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The map label for this gene is xylB [H]

Identifier: 150397678

GI number: 150397678

Start: 2560279

End: 2561712

Strand: Reverse

Name: xylB [H]

Synonym: Smed_2478

Alternate gene names: 150397678

Gene position: 2561712-2560279 (Counterclockwise)

Preceding gene: 150397679

Following gene: 150397676

Centisome position: 67.74

GC content: 66.53

Gene sequence:

>1434_bases
ATGTATCTCGGTATCGACCTTGGCACCGGTTCGGTCAAAGCACTTCTGATCGACGATGACGGAAGGGCTGTCGGTGAGGC
ATCGCGGGCCTATCCCGTCTCCTCGCCGGTGCCTGGCTATGCCGAAACGGCACCTGCGGATTGGTGGGCACAAACGGTGG
GGGCCGTGCGGGCCTGCTGCGAGGGGCGCGGCGGTGCCGTTCGCGGCGTCGGTCTCTCCGGCCAGGCTCATGGTCTTGTC
GTTATAGGGGTAGAGGCAAAACCGTTGCGCCCGGCCATTTTGTGGGCCGACCAGCGTGCCACGGCCGAAATGGAGGCAGT
GCTTGCCCTTCCGGAAGCGATACGGCTTCCGCTCGCCAACCCGGTCGTCAGCGGGATGGCCGGCCTCTCCCTGCTTTGGC
TGCGGCGGAACGAGCCCGCCACCTACGCCGCGACCCGTCGTATCCTCTCCCCTAAGGACTGGTTGAGGCTCATGATGACC
GGCGAGGTCGCAACGGAGCCCGCCGATGCGTCGATGACGCTGCTCTATGATGTCGGGACCGGCCGCTGGGCAGGGGATTT
CCTGAGCGCCTTGTCGATCGACCCTGCGATCCTGGCACCCGTCGTCGAGTCCCATTCGGTAGCCGGCAGGCTGAGCGCAG
CCGCGGCGGCTGAACTGGGTCTTCCTGCGGGGACGCCCGTGGCCGCAGGCCTTTCCGACACGGCATCCTGCCTGTTCGGC
ATGGGCCAGACGAAGCCCGGCTCCACGATCCTGCAGGTGGGGTCCGGCATCCAGATCATGTCCGTGGCCGAAGGCATCGA
GCCGCAGGTCCAGCCCTTTTACAACAGCTATCGCGGCATTGGCCGCAGCCTTTATTCGATGGCCGCTCTGCAGAACGGGG
GCACGGTGTTCGAGTGGGCGCGCATGGTGCTTGGCGCTTCCTGGCCTGAGATGTACCGCGCCGGCTTCGACGAGAGCGAA
GGAAATGGCGGCGCGGTCTTCCTGCCCTATGTGACGGGAGAGCGCGCACCGCTGCTCGATCCGAACGCCTCCGCCGCCTG
GGCCTATCTGCGCCTCGGTTGCACCCGCAGCCAGCTCATCCGATCGGTCTTCGAAGGCGTTGCGCTCGCCGTACGCGATA
GTTGGGATGCCTTGCGCGGCATAGGCCTTTCGGCCGATCGGATGCTCTTGACCGGCGGCGGCAGCACGGACCCGCGCTGG
CAGCAGATGCTTGCGGATATTCTTCAGGTGCCGCTCGTGCCGGCGCACGAGCTCGGCAATGCCACGATCGGTGCCGCCTA
TCTGGGCGGCATGGCGGCCGGTCATTGGCGGGGCGTCGAGGACATTCCTTTCCCGCAGGACCCGGCTGCGCCGGTCGAAC
CCCGCCCCTTCGACGGGCTGGACGTCCTTCTGTCGCGTTTTCGCGCCACCTATCGTGGCTTGAGGCACATCTGA

Upstream 100 bases:

>100_bases
CGGAGATCTATCGCGTCATGAACCTGACGGCCGAGCGGATCGTGTCCGAGGCCAGTCAACTCTTGCGCTGACGCGATGAC
TGCCAGACGACGGGGGAAGC

Downstream 100 bases:

>100_bases
GACCTCTGCCTGGAGCGGGATGAGGAAGAGTGCGGGCGGTTCTCCGCCCGCATCCCACGCCTCGGCTCCTTGGAGTAGAT
CACGATGTTTTCAGGTCAGG

Product: carbohydrate kinase FGGY

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MYLGIDLGTGSVKALLIDDDGRAVGEASRAYPVSSPVPGYAETAPADWWAQTVGAVRACCEGRGGAVRGVGLSGQAHGLV
VIGVEAKPLRPAILWADQRATAEMEAVLALPEAIRLPLANPVVSGMAGLSLLWLRRNEPATYAATRRILSPKDWLRLMMT
GEVATEPADASMTLLYDVGTGRWAGDFLSALSIDPAILAPVVESHSVAGRLSAAAAAELGLPAGTPVAAGLSDTASCLFG
MGQTKPGSTILQVGSGIQIMSVAEGIEPQVQPFYNSYRGIGRSLYSMAALQNGGTVFEWARMVLGASWPEMYRAGFDESE
GNGGAVFLPYVTGERAPLLDPNASAAWAYLRLGCTRSQLIRSVFEGVALAVRDSWDALRGIGLSADRMLLTGGGSTDPRW
QQMLADILQVPLVPAHELGNATIGAAYLGGMAAGHWRGVEDIPFPQDPAAPVEPRPFDGLDVLLSRFRATYRGLRHI

Sequences:

>Translated_477_residues
MYLGIDLGTGSVKALLIDDDGRAVGEASRAYPVSSPVPGYAETAPADWWAQTVGAVRACCEGRGGAVRGVGLSGQAHGLV
VIGVEAKPLRPAILWADQRATAEMEAVLALPEAIRLPLANPVVSGMAGLSLLWLRRNEPATYAATRRILSPKDWLRLMMT
GEVATEPADASMTLLYDVGTGRWAGDFLSALSIDPAILAPVVESHSVAGRLSAAAAAELGLPAGTPVAAGLSDTASCLFG
MGQTKPGSTILQVGSGIQIMSVAEGIEPQVQPFYNSYRGIGRSLYSMAALQNGGTVFEWARMVLGASWPEMYRAGFDESE
GNGGAVFLPYVTGERAPLLDPNASAAWAYLRLGCTRSQLIRSVFEGVALAVRDSWDALRGIGLSADRMLLTGGGSTDPRW
QQMLADILQVPLVPAHELGNATIGAAYLGGMAAGHWRGVEDIPFPQDPAAPVEPRPFDGLDVLLSRFRATYRGLRHI
>Mature_477_residues
MYLGIDLGTGSVKALLIDDDGRAVGEASRAYPVSSPVPGYAETAPADWWAQTVGAVRACCEGRGGAVRGVGLSGQAHGLV
VIGVEAKPLRPAILWADQRATAEMEAVLALPEAIRLPLANPVVSGMAGLSLLWLRRNEPATYAATRRILSPKDWLRLMMT
GEVATEPADASMTLLYDVGTGRWAGDFLSALSIDPAILAPVVESHSVAGRLSAAAAAELGLPAGTPVAAGLSDTASCLFG
MGQTKPGSTILQVGSGIQIMSVAEGIEPQVQPFYNSYRGIGRSLYSMAALQNGGTVFEWARMVLGASWPEMYRAGFDESE
GNGGAVFLPYVTGERAPLLDPNASAAWAYLRLGCTRSQLIRSVFEGVALAVRDSWDALRGIGLSADRMLLTGGGSTDPRW
QQMLADILQVPLVPAHELGNATIGAAYLGGMAAGHWRGVEDIPFPQDPAAPVEPRPFDGLDVLLSRFRATYRGLRHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI88196792, Length=490, Percent_Identity=22.6530612244898, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI42794763, Length=449, Percent_Identity=23.6080178173719, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI189409120, Length=449, Percent_Identity=23.8307349665924, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI4504007, Length=449, Percent_Identity=23.8307349665924, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI41393575, Length=442, Percent_Identity=21.7194570135747, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI18860918, Length=498, Percent_Identity=21.4859437751004, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1789987, Length=453, Percent_Identity=31.3465783664459, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1790005, Length=435, Percent_Identity=29.6551724137931, Blast_Score=144, Evalue=2e-35,
Organism=Escherichia coli, GI1789168, Length=483, Percent_Identity=25.879917184265, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1790361, Length=491, Percent_Identity=25.8655804480652, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1787789, Length=465, Percent_Identity=26.4516129032258, Blast_Score=97, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17535599, Length=436, Percent_Identity=22.4770642201835, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24657106, Length=473, Percent_Identity=25.369978858351, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24657102, Length=473, Percent_Identity=25.369978858351, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24654573, Length=470, Percent_Identity=23.4042553191489, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17864214, Length=470, Percent_Identity=23.4042553191489, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24655555, Length=468, Percent_Identity=21.1538461538462, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24655560, Length=468, Percent_Identity=21.1538461538462, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24655570, Length=468, Percent_Identity=21.1538461538462, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24655574, Length=468, Percent_Identity=21.1538461538462, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24655565, Length=468, Percent_Identity=21.1538461538462, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 50233; Mature: 50233

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLGIDLGTGSVKALLIDDDGRAVGEASRAYPVSSPVPGYAETAPADWWAQTVGAVRACC
CEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EGRGGAVRGVGLSGQAHGLVVIGVEAKPLRPAILWADQRATAEMEAVLALPEAIRLPLAN
CCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHCHHHHCCCCCC
PVVSGMAGLSLLWLRRNEPATYAATRRILSPKDWLRLMMTGEVATEPADASMTLLYDVGT
HHHHHHHHHEEEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
GRWAGDFLSALSIDPAILAPVVESHSVAGRLSAAAAAELGLPAGTPVAAGLSDTASCLFG
CCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
MGQTKPGSTILQVGSGIQIMSVAEGIEPQVQPFYNSYRGIGRSLYSMAALQNGGTVFEWA
CCCCCCCCHHEECCCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RMVLGASWPEMYRAGFDESEGNGGAVFLPYVTGERAPLLDPNASAAWAYLRLGCTRSQLI
HHHHCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHH
RSVFEGVALAVRDSWDALRGIGLSADRMLLTGGGSTDPRWQQMLADILQVPLVPAHELGN
HHHHHHHEEEECCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHCCC
ATIGAAYLGGMAAGHWRGVEDIPFPQDPAAPVEPRPFDGLDVLLSRFRATYRGLRHI
CEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYLGIDLGTGSVKALLIDDDGRAVGEASRAYPVSSPVPGYAETAPADWWAQTVGAVRACC
CEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EGRGGAVRGVGLSGQAHGLVVIGVEAKPLRPAILWADQRATAEMEAVLALPEAIRLPLAN
CCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHCHHHHCCCCCC
PVVSGMAGLSLLWLRRNEPATYAATRRILSPKDWLRLMMTGEVATEPADASMTLLYDVGT
HHHHHHHHHEEEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
GRWAGDFLSALSIDPAILAPVVESHSVAGRLSAAAAAELGLPAGTPVAAGLSDTASCLFG
CCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
MGQTKPGSTILQVGSGIQIMSVAEGIEPQVQPFYNSYRGIGRSLYSMAALQNGGTVFEWA
CCCCCCCCHHEECCCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RMVLGASWPEMYRAGFDESEGNGGAVFLPYVTGERAPLLDPNASAAWAYLRLGCTRSQLI
HHHHCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHH
RSVFEGVALAVRDSWDALRGIGLSADRMLLTGGGSTDPRWQQMLADILQVPLVPAHELGN
HHHHHHHEEEECCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHCCC
ATIGAAYLGGMAAGHWRGVEDIPFPQDPAAPVEPRPFDGLDVLLSRFRATYRGLRHI
CEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 2994009 [H]