| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is ureE [H]
Identifier: 150397579
GI number: 150397579
Start: 2458828
End: 2459292
Strand: Reverse
Name: ureE [H]
Synonym: Smed_2379
Alternate gene names: 150397579
Gene position: 2459292-2458828 (Counterclockwise)
Preceding gene: 150397580
Following gene: 150397578
Centisome position: 65.03
GC content: 63.01
Gene sequence:
>465_bases GTGCCATATCGGTCGACCGAAGTCCTTACGCCCGGTCCTTCCGAAGAGGCGCCGCTGCATCGCGTGAACCTGACTCATGA CCAGCGCCACTTGCGCCGTAAGCTCCTCCACCTCGAAAACGAAGACGTGGTGATGCTCGATCTCAAGGCGGCGGTGATGC TCGCCGATGGCGACCTCCTGGTGCTCGAAGGCGGCGGCTATATCGAGGTAAAAGCGGCCACGGAGGAGCTTTACGACATC CGAGCGCGTAACCCGTTGCATCTCATCGAGCTGGCCTGGCATCTGGGTAACCGGCACCTGCCGGCGGCGATTGAGGAGGG CCGGATCCTGATTGCTCGCGACCCGGTTATCCGCGCCATGCTCGAAGGCCTTGGCGCTACCGTCACGGAAGTGAACTTAC CCTTCCACCCTCTACGCGGCGCCTATCACCAGCACGGCCACGGCGACCGTCACAGCCATGGCTGA
Upstream 100 bases:
>100_bases GCCGAACCGCATCTGAAGGCCTTCCAGACTGCCGCGGCGAGCCTGCTGGCGAGCGCACGCGTCGAAATCGTGCATCCGGA AAAGGTCGAGGTGGTTTGAA
Downstream 100 bases:
>100_bases ACATGCCGATACGCAGGCGTTGCTGCGCCTCGTTACCTGGCTCTCGCCCGCCTTTCCCGTCGGCTCCTTCTCCTATTCCG GCGGATTGGAGCAGGCAATT
Product: urease accessory protein UreE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MPYRSTEVLTPGPSEEAPLHRVNLTHDQRHLRRKLLHLENEDVVMLDLKAAVMLADGDLLVLEGGGYIEVKAATEELYDI RARNPLHLIELAWHLGNRHLPAAIEEGRILIARDPVIRAMLEGLGATVTEVNLPFHPLRGAYHQHGHGDRHSHG
Sequences:
>Translated_154_residues MPYRSTEVLTPGPSEEAPLHRVNLTHDQRHLRRKLLHLENEDVVMLDLKAAVMLADGDLLVLEGGGYIEVKAATEELYDI RARNPLHLIELAWHLGNRHLPAAIEEGRILIARDPVIRAMLEGLGATVTEVNLPFHPLRGAYHQHGHGDRHSHG >Mature_153_residues PYRSTEVLTPGPSEEAPLHRVNLTHDQRHLRRKLLHLENEDVVMLDLKAAVMLADGDLLVLEGGGYIEVKAATEELYDIR ARNPLHLIELAWHLGNRHLPAAIEEGRILIARDPVIRAMLEGLGATVTEVNLPFHPLRGAYHQHGHGDRHSHG
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly [H]
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 [H]
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N [H]
EC number: NA
Molecular weight: Translated: 17260; Mature: 17129
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYRSTEVLTPGPSEEAPLHRVNLTHDQRHLRRKLLHLENEDVVMLDLKAAVMLADGDLL CCCCCCEEECCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCEE VLEGGGYIEVKAATEELYDIRARNPLHLIELAWHLGNRHLPAAIEEGRILIARDPVIRAM EEECCCEEEEEECHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCEEEEEECHHHHHH LEGLGATVTEVNLPFHPLRGAYHQHGHGDRHSHG HHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PYRSTEVLTPGPSEEAPLHRVNLTHDQRHLRRKLLHLENEDVVMLDLKAAVMLADGDLL CCCCCEEECCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCEE VLEGGGYIEVKAATEELYDIRARNPLHLIELAWHLGNRHLPAAIEEGRILIARDPVIRAM EEECCCEEEEEECHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCEEEEEECHHHHHH LEGLGATVTEVNLPFHPLRGAYHQHGHGDRHSHG HHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]