| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is ureG [H]
Identifier: 150397577
GI number: 150397577
Start: 2457520
End: 2458131
Strand: Reverse
Name: ureG [H]
Synonym: Smed_2377
Alternate gene names: 150397577
Gene position: 2458131-2457520 (Counterclockwise)
Preceding gene: 150397578
Following gene: 150397568
Centisome position: 65.0
GC content: 58.5
Gene sequence:
>612_bases ATGCCATCTAAAAACGGTCCGCTTCGCGTTGGTATCGGTGGTCCGGTCGGCTCCGGTAAGACGGCGCTGACCGAAAAGCT CTGCAAGGCGATGCGGGAGAGATATTCCCTCGCGGTCGTCACAAACGACATCTACACGAAAGAGGACGCAGAGGCGCTCG TCCGGATGCAGGCTTTGCCTTCGGAACGAATCGTCGGCGTCGAGACCGGTGGATGCCCCCATACGGCCATTCGCGAGGAC GCATCGATCAATCTTCAGGCAATTGCGGATCTGAACCGCCGGCTTCCCGAGCTGGACCTCGTCTTCATAGAATCCGGCGG CGATAATCTCGCGGCGACCTTCTCGCCCGATCTCGCCGATCTGACGATTTATGTGATCTCGGTTTGTCAGGGCGAGGAAA TTCCGCGCAAGGGCGGACCGGGAATCACCAAGTCGGATCTATTGGTGATCAACAAAAAGGATCTCGCCCCCCATGTCGGC GCAGACCTCGAGATCATGGAAAGGGATGCGGCGCGGATGCGCGGCGAGAAGCCCTTCGTGTTTTCCGACATGAAACGGGG CGATGGGGTGGAGCGGATCGTCGATTTCCTGATACTGCATGGTGGTCTCTAA
Upstream 100 bases:
>100_bases CGACGTTCATTGCGGAAATTGCGTCACTGAAGCATGAAAACCTGCATTCGCGCCTGTTCCGCTCATAATGCAGGAACAGA TAGTCGAAAGGATAGAATTG
Downstream 100 bases:
>100_bases GCCGCCTCGGTCAGAATCGCTCCAGTGCCTCTCTATCGCGGATTTCGATCAGGCGGCCCTTCACGATGACGCCCGACTGC CGCAGGGTCGAGAAGGCGCG
Product: urease accessory protein UreG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MPSKNGPLRVGIGGPVGSGKTALTEKLCKAMRERYSLAVVTNDIYTKEDAEALVRMQALPSERIVGVETGGCPHTAIRED ASINLQAIADLNRRLPELDLVFIESGGDNLAATFSPDLADLTIYVISVCQGEEIPRKGGPGITKSDLLVINKKDLAPHVG ADLEIMERDAARMRGEKPFVFSDMKRGDGVERIVDFLILHGGL
Sequences:
>Translated_203_residues MPSKNGPLRVGIGGPVGSGKTALTEKLCKAMRERYSLAVVTNDIYTKEDAEALVRMQALPSERIVGVETGGCPHTAIRED ASINLQAIADLNRRLPELDLVFIESGGDNLAATFSPDLADLTIYVISVCQGEEIPRKGGPGITKSDLLVINKKDLAPHVG ADLEIMERDAARMRGEKPFVFSDMKRGDGVERIVDFLILHGGL >Mature_202_residues PSKNGPLRVGIGGPVGSGKTALTEKLCKAMRERYSLAVVTNDIYTKEDAEALVRMQALPSERIVGVETGGCPHTAIREDA SINLQAIADLNRRLPELDLVFIESGGDNLAATFSPDLADLTIYVISVCQGEEIPRKGGPGITKSDLLVINKKDLAPHVGA DLEIMERDAARMRGEKPFVFSDMKRGDGVERIVDFLILHGGL
Specific function: Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by ureG [H]
COG id: COG0378
COG function: function code OK; Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureG family [H]
Homologues:
Organism=Escherichia coli, GI1789082, Length=185, Percent_Identity=30.8108108108108, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003495 - InterPro: IPR012202 - InterPro: IPR004400 [H]
Pfam domain/function: PF02492 cobW [H]
EC number: NA
Molecular weight: Translated: 21897; Mature: 21765
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKNGPLRVGIGGPVGSGKTALTEKLCKAMRERYSLAVVTNDIYTKEDAEALVRMQALP CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHCC SERIVGVETGGCPHTAIREDASINLQAIADLNRRLPELDLVFIESGGDNLAATFSPDLAD CCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCHHH LTIYVISVCQGEEIPRKGGPGITKSDLLVINKKDLAPHVGADLEIMERDAARMRGEKPFV HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCE FSDMKRGDGVERIVDFLILHGGL ECCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure PSKNGPLRVGIGGPVGSGKTALTEKLCKAMRERYSLAVVTNDIYTKEDAEALVRMQALP CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHCC SERIVGVETGGCPHTAIREDASINLQAIADLNRRLPELDLVFIESGGDNLAATFSPDLAD CCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCHHH LTIYVISVCQGEEIPRKGGPGITKSDLLVINKKDLAPHVGADLEIMERDAARMRGEKPFV HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCE FSDMKRGDGVERIVDFLILHGGL ECCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]