| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397503
Identifier: 150397503
GI number: 150397503
Start: 2382331
End: 2383479
Strand: Reverse
Name: 150397503
Synonym: Smed_2303
Alternate gene names: NA
Gene position: 2383479-2382331 (Counterclockwise)
Preceding gene: 150397504
Following gene: 150397502
Centisome position: 63.02
GC content: 60.49
Gene sequence:
>1149_bases ATGAATACCGCCATTTCTCCGGCCGTCAGGCAATATTTCGGTTCCATCCGCGCCGCTCTGGCAGGGCTCGAGCTCTTCCT AGCAGACCGCAACTCGCCGCTTTACCGCAACAGCGTCGTCGGCGAGGTGATCGTTCCCTATCTTGCCCGGCTGAAAGCCT CGATCGCTTGCTGGGAAAACCGCATCGGGTTCGTGGAGCAGTTCCGCATCTCCCGCGCCGAAAGCGGCTTTCCCGTCTAC CAGAACGTGTTGGAGCTCGAGAACGATCGGCGCGACGCGGAAAAGCGGCTCGCGAGCATTCCGTCCGCCGATGCATTGCG CGACGAAATGGTCGATTTCATCCTGAGGCAGAAGGCGTTCCCGGAGGCGCTTCAGGTCCGCATGGCCGAAAGGCTCTATC TGGAGCAGATCGGCAAGGGCGACATCTTCTCGCCCTTCGTCCTGCCGGAGACGATCCGGGTTGCCGTCAACCCGAAAACG ATGCGGCCCTATTACGTCGTCTCCTGGGGCGCATTCGACGGGAGTCAAACCCTGCCGATGGTCTATATGGCGACGATCGA AGATTCCTCCGAAAACGTGATTGAAATGCTGGTGACGGAGGATGGCAAGCTCAATCCGGGCGTCGAGATTCCGTTGCCGG TCGGCGGCCTGCTCAATCCGCAGCTCGCAAGCCGTTTCGACGATTTCGCCTCCAAGAACAGCGCCTATTCGCTGACGCCG GTGACCATCGCCACCAATCTCGACAAGGATTTCACGGAACTGCATCCAAAACAGCTTCGACGCATCGTGCTTGGCCCCTT CTATTCGGCGGGCATCACCGAGAACAATGCACGGATCAACGACATTCTCTCCCGGGTGCGAAAGAGTGAAAATGCCTGGC TGCTCACCTGGACCGTGCAGGAGGTCTTCTCCAAGGCCGAGCGGCCGGCGAAGAACGGCTTCTGGTCCTCTACGCCGGCG CAGGAGGAGTTTCACATCGAGACCTCCGATCTCGAGGCGGCGCGCATGGGCGTGAGCGCCTATGAGAAGCACGCCCTGGT CCCCCACGACGCCTATCAGGCGCTCTATGCCTCCGGCGAGGCCGCCCAGGTCTTCGGCGATTACAAGGTGCATGTCATTT CCGGCAACCAGGTGGTGAGCGAGGTTTAG
Upstream 100 bases:
>100_bases ATGGACAAGCACAACGCCGCAAATTACGTGAAGCAGTGATCGGCAAGGCGGCGATGACCCGATTTCCGACCGGCTTTCGG CCTTTGCCGGGAGAGTTGCC
Downstream 100 bases:
>100_bases GCCATGGCGTTGAACACAGGGCTGACGACCCTGCATGAGGATGAGATCGCAAAACATCAGGCGGTCGCGCAGAGCCTCGT CAGCAAACTGGCCATTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MNTAISPAVRQYFGSIRAALAGLELFLADRNSPLYRNSVVGEVIVPYLARLKASIACWENRIGFVEQFRISRAESGFPVY QNVLELENDRRDAEKRLASIPSADALRDEMVDFILRQKAFPEALQVRMAERLYLEQIGKGDIFSPFVLPETIRVAVNPKT MRPYYVVSWGAFDGSQTLPMVYMATIEDSSENVIEMLVTEDGKLNPGVEIPLPVGGLLNPQLASRFDDFASKNSAYSLTP VTIATNLDKDFTELHPKQLRRIVLGPFYSAGITENNARINDILSRVRKSENAWLLTWTVQEVFSKAERPAKNGFWSSTPA QEEFHIETSDLEAARMGVSAYEKHALVPHDAYQALYASGEAAQVFGDYKVHVISGNQVVSEV
Sequences:
