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The map label for this gene is yurN [H]

Identifier: 150397514

GI number: 150397514

Start: 2393104

End: 2394036

Strand: Reverse

Name: yurN [H]

Synonym: Smed_2314

Alternate gene names: 150397514

Gene position: 2394036-2393104 (Counterclockwise)

Preceding gene: 150397515

Following gene: 150397513

Centisome position: 63.3

GC content: 59.49

Gene sequence:

>933_bases
ATGAGCACGTCAGTCCGTCCCAAAACAAAATTCAGGCACAGCCGCCTGTCGGCCCGAAATCGCGAATGGATCGCCGGCTA
CCTTTTCGTGCTGCCCGACGCGCTCGGCCTGCTGGTTTTTCTCGGCCTGCCGATGCTCCTGTCGCTGGTGCTCGGGCTCT
ACGACGTCGACGGTTTCGGAGCCTACCGTTTCGTTGGAATGGCCAACTACACGAAAATGATGCGTGACCCGCTGTTCTGG
CAGTCCGCCAAGGTGACCGCCCTTTACGCGCTCATGCTGGTGCCGCTTCTCTATGTCTGCGGCCTGAGTTTGGCGCTGCT
TGTTCAGAAAACCAACCGCTTCAACGGCGTCATCCGCTCGATGTTCTTCGCCCCACATATGGTCAGCCTCATCGTGGTGG
CTCTGGTCTGGCAGTTCCTCGTCGTCGACAAGATTGGCGTCCTCAGCCGCCTCACGCCGGCTCTGGGACTCGGGGGCATC
TCTTTCCTGGGTGATCCCGACTATGCACTCTTTACCGTCGTGGCGGTCAGCGTCTGGTTCCTGATGGGCTACTACATGCT
GATCTTCCTCGGCGGGCTGCAGGACATTCCGGCCATGTATTACGAGGCGGCGACCATGGATGGCGCCGGACCGATCGCAA
AATTCTGGTACATCACCCTGCCGCTGCTTAAGCCCACGAGCTTCTTCGTGATCATGATCTCCATGGTGGCGGCCGTGGCA
GGATCACAGGCCTTCGACATCATCTGGGTCATGACGGGCGGCGGTCCCGCCAATTCCACCTCGGTACTGATCGTCTATAT
CTACCAGCAGGCCTTTAGTTTCGGAGCGTTCGGCTATGCAGCGGCCATGGCCTCGATCCTGGTGATTTCGCTGATGGCCA
TGACCGGCCTGATGTTCCTGCTGACCCGCGGAGGCCGCTTCAGCTATGAGTAA

Upstream 100 bases:

>100_bases
AAACCCGGCGGCCGCCCAGCACGTCCAGGAAAGCGCACGAGGCTTTCCATCCGGACGTGTGCATTTTCAAAAAGGTTAGA
GAAGCGGTGCGAGAATAGCC

Downstream 100 bases:

>100_bases
ACCGTCTCTCTATTTCAGTAATTCGCAGGTAACCGCCGTCCGCTTGATCTGGATGACGGTGGCGGCCATCCTCGCGCTAA
TGACGGTCTTCCCTTTGTTG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSTSVRPKTKFRHSRLSARNREWIAGYLFVLPDALGLLVFLGLPMLLSLVLGLYDVDGFGAYRFVGMANYTKMMRDPLFW
QSAKVTALYALMLVPLLYVCGLSLALLVQKTNRFNGVIRSMFFAPHMVSLIVVALVWQFLVVDKIGVLSRLTPALGLGGI
SFLGDPDYALFTVVAVSVWFLMGYYMLIFLGGLQDIPAMYYEAATMDGAGPIAKFWYITLPLLKPTSFFVIMISMVAAVA
GSQAFDIIWVMTGGGPANSTSVLIVYIYQQAFSFGAFGYAAAMASILVISLMAMTGLMFLLTRGGRFSYE

Sequences:

>Translated_310_residues
MSTSVRPKTKFRHSRLSARNREWIAGYLFVLPDALGLLVFLGLPMLLSLVLGLYDVDGFGAYRFVGMANYTKMMRDPLFW
QSAKVTALYALMLVPLLYVCGLSLALLVQKTNRFNGVIRSMFFAPHMVSLIVVALVWQFLVVDKIGVLSRLTPALGLGGI
SFLGDPDYALFTVVAVSVWFLMGYYMLIFLGGLQDIPAMYYEAATMDGAGPIAKFWYITLPLLKPTSFFVIMISMVAAVA
GSQAFDIIWVMTGGGPANSTSVLIVYIYQQAFSFGAFGYAAAMASILVISLMAMTGLMFLLTRGGRFSYE
>Mature_309_residues
STSVRPKTKFRHSRLSARNREWIAGYLFVLPDALGLLVFLGLPMLLSLVLGLYDVDGFGAYRFVGMANYTKMMRDPLFWQ
SAKVTALYALMLVPLLYVCGLSLALLVQKTNRFNGVIRSMFFAPHMVSLIVVALVWQFLVVDKIGVLSRLTPALGLGGIS
FLGDPDYALFTVVAVSVWFLMGYYMLIFLGGLQDIPAMYYEAATMDGAGPIAKFWYITLPLLKPTSFFVIMISMVAAVAG
SQAFDIIWVMTGGGPANSTSVLIVYIYQQAFSFGAFGYAAAMASILVISLMAMTGLMFLLTRGGRFSYE

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=287, Percent_Identity=31.0104529616725, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1787570, Length=243, Percent_Identity=28.8065843621399, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1790465, Length=357, Percent_Identity=27.1708683473389, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34105; Mature: 33974

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCCC
>Mature Secondary Structure 
STSVRPKTKFRHSRLSARNREWIAGYLFVLPDALGLLVFLGLPMLLSLVLGLYDVDGFG
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC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HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]