Click here to switch to the map view.

The map label for this gene is 150397499

Identifier: 150397499

GI number: 150397499

Start: 2377283

End: 2378503

Strand: Reverse

Name: 150397499

Synonym: Smed_2299

Alternate gene names: NA

Gene position: 2378503-2377283 (Counterclockwise)

Preceding gene: 150397500

Following gene: 229577668

Centisome position: 62.89

GC content: 62.24

Gene sequence:

>1221_bases
ATGTTCGATCCGATCGTTGCGTTCTTTCAGCGTGTATTCACGGCAATAGGCCGTGGCATCGGATTGGCGGTGGCGTGGCT
TCTCTGGCCCTTCGTCGCTCTCGGCAGCTGGTATCGCGCGCGAAGCTGGGTGATCAAGGGGCCGATCGGTCTCATCCTCC
TCTGCCTCGTGCTCTTTTACGGCTACTTTGTCTGGCAGACGCAAGCCTGGACTAATTTCAATCCGGACTATGTCGATCGC
TACAAGCTCGTCGAACGCAGGACGCCGGCCGGCTCGCCCATCAGCGGTCCAGGGGCGACGACCGGGCAGTCCGGCTCCGC
GGTCGACGCAAACCACGCCGCGGTCGCTCCCTCCGGCGCGGACAGCACGACCGAGGCCCTTGCGGTGGCGGAGCTTCCGG
CCGGGACTGTCTGCCAGACATCGGCCGTCGTCGACGTAGCGGCGGACCTCATCGAGTTCAACGTCGATCAGAATGCGTGG
ATATCGTCGATGCTGGGCTACAAGCTCGGCTTTTTCGGGGTCGACTGGGACGATACGCCCTGGCTGGACAATAAGGCATC
CTTTCAGCGCGGCATAAACCAGGCCGTTCGCCGCACGGCGGTGGAACTGGTGGATTCGCTCGGGCGCGTGCGTGGCACGT
CCGGCGTCAACAGAGAGCTGCAAAGCGCGCGCGGTAACATCCAGTTCGACGAGGAGACCTGGTATTTCGGTCTCAACCCC
TTTGGTCCCAAGACTCCGACGCCGAGCTTCTATCGGTCGGCGATGCGCGATCTCAGGACGTTCAATGTCTCGCTCAGCAA
GTGCGAAGCGGTCTTCGACGGCCGGTCCGACAACATGGTCGAGTTCCTGGACCGCGTTGCCAATGATCTCGGCAATACGT
CCGCGATCATCCGCGAGCGTTCGGAGTTCCACAATGGCGGCTGGTTCGACACGCGCGCGGACGACCGCTTCTGGTTCGCC
TTCGGGCAGCTCTATGGCTATTACGGCATCCTCTCGGCTGCCGGCGCCGATTTCGAGAATGTCGTCACGCAGCGTGGGTT
GGGGCCGATCTATACCGAAACGATGAAGCAGCTGCGCGCGGCGCTCAGGATCCAGCCGCTCATCATCTCGAACGGCCGCG
AGGACGGCTGGATCATGCCAACGCACCTCGCGACGATGGGTTTTTATATCCTGCGGGTCCGCTCCAACCTGGTGGAGATG
CGCGATATTCTTGCCCGTTGA

Upstream 100 bases:

>100_bases
AACCTTCCGCGAATATGTTGTTGCAACATTGACCGGCACATATCTCAAGGACAAGACCGCCTTCCGTCAAAAGCTCTACG
GTCTCAAAGAGGAATAAAAC

Downstream 100 bases:

>100_bases
CGGGCTTCGTGCGAGCGTAGGCAAAGGAAACGGACTTGCGGATGCCGCGGAGGAGGCGGGATGCGCAAGCAACTGGGGGA
AGCCGTGGGAGAGGTAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MFDPIVAFFQRVFTAIGRGIGLAVAWLLWPFVALGSWYRARSWVIKGPIGLILLCLVLFYGYFVWQTQAWTNFNPDYVDR
YKLVERRTPAGSPISGPGATTGQSGSAVDANHAAVAPSGADSTTEALAVAELPAGTVCQTSAVVDVAADLIEFNVDQNAW
ISSMLGYKLGFFGVDWDDTPWLDNKASFQRGINQAVRRTAVELVDSLGRVRGTSGVNRELQSARGNIQFDEETWYFGLNP
FGPKTPTPSFYRSAMRDLRTFNVSLSKCEAVFDGRSDNMVEFLDRVANDLGNTSAIIRERSEFHNGGWFDTRADDRFWFA
FGQLYGYYGILSAAGADFENVVTQRGLGPIYTETMKQLRAALRIQPLIISNGREDGWIMPTHLATMGFYILRVRSNLVEM
RDILAR

Sequences:

>Translated_406_residues
MFDPIVAFFQRVFTAIGRGIGLAVAWLLWPFVALGSWYRARSWVIKGPIGLILLCLVLFYGYFVWQTQAWTNFNPDYVDR
YKLVERRTPAGSPISGPGATTGQSGSAVDANHAAVAPSGADSTTEALAVAELPAGTVCQTSAVVDVAADLIEFNVDQNAW
ISSMLGYKLGFFGVDWDDTPWLDNKASFQRGINQAVRRTAVELVDSLGRVRGTSGVNRELQSARGNIQFDEETWYFGLNP
FGPKTPTPSFYRSAMRDLRTFNVSLSKCEAVFDGRSDNMVEFLDRVANDLGNTSAIIRERSEFHNGGWFDTRADDRFWFA
FGQLYGYYGILSAAGADFENVVTQRGLGPIYTETMKQLRAALRIQPLIISNGREDGWIMPTHLATMGFYILRVRSNLVEM
RDILAR
>Mature_406_residues
MFDPIVAFFQRVFTAIGRGIGLAVAWLLWPFVALGSWYRARSWVIKGPIGLILLCLVLFYGYFVWQTQAWTNFNPDYVDR
YKLVERRTPAGSPISGPGATTGQSGSAVDANHAAVAPSGADSTTEALAVAELPAGTVCQTSAVVDVAADLIEFNVDQNAW
ISSMLGYKLGFFGVDWDDTPWLDNKASFQRGINQAVRRTAVELVDSLGRVRGTSGVNRELQSARGNIQFDEETWYFGLNP
FGPKTPTPSFYRSAMRDLRTFNVSLSKCEAVFDGRSDNMVEFLDRVANDLGNTSAIIRERSEFHNGGWFDTRADDRFWFA
FGQLYGYYGILSAAGADFENVVTQRGLGPIYTETMKQLRAALRIQPLIISNGREDGWIMPTHLATMGFYILRVRSNLVEM
RDILAR

Specific function: Unknown

COG id: COG5345

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45193; Mature: 45193

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDPIVAFFQRVFTAIGRGIGLAVAWLLWPFVALGSWYRARSWVIKGPIGLILLCLVLFY
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCEEEECCHHHHHHHHHHHH
GYFVWQTQAWTNFNPDYVDRYKLVERRTPAGSPISGPGATTGQSGSAVDANHAAVAPSGA
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSTTEALAVAELPAGTVCQTSAVVDVAADLIEFNVDQNAWISSMLGYKLGFFGVDWDDTP
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
WLDNKASFQRGINQAVRRTAVELVDSLGRVRGTSGVNRELQSARGNIQFDEETWYFGLNP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEECCCCEEECCCC
FGPKTPTPSFYRSAMRDLRTFNVSLSKCEAVFDGRSDNMVEFLDRVANDLGNTSAIIRER
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHH
SEFHNGGWFDTRADDRFWFAFGQLYGYYGILSAAGADFENVVTQRGLGPIYTETMKQLRA
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHH
ALRIQPLIISNGREDGWIMPTHLATMGFYILRVRSNLVEMRDILAR
HHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDPIVAFFQRVFTAIGRGIGLAVAWLLWPFVALGSWYRARSWVIKGPIGLILLCLVLFY
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCEEEECCHHHHHHHHHHHH
GYFVWQTQAWTNFNPDYVDRYKLVERRTPAGSPISGPGATTGQSGSAVDANHAAVAPSGA
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSTTEALAVAELPAGTVCQTSAVVDVAADLIEFNVDQNAWISSMLGYKLGFFGVDWDDTP
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
WLDNKASFQRGINQAVRRTAVELVDSLGRVRGTSGVNRELQSARGNIQFDEETWYFGLNP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEECCCCEEECCCC
FGPKTPTPSFYRSAMRDLRTFNVSLSKCEAVFDGRSDNMVEFLDRVANDLGNTSAIIRER
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHH
SEFHNGGWFDTRADDRFWFAFGQLYGYYGILSAAGADFENVVTQRGLGPIYTETMKQLRA
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHH
ALRIQPLIISNGREDGWIMPTHLATMGFYILRVRSNLVEMRDILAR
HHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA