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The map label for this gene is 150397505

Identifier: 150397505

GI number: 150397505

Start: 2384946

End: 2385902

Strand: Direct

Name: 150397505

Synonym: Smed_2305

Alternate gene names: NA

Gene position: 2384946-2385902 (Clockwise)

Preceding gene: 150397497

Following gene: 150397506

Centisome position: 63.06

GC content: 60.08

Gene sequence:

>957_bases
ATGATAAGGACACTTTCTCGCGAATTCATGCTGGCAGGTGCCGTTTGCATGGCAACCCTGACCGCCGGACCCGCATTCGC
GGCGGAGCCGGAAAGCTGCGGTACGGTCCGCTTCTCCGACGTCGGCTGGACCGATATCACAGCAACCACCGCGACCGCGA
CGACCATCCTCGAAGCGCTCGGTTACGAGACGGACGTGAAGGTTCTGTCGGTGCCCGTTACCTACACCTCGCTGAAGAAC
AAGGACATCGACGTCTTTCTCGGCAACTGGATGCCGACCATGGAAGCGGACATCGCCCCCTATCGCGAAGACAAGTCCGT
CGAGACGGTACGCGAGAACCTCGCAGGTGCGAAATACACGCTTGCGACAAATGCCAAGGGCGCGGAGCTCGGCATCAAGG
ACTTCAAGGATATCGCCGCGCACAAGGAGGAGCTCGACGGCAAGATCTACGGGATCGAGCCGGGCAATGACGGCAACCGC
CTGATCATCGACATGGTCGAAAAAGGCACTTTCGATCTCAAGGGCTTCGAAGTCGTCGAATCTTCCGAGCAGGGCATGCT
CGCGCAGGTCGCCCGCGCTGAAAAATCCGGCGACCCGATCGTTTTTCTCGGATGGGAGCCGCATCCGATGAACGCGAATT
TCAAGCTCACCTATCTATCCGGTGGCGATGACGTGTTCGGCCCCGACTACGGTGGCGCCACCGTGCATACCAATGTGCGC
GCCGGCTACACGACCGAATGCCCCAATGTCGGCAAGCTTCTCCAAAACCTCTCGTTTTCGCTCCAGATGGAGAACGAGAT
CATGGGCAAGATCCTGAACGATGGCGAAGACCCGGAAAAGGCTGCAGCTTCGTGGCTGAAGGACAATCCGCAAGCAATCG
AACCGTGGCTTGCGGGGGTCACCACGAAGGACGGCGGCGATGGGCCGGCCGCCGTCAAGAGCGCGCTGGGCCTCTGA

Upstream 100 bases:

>100_bases
AATGTACTGAGGCAATACACTTCTTTAAATGCCGAGGTGCTTGTATTCGAGCTTCATTGGTGTTTGGCTAAGAAGAACAC
GAGGCAGGGGAACGACAACG

Downstream 100 bases:

>100_bases
CCGGATCACGCGTAGCATTTGAATTGCTGCATGTTCCGTGCTCCAATCGGCTGCGTTATGGGGATGCGTGCAGTGAGGCG
GGGAAACACCCCGCCTTTTT

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MIRTLSREFMLAGAVCMATLTAGPAFAAEPESCGTVRFSDVGWTDITATTATATTILEALGYETDVKVLSVPVTYTSLKN
KDIDVFLGNWMPTMEADIAPYREDKSVETVRENLAGAKYTLATNAKGAELGIKDFKDIAAHKEELDGKIYGIEPGNDGNR
LIIDMVEKGTFDLKGFEVVESSEQGMLAQVARAEKSGDPIVFLGWEPHPMNANFKLTYLSGGDDVFGPDYGGATVHTNVR
AGYTTECPNVGKLLQNLSFSLQMENEIMGKILNDGEDPEKAAASWLKDNPQAIEPWLAGVTTKDGGDGPAAVKSALGL

Sequences:

>Translated_318_residues
MIRTLSREFMLAGAVCMATLTAGPAFAAEPESCGTVRFSDVGWTDITATTATATTILEALGYETDVKVLSVPVTYTSLKN
KDIDVFLGNWMPTMEADIAPYREDKSVETVRENLAGAKYTLATNAKGAELGIKDFKDIAAHKEELDGKIYGIEPGNDGNR
LIIDMVEKGTFDLKGFEVVESSEQGMLAQVARAEKSGDPIVFLGWEPHPMNANFKLTYLSGGDDVFGPDYGGATVHTNVR
AGYTTECPNVGKLLQNLSFSLQMENEIMGKILNDGEDPEKAAASWLKDNPQAIEPWLAGVTTKDGGDGPAAVKSALGL
>Mature_318_residues
MIRTLSREFMLAGAVCMATLTAGPAFAAEPESCGTVRFSDVGWTDITATTATATTILEALGYETDVKVLSVPVTYTSLKN
KDIDVFLGNWMPTMEADIAPYREDKSVETVRENLAGAKYTLATNAKGAELGIKDFKDIAAHKEELDGKIYGIEPGNDGNR
LIIDMVEKGTFDLKGFEVVESSEQGMLAQVARAEKSGDPIVFLGWEPHPMNANFKLTYLSGGDDVFGPDYGGATVHTNVR
AGYTTECPNVGKLLQNLSFSLQMENEIMGKILNDGEDPEKAAASWLKDNPQAIEPWLAGVTTKDGGDGPAAVKSALGL

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34099; Mature: 34099

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTLSREFMLAGAVCMATLTAGPAFAAEPESCGTVRFSDVGWTDITATTATATTILEAL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHHH
GYETDVKVLSVPVTYTSLKNKDIDVFLGNWMPTMEADIAPYREDKSVETVRENLAGAKYT
CCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEE
LATNAKGAELGIKDFKDIAAHKEELDGKIYGIEPGNDGNRLIIDMVEKGTFDLKGFEVVE
EEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEC
SSEQGMLAQVARAEKSGDPIVFLGWEPHPMNANFKLTYLSGGDDVFGPDYGGATVHTNVR
CCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCC
AGYTTECPNVGKLLQNLSFSLQMENEIMGKILNDGEDPEKAAASWLKDNPQAIEPWLAGV
CCCCCCCCCHHHHHHCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCC
TTKDGGDGPAAVKSALGL
CCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MIRTLSREFMLAGAVCMATLTAGPAFAAEPESCGTVRFSDVGWTDITATTATATTILEAL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHHH
GYETDVKVLSVPVTYTSLKNKDIDVFLGNWMPTMEADIAPYREDKSVETVRENLAGAKYT
CCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEE
LATNAKGAELGIKDFKDIAAHKEELDGKIYGIEPGNDGNRLIIDMVEKGTFDLKGFEVVE
EEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEC
SSEQGMLAQVARAEKSGDPIVFLGWEPHPMNANFKLTYLSGGDDVFGPDYGGATVHTNVR
CCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCC
AGYTTECPNVGKLLQNLSFSLQMENEIMGKILNDGEDPEKAAASWLKDNPQAIEPWLAGV
CCCCCCCCCHHHHHHCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCC
TTKDGGDGPAAVKSALGL
CCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]