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The map label for this gene is 150397722

Identifier: 150397722

GI number: 150397722

Start: 2623891

End: 2624541

Strand: Reverse

Name: 150397722

Synonym: Smed_2524

Alternate gene names: NA

Gene position: 2624541-2623891 (Counterclockwise)

Preceding gene: 150397723

Following gene: 150397720

Centisome position: 69.4

GC content: 56.99

Gene sequence:

>651_bases
ATGCTTTACTCCCTTTTCTTTGTGGCTTCACAATCCTGTCGCAACGCGCCTAATATAGAAGATGCAGATGCCGAATCGCT
CAGGAGAACACGCTTGACGATTGCAGTCTCACCTCAGGCCCTGCCGGCGCTCGTGCTGAACGCCGACTACAGGCCGCTGA
GTTATTATCCCTTGTCGCTCTGGTCCTGGCAGGACGCGATCAAGGCGGTCTTTCTCGACCGTGTGACGATCCTTGCCGAA
TACGAACACTCCGTTTCCTCGCCGAGTTTTTCGATGCGGCTGCCGAGCGTCGTCTGTCTCAAGAGCTATGTCCAGCCTTC
GCGTCACCCGGCCTTTACCCGGTTCAACGTTTTCCTGCGTGACAAATTCGAGTGCCAGTATTGCGGGTCGCCCGATGACC
TGACTTTCGACCACGTCATCCCGCGGGCTCATGGCGGTCAGACGACATGGCAAAACGTCGTTGCCGCCTGCTCTCCCTGC
AATCTGCGCAAGGGGAGCAAACTGCCCAAGCAGGCGGGCATGTTCCCGCATCAGAAGCCCTATCACCCGACGGTGCAGGA
TCTGCACAACAACGGACGGCTTTTTCCGCCGAACCATCTGCATGACAGCTGGATGGATTATCTCTATTGGGATGTCGAGC
TGCAGCCGTAA

Upstream 100 bases:

>100_bases
TCGCCGTGGCGCAGCGTCGCCGCGCGGCTTTTTTGGGCCTATTATGCGCAGGAAATGCGCCGCGATGCGCTCCCCGTGGT
GCCCTGAAGAAAAAAGGCGG

Downstream 100 bases:

>100_bases
AGCCGCGGCATCTTAGATCACGATGTCAGGCCCCGGCGCGCCCCGCTTAGCGCAATCGCCGCAAGCACCAGGCTCGCGAC
AACGTTCCAGCCTGCAAAAG

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain Protein; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MLYSLFFVASQSCRNAPNIEDADAESLRRTRLTIAVSPQALPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVTILAE
YEHSVSSPSFSMRLPSVVCLKSYVQPSRHPAFTRFNVFLRDKFECQYCGSPDDLTFDHVIPRAHGGQTTWQNVVAACSPC
NLRKGSKLPKQAGMFPHQKPYHPTVQDLHNNGRLFPPNHLHDSWMDYLYWDVELQP

Sequences:

>Translated_216_residues
MLYSLFFVASQSCRNAPNIEDADAESLRRTRLTIAVSPQALPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVTILAE
YEHSVSSPSFSMRLPSVVCLKSYVQPSRHPAFTRFNVFLRDKFECQYCGSPDDLTFDHVIPRAHGGQTTWQNVVAACSPC
NLRKGSKLPKQAGMFPHQKPYHPTVQDLHNNGRLFPPNHLHDSWMDYLYWDVELQP
>Mature_216_residues
MLYSLFFVASQSCRNAPNIEDADAESLRRTRLTIAVSPQALPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVTILAE
YEHSVSSPSFSMRLPSVVCLKSYVQPSRHPAFTRFNVFLRDKFECQYCGSPDDLTFDHVIPRAHGGQTTWQNVVAACSPC
NLRKGSKLPKQAGMFPHQKPYHPTVQDLHNNGRLFPPNHLHDSWMDYLYWDVELQP

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24743; Mature: 24743

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYSLFFVASQSCRNAPNIEDADAESLRRTRLTIAVSPQALPALVLNADYRPLSYYPLSL
CEEEEEEHHHHHHCCCCCCCCCCHHHHHHEEEEEEECCCCCCEEEECCCCCCCEECCCCH
WSWQDAIKAVFLDRVTILAEYEHSVSSPSFSMRLPSVVCLKSYVQPSRHPAFTRFNVFLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHCCCCCCCCEEEEEEEEE
DKFECQYCGSPDDLTFDHVIPRAHGGQTTWQNVVAACSPCNLRKGSKLPKQAGMFPHQKP
CCEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCC
YHPTVQDLHNNGRLFPPNHLHDSWMDYLYWDVELQP
CCCHHHHHHCCCCCCCCCCCHHHHHHEEEEEEEECC
>Mature Secondary Structure
MLYSLFFVASQSCRNAPNIEDADAESLRRTRLTIAVSPQALPALVLNADYRPLSYYPLSL
CEEEEEEHHHHHHCCCCCCCCCCHHHHHHEEEEEEECCCCCCEEEECCCCCCCEECCCCH
WSWQDAIKAVFLDRVTILAEYEHSVSSPSFSMRLPSVVCLKSYVQPSRHPAFTRFNVFLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHCCCCCCCCEEEEEEEEE
DKFECQYCGSPDDLTFDHVIPRAHGGQTTWQNVVAACSPCNLRKGSKLPKQAGMFPHQKP
CCEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCC
YHPTVQDLHNNGRLFPPNHLHDSWMDYLYWDVELQP
CCCHHHHHHCCCCCCCCCCCHHHHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA