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The map label for this gene is ugpA [C]

Identifier: 150397621

GI number: 150397621

Start: 2499470

End: 2500405

Strand: Direct

Name: ugpA [C]

Synonym: Smed_2421

Alternate gene names: 150397621

Gene position: 2499470-2500405 (Clockwise)

Preceding gene: 150397620

Following gene: 150397622

Centisome position: 66.09

GC content: 63.25

Gene sequence:

>936_bases
ATGGCCTATGCCGCACGCCATGAAGGCCTGCCCGCAATCCGTCCGCCGCTGATGAAGCGGATCGCCGACGCATCTGCGCC
TTATCTCTACACCGCCCCGGCGCTCATCCTTATCGTCACGGTCATGCTGGTGCCTCTGGTGCTCGGCATCTCCTACGCTT
TCCGCGACATCCAGCTGCTCAACCCCTTCTCCGGCGGTTTCGTCGGCCTCGATCATTTTCGCGCGCTCGCGCAGGACCAG
GCTTTCTTCCGCTCGCTGCGAAACACGCTCTGGTGGACCGGCGCCTCGGTCTTCCTGCAGTTCGCCTTCGGCCTCATCCT
GGCGCTTCTGCTCGACAAGCCCTTTCATGGCCGTGCGGTCGCGCAGGCGCTCGTCTTCCTGCCCTGGGCGGTGCCGAGTT
TCCTCGCAGGCCTCAACTGGGCGTGGCTCTTCAACCCCGTCGTCGGTCCGCTGCCGCACTGGCTCTTTGCGATGGGCATC
ATGAGCCAGCCGACCAACATCCTGTCCGATCCCCAGCTTGCCATGTGGGGACCGATCGTCGCCAATATCTGGTGGGGCAT
TCCCTTCTTCGCGATCACGCTTCTGGCGGCACTCCAGGCCATCCCGCGCGATCTTTACGAGGCGGCGAGCATCGATGGCG
CCGGCCCGCTGCAGCGTTTCCTTTCGATCACGCTTCCCTTCCTGGCGCCGACGATCGCGATCACCATTCTGCTGCGCACG
GTCTGGATCTCCAATTTTGCCGATCTCATCATCGTCATGACAAATGGCGGCCCGGCGGACCGCACCCAGATCGTCGCGAG
CTACATCTTCACCCAGGCGTTCAAGCGGCTCGACTTCGGCTATGCCTCGGCGATCGCGCTGGTGCTGCTGGCACTGCTCC
TCGCCTATTCATTGCTGATCGTGATCCTGCGGCAGTGGCTCCTGAGCAAGGATTGA

Upstream 100 bases:

>100_bases
TGGGCACCGGCGGCGGTTCAGCCGCCGCCGGCCGTCTCGCCTGATGACAAGAAGGCACGCCGGTCCATAACGGCGGTCAA
AAAAGGGGAAATTTCGATCG

Downstream 100 bases:

>100_bases
GAACATGCGCGCCAACAAAGCATTTCTGATCATTGCGCATCGTCTGGCGATCCTCGCCTATATCGCCTTCGCGCTGTTCC
CTCTCTTCTGGCTGCTCAAG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MAYAARHEGLPAIRPPLMKRIADASAPYLYTAPALILIVTVMLVPLVLGISYAFRDIQLLNPFSGGFVGLDHFRALAQDQ
AFFRSLRNTLWWTGASVFLQFAFGLILALLLDKPFHGRAVAQALVFLPWAVPSFLAGLNWAWLFNPVVGPLPHWLFAMGI
MSQPTNILSDPQLAMWGPIVANIWWGIPFFAITLLAALQAIPRDLYEAASIDGAGPLQRFLSITLPFLAPTIAITILLRT
VWISNFADLIIVMTNGGPADRTQIVASYIFTQAFKRLDFGYASAIALVLLALLLAYSLLIVILRQWLLSKD

Sequences:

>Translated_311_residues
MAYAARHEGLPAIRPPLMKRIADASAPYLYTAPALILIVTVMLVPLVLGISYAFRDIQLLNPFSGGFVGLDHFRALAQDQ
AFFRSLRNTLWWTGASVFLQFAFGLILALLLDKPFHGRAVAQALVFLPWAVPSFLAGLNWAWLFNPVVGPLPHWLFAMGI
MSQPTNILSDPQLAMWGPIVANIWWGIPFFAITLLAALQAIPRDLYEAASIDGAGPLQRFLSITLPFLAPTIAITILLRT
VWISNFADLIIVMTNGGPADRTQIVASYIFTQAFKRLDFGYASAIALVLLALLLAYSLLIVILRQWLLSKD
>Mature_310_residues
AYAARHEGLPAIRPPLMKRIADASAPYLYTAPALILIVTVMLVPLVLGISYAFRDIQLLNPFSGGFVGLDHFRALAQDQA
FFRSLRNTLWWTGASVFLQFAFGLILALLLDKPFHGRAVAQALVFLPWAVPSFLAGLNWAWLFNPVVGPLPHWLFAMGIM
SQPTNILSDPQLAMWGPIVANIWWGIPFFAITLLAALQAIPRDLYEAASIDGAGPLQRFLSITLPFLAPTIAITILLRTV
WISNFADLIIVMTNGGPADRTQIVASYIFTQAFKRLDFGYASAIALVLLALLLAYSLLIVILRQWLLSKD

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=287, Percent_Identity=32.404181184669, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1787570, Length=257, Percent_Identity=31.1284046692607, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1790465, Length=223, Percent_Identity=39.4618834080717, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34331; Mature: 34200

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYAARHEGLPAIRPPLMKRIADASAPYLYTAPALILIVTVMLVPLVLGISYAFRDIQLL
CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NPFSGGFVGLDHFRALAQDQAFFRSLRNTLWWTGASVFLQFAFGLILALLLDKPFHGRAV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
AQALVFLPWAVPSFLAGLNWAWLFNPVVGPLPHWLFAMGIMSQPTNILSDPQLAMWGPIV
HHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHH
ANIWWGIPFFAITLLAALQAIPRDLYEAASIDGAGPLQRFLSITLPFLAPTIAITILLRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VWISNFADLIIVMTNGGPADRTQIVASYIFTQAFKRLDFGYASAIALVLLALLLAYSLLI
HHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VILRQWLLSKD
HHHHHHHHCCC
>Mature Secondary Structure 
AYAARHEGLPAIRPPLMKRIADASAPYLYTAPALILIVTVMLVPLVLGISYAFRDIQLL
CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NPFSGGFVGLDHFRALAQDQAFFRSLRNTLWWTGASVFLQFAFGLILALLLDKPFHGRAV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
AQALVFLPWAVPSFLAGLNWAWLFNPVVGPLPHWLFAMGIMSQPTNILSDPQLAMWGPIV
HHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHH
ANIWWGIPFFAITLLAALQAIPRDLYEAASIDGAGPLQRFLSITLPFLAPTIAITILLRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VWISNFADLIIVMTNGGPADRTQIVASYIFTQAFKRLDFGYASAIALVLLALLLAYSLLI
HHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VILRQWLLSKD
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA