| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is apt [H]
Identifier: 150397470
GI number: 150397470
Start: 2346736
End: 2347278
Strand: Reverse
Name: apt [H]
Synonym: Smed_2270
Alternate gene names: 150397470
Gene position: 2347278-2346736 (Counterclockwise)
Preceding gene: 150397472
Following gene: 150397467
Centisome position: 62.07
GC content: 60.22
Gene sequence:
>543_bases ATGACCGCTCTTCAATCGGACCTGATTTCCGCCATTCGAAGCATTCCGGACTATCCGAAACCGGGCGTCATGTTCCGCGA CATCACGACCCTGCTCGGCAACCCCAGGGCTTTCCGACGTGCCATTGACGAACTCGTCCACCCTTATGCCGGCACCAAGG TCGACAAGGTCGCGGGCATCGAGGCGCGAGGTTTTATCCTGGGCGGTGCGATCGCGCACCAGCTTTCAGCGGGTTTCATA CCCATTCGCAAAAGAGGAAAGCTTCCGCACGACACGGTGCGTATCGCCTATAGCCTTGAGTACGGCGTGGACGAAATGGA AATGCACCGGGATGCGGTCGTTCCCGGTGACAAGGTGATCCTCGTCGATGACCTGATTGCCACCGGCGGCACTGCCGAAG GCGCCGCCAAGCTTCTGCAGCAGATGGGCGCGGAGATCGTCGCTGCCTGCTTCATCATCGACCTGCCTGAGCTCGGCGGA CGCAGGAAGCTCGAGGCGCTGGGCGTCAATGTGCGTACGCTGATCGAATTCGAAGGGCATTGA
Upstream 100 bases:
>100_bases TTGTTCCCCCGGATCCCGTGCGAAGAAAATCCTGTAAACCGGTGCTTTGTTGGTGCTATGCCTGTGGCGATCGAAGATCC AGCAAAGGCCGCATTCAGAT
Downstream 100 bases:
>100_bases ACGCCTGCAGCGCCGTGCCTTTCAAGCAAATTCAATGACCTTGCTCTCGAAGCGGATAACCGGCTCGCCATGCTGGTTCT CGCCCTCGCAGAGGATAGTG
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT [H]
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTALQSDLISAIRSIPDYPKPGVMFRDITTLLGNPRAFRRAIDELVHPYAGTKVDKVAGIEARGFILGGAIAHQLSAGFI PIRKRGKLPHDTVRIAYSLEYGVDEMEMHRDAVVPGDKVILVDDLIATGGTAEGAAKLLQQMGAEIVAACFIIDLPELGG RRKLEALGVNVRTLIEFEGH
Sequences:
>Translated_180_residues MTALQSDLISAIRSIPDYPKPGVMFRDITTLLGNPRAFRRAIDELVHPYAGTKVDKVAGIEARGFILGGAIAHQLSAGFI PIRKRGKLPHDTVRIAYSLEYGVDEMEMHRDAVVPGDKVILVDDLIATGGTAEGAAKLLQQMGAEIVAACFIIDLPELGG RRKLEALGVNVRTLIEFEGH >Mature_179_residues TALQSDLISAIRSIPDYPKPGVMFRDITTLLGNPRAFRRAIDELVHPYAGTKVDKVAGIEARGFILGGAIAHQLSAGFIP IRKRGKLPHDTVRIAYSLEYGVDEMEMHRDAVVPGDKVILVDDLIATGGTAEGAAKLLQQMGAEIVAACFIIDLPELGGR RKLEALGVNVRTLIEFEGH
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4502171, Length=170, Percent_Identity=44.7058823529412, Blast_Score=150, Evalue=4e-37, Organism=Homo sapiens, GI71773201, Length=121, Percent_Identity=49.5867768595041, Blast_Score=124, Evalue=3e-29, Organism=Escherichia coli, GI1786675, Length=173, Percent_Identity=50.8670520231214, Blast_Score=192, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17509087, Length=171, Percent_Identity=43.2748538011696, Blast_Score=129, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6323619, Length=170, Percent_Identity=37.0588235294118, Blast_Score=118, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6320649, Length=164, Percent_Identity=36.5853658536585, Blast_Score=99, Evalue=3e-22, Organism=Drosophila melanogaster, GI17136334, Length=170, Percent_Identity=37.6470588235294, Blast_Score=121, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005764 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.7 [H]
Molecular weight: Translated: 19470; Mature: 19339
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALQSDLISAIRSIPDYPKPGVMFRDITTLLGNPRAFRRAIDELVHPYAGTKVDKVAGI CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCC EARGFILGGAIAHQLSAGFIPIRKRGKLPHDTVRIAYSLEYGVDEMEMHRDAVVPGDKVI CCCCEEEHHHHHHHHHCCCEEHHCCCCCCCHHEEEEEEECCCCCHHHHHHHCCCCCCCEE LVDDLIATGGTAEGAAKLLQQMGAEIVAACFIIDLPELGGRRKLEALGVNVRTLIEFEGH EEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEEEECCC >Mature Secondary Structure TALQSDLISAIRSIPDYPKPGVMFRDITTLLGNPRAFRRAIDELVHPYAGTKVDKVAGI CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCC EARGFILGGAIAHQLSAGFIPIRKRGKLPHDTVRIAYSLEYGVDEMEMHRDAVVPGDKVI CCCCEEEHHHHHHHHHCCCEEHHCCCCCCCHHEEEEEEECCCCCHHHHHHHCCCCCCCEE LVDDLIATGGTAEGAAKLLQQMGAEIVAACFIIDLPELGGRRKLEALGVNVRTLIEFEGH EEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]