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The map label for this gene is yurM [H]

Identifier: 150397622

GI number: 150397622

Start: 2500410

End: 2501243

Strand: Direct

Name: yurM [H]

Synonym: Smed_2422

Alternate gene names: 150397622

Gene position: 2500410-2501243 (Clockwise)

Preceding gene: 150397621

Following gene: 150397623

Centisome position: 66.12

GC content: 62.11

Gene sequence:

>834_bases
ATGCGCGCCAACAAAGCATTTCTGATCATTGCGCATCGTCTGGCGATCCTCGCCTATATCGCCTTCGCGCTGTTCCCTCT
CTTCTGGCTGCTCAAGGTCGCGGTCACCCCGAATGATCTGCTCTATTCGGAGGGCATCCGCCTCTGGCCGTCGCGGGCGA
GCCTCGAGCACTTCGATTTCGTGCTCCGGCACAGCGCCTTTCCGGTCTTCTTCCGAAACAGCCTGATCGTTTCCGGCTCG
ACCGCCGTCATCGTCACCATCCTCGCCTCGCTCTCGGGCTACGCGCTCTCGCGCTTCCGGTTCCGCGGCAAATACTGGCT
GGTGACGCTGATGCTGCTGACGCAGATGTTTCCATTGGTCATGCTGGTCGCGCCGATCTTCAAGATCCTCTCGCCGCTGG
GGCTGACCAACAGTCTCACCGGGCTCGTGGTCGTCTACACCGCCTTCAACGTTCCCTTCGCCACGTTCCTGATGCAGTCC
TTCTTCGACGGCATTCCCAAGGACCTGGAAGAAGCCGCGATGATCGACGGCGCGACGCAGTTCGTCGCCTTCCGCCAGAT
CATCCTGCCGCTGACGCTGCCTGGGATCGCCGCGACGCTCGGCTTCGTCTTCACCGCCGCCTGGAGCGAACTGCTCTTCT
CGCTGATGCTGATCTCCGGCAATGCGCAGGCGACCTTCCCGGTCGGGCTTTTGTCCTTCGTCTCGAAATTCTCGGTGGAC
TTCGGCCAGATGATGGCCGCCGGCGTGCTGGCGCTGATCCCGGCCTGCCTCTTCTTCCTCCTCATTCAACGCTATCTCGT
GCAAGGCCTCACGGCCGGCGCGGTGAAAGGCTGA

Upstream 100 bases:

>100_bases
TATGCCTCGGCGATCGCGCTGGTGCTGCTGGCACTGCTCCTCGCCTATTCATTGCTGATCGTGATCCTGCGGCAGTGGCT
CCTGAGCAAGGATTGAGAAC

Downstream 100 bases:

>100_bases
TACCCATGGCTTCCATCGACATCGCCAACATCAAGAAGTCCTACGGTACCCACCCGGTACTGCATGACGTCGACCTCAAA
ATCAGCGACGGCGAATTCGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MRANKAFLIIAHRLAILAYIAFALFPLFWLLKVAVTPNDLLYSEGIRLWPSRASLEHFDFVLRHSAFPVFFRNSLIVSGS
TAVIVTILASLSGYALSRFRFRGKYWLVTLMLLTQMFPLVMLVAPIFKILSPLGLTNSLTGLVVVYTAFNVPFATFLMQS
FFDGIPKDLEEAAMIDGATQFVAFRQIILPLTLPGIAATLGFVFTAAWSELLFSLMLISGNAQATFPVGLLSFVSKFSVD
FGQMMAAGVLALIPACLFFLLIQRYLVQGLTAGAVKG

Sequences:

>Translated_277_residues
MRANKAFLIIAHRLAILAYIAFALFPLFWLLKVAVTPNDLLYSEGIRLWPSRASLEHFDFVLRHSAFPVFFRNSLIVSGS
TAVIVTILASLSGYALSRFRFRGKYWLVTLMLLTQMFPLVMLVAPIFKILSPLGLTNSLTGLVVVYTAFNVPFATFLMQS
FFDGIPKDLEEAAMIDGATQFVAFRQIILPLTLPGIAATLGFVFTAAWSELLFSLMLISGNAQATFPVGLLSFVSKFSVD
FGQMMAAGVLALIPACLFFLLIQRYLVQGLTAGAVKG
>Mature_277_residues
MRANKAFLIIAHRLAILAYIAFALFPLFWLLKVAVTPNDLLYSEGIRLWPSRASLEHFDFVLRHSAFPVFFRNSLIVSGS
TAVIVTILASLSGYALSRFRFRGKYWLVTLMLLTQMFPLVMLVAPIFKILSPLGLTNSLTGLVVVYTAFNVPFATFLMQS
FFDGIPKDLEEAAMIDGATQFVAFRQIILPLTLPGIAATLGFVFTAAWSELLFSLMLISGNAQATFPVGLLSFVSKFSVD
FGQMMAAGVLALIPACLFFLLIQRYLVQGLTAGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=261, Percent_Identity=34.0996168582375, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1790464, Length=295, Percent_Identity=33.2203389830508, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI1789860, Length=280, Percent_Identity=28.5714285714286, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787368, Length=164, Percent_Identity=28.0487804878049, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30468; Mature: 30468

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50928 ABC_TM1 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRANKAFLIIAHRLAILAYIAFALFPLFWLLKVAVTPNDLLYSEGIRLWPSRASLEHFDF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEECCCCCCHHHHHH
VLRHSAFPVFFRNSLIVSGSTAVIVTILASLSGYALSRFRFRGKYWLVTLMLLTQMFPLV
HHHHCCCCHHECCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MLVAPIFKILSPLGLTNSLTGLVVVYTAFNVPFATFLMQSFFDGIPKDLEEAAMIDGATQ
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHH
FVAFRQIILPLTLPGIAATLGFVFTAAWSELLFSLMLISGNAQATFPVGLLSFVSKFSVD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
FGQMMAAGVLALIPACLFFLLIQRYLVQGLTAGAVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]