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The map label for this gene is 150397584

Identifier: 150397584

GI number: 150397584

Start: 2462916

End: 2463566

Strand: Reverse

Name: 150397584

Synonym: Smed_2384

Alternate gene names: NA

Gene position: 2463566-2462916 (Counterclockwise)

Preceding gene: 150397585

Following gene: 150397583

Centisome position: 65.14

GC content: 65.28

Gene sequence:

>651_bases
TTGCATAACGGCCGCGTCATCATGATCGTGGGAAACGGTGACGTGCCCGAGGGCGTTGGCGCGACGATCGATGCCGCCGA
TCTGGTGGTCCGGTTCAACGATTGCCGCTCGGTCGGGAAAGGCGGCGGCAGGACCGATATCGTCGCCGTCTGTAATACCG
GCCGACCGGCGCTCGCGATGCTGGGCGGCGGGCGCTGGAAGACGAGCGCGCCCGTCCGGCAGGCCCGCGAGATATGGAGT
GTCCGCGCCGCTACCAGGTTCGCCGCCATGCGGGCCGCGCTTGCCGCGACGCATCCGGACCTGGACGATTTCTGCGATGA
TTACACGGATGGCTTCGAGAGCTTCGCGCGCGCTACGGCGCGCAAGCACCGGGTCATCGAAGCGGAGACGCATGATCGGC
TGGAGCGCGATCTCGCACGCTTTTCACCATCACCCTTTGTCGCGCCGTCGAGTGGTCTGGTGGTGATCGCCGACATCCTG
TCGGGATTTGCCTCGTCGGAGGATCATGTCGTGCTTGCCGGCTTCGGCCATGTGGGCTGGCAGTGGCATCCATTTGCCGC
CGAGCGCCGCTATGTCGATTCGCTCGCGGCACAAGGGCGACTTCGGCGTCTTCCTCCATTCACCTCTTCAGATTTGCCCC
AGGGAGCCTGA

Upstream 100 bases:

>100_bases
CTCGATGGAACCCATGCTGGTTTCCGGCTGCCTCGCAGAGCTGACACGCAAGCGCACTGACGAGCTCAGGAAGATCGTTG
AATCGGCGGAGAATTGATTA

Downstream 100 bases:

>100_bases
GCCATGTCCTACAAAATGTCGCGTGCGGCCTATGCCAACATGTTCGGTCCGACCGTGGGCGACAAGGTGCGGTTGGCCGA
TACCGAACTCTTCATCGAGG

Product: putative urease accessory protein

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MHNGRVIMIVGNGDVPEGVGATIDAADLVVRFNDCRSVGKGGGRTDIVAVCNTGRPALAMLGGGRWKTSAPVRQAREIWS
VRAATRFAAMRAALAATHPDLDDFCDDYTDGFESFARATARKHRVIEAETHDRLERDLARFSPSPFVAPSSGLVVIADIL
SGFASSEDHVVLAGFGHVGWQWHPFAAERRYVDSLAAQGRLRRLPPFTSSDLPQGA

Sequences:

>Translated_216_residues
MHNGRVIMIVGNGDVPEGVGATIDAADLVVRFNDCRSVGKGGGRTDIVAVCNTGRPALAMLGGGRWKTSAPVRQAREIWS
VRAATRFAAMRAALAATHPDLDDFCDDYTDGFESFARATARKHRVIEAETHDRLERDLARFSPSPFVAPSSGLVVIADIL
SGFASSEDHVVLAGFGHVGWQWHPFAAERRYVDSLAAQGRLRRLPPFTSSDLPQGA
>Mature_216_residues
MHNGRVIMIVGNGDVPEGVGATIDAADLVVRFNDCRSVGKGGGRTDIVAVCNTGRPALAMLGGGRWKTSAPVRQAREIWS
VRAATRFAAMRAALAATHPDLDDFCDDYTDGFESFARATARKHRVIEAETHDRLERDLARFSPSPFVAPSSGLVVIADIL
SGFASSEDHVVLAGFGHVGWQWHPFAAERRYVDSLAAQGRLRRLPPFTSSDLPQGA

Specific function: Involved in the expression of hydrogenase activity. May be a regulatory gene affecting the expression of the hydrogenase operon or could be involved in the process of nickel incorporation into the hydrogenase apoenzyme [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23283; Mature: 23283

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNGRVIMIVGNGDVPEGVGATIDAADLVVRFNDCRSVGKGGGRTDIVAVCNTGRPALAM
CCCCEEEEEEECCCCCCCCCCCCCHHHHEEEEHHHHHHCCCCCCEEEEEEECCCCCEEEE
LGGGRWKTSAPVRQAREIWSVRAATRFAAMRAALAATHPDLDDFCDDYTDGFESFARATA
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RKHRVIEAETHDRLERDLARFSPSPFVAPSSGLVVIADILSGFASSEDHVVLAGFGHVGW
HHHCEEECHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEECCCCCC
QWHPFAAERRYVDSLAAQGRLRRLPPFTSSDLPQGA
EECCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MHNGRVIMIVGNGDVPEGVGATIDAADLVVRFNDCRSVGKGGGRTDIVAVCNTGRPALAM
CCCCEEEEEEECCCCCCCCCCCCCHHHHEEEEHHHHHHCCCCCCEEEEEEECCCCCEEEE
LGGGRWKTSAPVRQAREIWSVRAATRFAAMRAALAATHPDLDDFCDDYTDGFESFARATA
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RKHRVIEAETHDRLERDLARFSPSPFVAPSSGLVVIADILSGFASSEDHVVLAGFGHVGW
HHHCEEECHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEECCCCCC
QWHPFAAERRYVDSLAAQGRLRRLPPFTSSDLPQGA
EECCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8121412; 11481430 [H]