>Translated_382_residues MNTAISPAVRQYFGSIRAALAGLELFLADRNSPLYRNSVVGEVIVPYLARLKASIACWENRIGFVEQFRISRAESGFPVY QNVLELENDRRDAEKRLASIPSADALRDEMVDFILRQKAFPEALQVRMAERLYLEQIGKGDIFSPFVLPETIRVAVNPKT MRPYYVVSWGAFDGSQTLPMVYMATIEDSSENVIEMLVTEDGKLNPGVEIPLPVGGLLNPQLASRFDDFASKNSAYSLTP VTIATNLDKDFTELHPKQLRRIVLGPFYSAGITENNARINDILSRVRKSENAWLLTWTVQEVFSKAERPAKNGFWSSTPA QEEFHIETSDLEAARMGVSAYEKHALVPHDAYQALYASGEAAQVFGDYKVHVISGNQVVSEV >Mature_382_residues MNTAISPAVRQYFGSIRAALAGLELFLADRNSPLYRNSVVGEVIVPYLARLKASIACWENRIGFVEQFRISRAESGFPVY QNVLELENDRRDAEKRLASIPSADALRDEMVDFILRQKAFPEALQVRMAERLYLEQIGKGDIFSPFVLPETIRVAVNPKT MRPYYVVSWGAFDGSQTLPMVYMATIEDSSENVIEMLVTEDGKLNPGVEIPLPVGGLLNPQLASRFDDFASKNSAYSLTP VTIATNLDKDFTELHPKQLRRIVLGPFYSAGITENNARINDILSRVRKSENAWLLTWTVQEVFSKAERPAKNGFWSSTPA QEEFHIETSDLEAARMGVSAYEKHALVPHDAYQALYASGEAAQVFGDYKVHVISGNQVVSEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42703; Mature: 42703
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAISPAVRQYFGSIRAALAGLELFLADRNSPLYRNSVVGEVIVPYLARLKASIACWEN CCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RIGFVEQFRISRAESGFPVYQNVLELENDRRDAEKRLASIPSADALRDEMVDFILRQKAF CCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC PEALQVRMAERLYLEQIGKGDIFSPFVLPETIRVAVNPKTMRPYYVVSWGAFDGSQTLPM HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCE VYMATIEDSSENVIEMLVTEDGKLNPGVEIPLPVGGLLNPQLASRFDDFASKNSAYSLTP EEEEEECCCCHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE VTIATNLDKDFTELHPKQLRRIVLGPFYSAGITENNARINDILSRVRKSENAWLLTWTVQ EEEEECCCCHHHHCCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEHH EVFSKAERPAKNGFWSSTPAQEEFHIETSDLEAARMGVSAYEKHALVPHDAYQALYASGE HHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC AAQVFGDYKVHVISGNQVVSEV CEEEECCEEEEEEECCHHHHCC >Mature Secondary Structure MNTAISPAVRQYFGSIRAALAGLELFLADRNSPLYRNSVVGEVIVPYLARLKASIACWEN CCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RIGFVEQFRISRAESGFPVYQNVLELENDRRDAEKRLASIPSADALRDEMVDFILRQKAF CCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC PEALQVRMAERLYLEQIGKGDIFSPFVLPETIRVAVNPKTMRPYYVVSWGAFDGSQTLPM HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCE VYMATIEDSSENVIEMLVTEDGKLNPGVEIPLPVGGLLNPQLASRFDDFASKNSAYSLTP EEEEEECCCCHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE VTIATNLDKDFTELHPKQLRRIVLGPFYSAGITENNARINDILSRVRKSENAWLLTWTVQ EEEEECCCCHHHHCCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEHH EVFSKAERPAKNGFWSSTPAQEEFHIETSDLEAARMGVSAYEKHALVPHDAYQALYASGE HHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC AAQVFGDYKVHVISGNQVVSEV CEEEECCEEEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA