| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150397418
Identifier: 150397418
GI number: 150397418
Start: 2296935
End: 2297339
Strand: Reverse
Name: 150397418
Synonym: Smed_2218
Alternate gene names: NA
Gene position: 2297339-2296935 (Counterclockwise)
Preceding gene: 150397419
Following gene: 150397417
Centisome position: 60.75
GC content: 62.96
Gene sequence:
>405_bases ATGACAGACGCCCAGACGATAGCCAGCCGTTTCATGGAAGCCCTGAACGATCGCGACTTCGACGCGCTTTCCCGCCTCGT CGACGAGGACGTTGCGTTCGACTCGCTCAGCGGAGAGCGAACCCTCGGTGCCGGCTCGCTCAGGAGCTGGATGATGAACT ATCTGCGCCATTTCGACGAGAGCTTGAGTGACATCGTGCTGATGCGAGACGCCGCCGGCCAGCGCGTGGCTGCGGACACG ACCGCGCGCGGCACTTACCGCGAGACTTTGGCCGGCTTTCCCGACGCCTCCGGTCAGGCCTATTCCATCGCGAGCGTCTT TGTCTTCGAGATCGAGGACGGCCTGATCACGCGGCTCAGCCAATATCGTAACATCCGGCTCTTCGAGCGGGAACTCGCGG GCTGA
Upstream 100 bases:
>100_bases CAGTTGAGGATCGAGGCAACCGTTCGCCGCTGCCGTTTTCTCTTTCGGCGCGGCAGGCATTCTGCGTAGAGTGGAAGCGG GGCCGGTTTCGGAGGAGAAA
Downstream 100 bases:
>100_bases ACACGATTCGTAGTGCGTGGCAGGGCGGGATCAACCTGAATACCGCATGAACGGACAGTTCCGGTGCCGTTCAGTTTGGC CGGGCTATTTTTGCCTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTDAQTIASRFMEALNDRDFDALSRLVDEDVAFDSLSGERTLGAGSLRSWMMNYLRHFDESLSDIVLMRDAAGQRVAADT TARGTYRETLAGFPDASGQAYSIASVFVFEIEDGLITRLSQYRNIRLFERELAG
Sequences:
>Translated_134_residues MTDAQTIASRFMEALNDRDFDALSRLVDEDVAFDSLSGERTLGAGSLRSWMMNYLRHFDESLSDIVLMRDAAGQRVAADT TARGTYRETLAGFPDASGQAYSIASVFVFEIEDGLITRLSQYRNIRLFERELAG >Mature_133_residues TDAQTIASRFMEALNDRDFDALSRLVDEDVAFDSLSGERTLGAGSLRSWMMNYLRHFDESLSDIVLMRDAAGQRVAADTT ARGTYRETLAGFPDASGQAYSIASVFVFEIEDGLITRLSQYRNIRLFERELAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14987; Mature: 14856
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAQTIASRFMEALNDRDFDALSRLVDEDVAFDSLSGERTLGAGSLRSWMMNYLRHFDE CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH SLSDIVLMRDAAGQRVAADTTARGTYRETLAGFPDASGQAYSIASVFVFEIEDGLITRLS HHHHHHHHHCCCCCEECCCCCCCCHHHHHHCCCCCCCCCEEEHHHHEEEHHCCHHHHHHH QYRNIRLFERELAG HHHCHHHHHHHHCC >Mature Secondary Structure TDAQTIASRFMEALNDRDFDALSRLVDEDVAFDSLSGERTLGAGSLRSWMMNYLRHFDE CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH SLSDIVLMRDAAGQRVAADTTARGTYRETLAGFPDASGQAYSIASVFVFEIEDGLITRLS HHHHHHHHHCCCCCEECCCCCCCCHHHHHHCCCCCCCCCEEEHHHHEEEHHCCHHHHHHH QYRNIRLFERELAG HHHCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA