| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is queF [H]
Identifier: 150397493
GI number: 150397493
Start: 2368135
End: 2368599
Strand: Reverse
Name: queF [H]
Synonym: Smed_2293
Alternate gene names: 150397493
Gene position: 2368599-2368135 (Counterclockwise)
Preceding gene: 150397494
Following gene: 150397492
Centisome position: 62.63
GC content: 61.94
Gene sequence:
>465_bases ATGACGAAGACGGACGTATCAGGACTTTCCCAGCTCGGGACGAAGGTCGATCTGCCCCAGAACCCGGAAGAGGCGGTGCT CGAAAGGGTGCCGAGCGGCCATGGCGGCACCGATTTCGTCGTCCGCTTCACGGCGCCGGAGTTCACCTCTCTTTGCCCGA TGACAGGGCAGCCCGACTTCGCCCACCTCGTAATCGATTACGTGCCGGACGGCTGGCTGGTCGAGTCGAAATCTCTGAAG CTTTTCCTGCACTCCTTCCGCAATCACGGCGCTTTTCACGAGGATTGCACGATCGATATCGCCAAGCGGCTGGTTTCGCT GCTTTCGCCGAAGTGGCTTCGGATCGGCGCCTATTGGTATCCCCGCGGTGGAATTCCGATCGACGTTTTCTGGCAGACCG GAAGCCCGCCGGAAGGTGTCTGGCTGCCCGATCAGGGCGTGCCGACCTATCGCGGGCGGGGCTGA
Upstream 100 bases:
>100_bases TTCGCGCCGTGCATCCGGGTGCGAGGGTCGCCATTCACGTCGAACCGGAAGGCGAAAAGGCGCACGGCGTGCGCGTTAAA GTGAGCGGAGCATCACGGAA
Downstream 100 bases:
>100_bases CATTTGCTGAATTGCGCGGGCAGCTTCCATGATAAATCGCCAGTTTGCCGCCGAAAGGCTTCTGCCGTCGCCGCCCGCGG GTAGGGAATGGCTGTCGGTT
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTKTDVSGLSQLGTKVDLPQNPEEAVLERVPSGHGGTDFVVRFTAPEFTSLCPMTGQPDFAHLVIDYVPDGWLVESKSLK LFLHSFRNHGAFHEDCTIDIAKRLVSLLSPKWLRIGAYWYPRGGIPIDVFWQTGSPPEGVWLPDQGVPTYRGRG
Sequences:
>Translated_154_residues MTKTDVSGLSQLGTKVDLPQNPEEAVLERVPSGHGGTDFVVRFTAPEFTSLCPMTGQPDFAHLVIDYVPDGWLVESKSLK LFLHSFRNHGAFHEDCTIDIAKRLVSLLSPKWLRIGAYWYPRGGIPIDVFWQTGSPPEGVWLPDQGVPTYRGRG >Mature_153_residues TKTDVSGLSQLGTKVDLPQNPEEAVLERVPSGHGGTDFVVRFTAPEFTSLCPMTGQPDFAHLVIDYVPDGWLVESKSLKL FLHSFRNHGAFHEDCTIDIAKRLVSLLSPKWLRIGAYWYPRGGIPIDVFWQTGSPPEGVWLPDQGVPTYRGRG
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016856 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 17122; Mature: 16990
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTDVSGLSQLGTKVDLPQNPEEAVLERVPSGHGGTDFVVRFTAPEFTSLCPMTGQPDF CCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHCCCCCCCCCC AHLVIDYVPDGWLVESKSLKLFLHSFRNHGAFHEDCTIDIAKRLVSLLSPKWLRIGAYWY EEEEEEECCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEE PRGGIPIDVFWQTGSPPEGVWLPDQGVPTYRGRG CCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCC >Mature Secondary Structure TKTDVSGLSQLGTKVDLPQNPEEAVLERVPSGHGGTDFVVRFTAPEFTSLCPMTGQPDF CCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHCCCCCCCCCC AHLVIDYVPDGWLVESKSLKLFLHSFRNHGAFHEDCTIDIAKRLVSLLSPKWLRIGAYWY EEEEEEECCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEE PRGGIPIDVFWQTGSPPEGVWLPDQGVPTYRGRG CCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]