAAGATTGACCTCGACATTT

Product: heat shock protein DnaJ domain-containing protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MCVMKLDSKYFDRIRTRPRGQARVEPSAPLCQWDGCDETAVHRAPVGRNAEGEYFMFCFEHVKAYNKGYNYFSGLSDTEI
ARYQKEAVTGHRPTWTVGVNKNARNAPTQSQTRSGTAGAQARMRDPFGFFNEARARQARHEPRMRKLKTLEAKAFETLGL
AASATSADIKAAYKELVKKHHPDANGGDRGSEDRFRAVIQAYQLLKQAGFC

Sequences:

>Translated_211_residues
MCVMKLDSKYFDRIRTRPRGQARVEPSAPLCQWDGCDETAVHRAPVGRNAEGEYFMFCFEHVKAYNKGYNYFSGLSDTEI
ARYQKEAVTGHRPTWTVGVNKNARNAPTQSQTRSGTAGAQARMRDPFGFFNEARARQARHEPRMRKLKTLEAKAFETLGL
AASATSADIKAAYKELVKKHHPDANGGDRGSEDRFRAVIQAYQLLKQAGFC
>Mature_211_residues
MCVMKLDSKYFDRIRTRPRGQARVEPSAPLCQWDGCDETAVHRAPVGRNAEGEYFMFCFEHVKAYNKGYNYFSGLSDTEI
ARYQKEAVTGHRPTWTVGVNKNARNAPTQSQTRSGTAGAQARMRDPFGFFNEARARQARHEPRMRKLKTLEAKAFETLGL
AASATSADIKAAYKELVKKHHPDANGGDRGSEDRFRAVIQAYQLLKQAGFC

Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ [H]

EC number: NA

Molecular weight: Translated: 23757; Mature: 23757

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVMKLDSKYFDRIRTRPRGQARVEPSAPLCQWDGCDETAVHRAPVGRNAEGEYFMFCFE
CEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHH
HVKAYNKGYNYFSGLSDTEIARYQKEAVTGHRPTWTVGVNKNARNAPTQSQTRSGTAGAQ
HHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCH
ARMRDPFGFFNEARARQARHEPRMRKLKTLEAKAFETLGLAASATSADIKAAYKELVKKH
HHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
HPDANGGDRGSEDRFRAVIQAYQLLKQAGFC
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCVMKLDSKYFDRIRTRPRGQARVEPSAPLCQWDGCDETAVHRAPVGRNAEGEYFMFCFE
CEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHH
HVKAYNKGYNYFSGLSDTEIARYQKEAVTGHRPTWTVGVNKNARNAPTQSQTRSGTAGAQ
HHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCH
ARMRDPFGFFNEARARQARHEPRMRKLKTLEAKAFETLGLAASATSADIKAAYKELVKKH
HHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
HPDANGGDRGSEDRFRAVIQAYQLLKQAGFC
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1917840 [H]