Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397415

Identifier: 150397415

GI number: 150397415

Start: 2294701

End: 2294976

Strand: Reverse

Name: 150397415

Synonym: Smed_2215

Alternate gene names: NA

Gene position: 2294976-2294701 (Counterclockwise)

Preceding gene: 150397417

Following gene: 150397413

Centisome position: 60.68

GC content: 58.33

Gene sequence:

>276_bases
ATGCCCCGCTGGAAGAAGCCGACCAAAGAAGAAGTCCTGGAAAATCGACGCGATCTGGCGAACCGTGCGCGCAGCGGTGA
GCTGCGCTTGCCCCATGCCGTTGCTGAAATTCGCAAGGGCTTCGGCATGACGCAAGAGGAGTTTGCGAAGATGCTGGCGC
TCACCAGGAGGCAGGTTGCCGAAATCGAAGCCGGCACAGCGAACCCGACATTGGAGACATTGGAAAAAATGGCCGTCTAT
TCGGCTTTGGGGTGGGTTTCGTGCCGGGGACGATAA

Upstream 100 bases:

>100_bases
CTGCTGCGCCATTCCTGCGTTGATCGCGGCATGGGGCGCTGCGCGGAAATCGCCGAGAGCGTTCTGGTGTCGCTATCCTG
AGCCGGAACGGAGACCGCTG

Downstream 100 bases:

>100_bases
AGAAAACTGAGAGCGAGCGTGATCCGGCGCCGAAAGGCTCTCACGAACGCCCATAGCCGATCGACTGGCGTGCTGCATCG
CATTCTTCGCACGCCACTTC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MPRWKKPTKEEVLENRRDLANRARSGELRLPHAVAEIRKGFGMTQEEFAKMLALTRRQVAEIEAGTANPTLETLEKMAVY
SALGWVSCRGR

Sequences:

>Translated_91_residues
MPRWKKPTKEEVLENRRDLANRARSGELRLPHAVAEIRKGFGMTQEEFAKMLALTRRQVAEIEAGTANPTLETLEKMAVY
SALGWVSCRGR
>Mature_90_residues
PRWKKPTKEEVLENRRDLANRARSGELRLPHAVAEIRKGFGMTQEEFAKMLALTRRQVAEIEAGTANPTLETLEKMAVYS
ALGWVSCRGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10355; Mature: 10224

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRWKKPTKEEVLENRRDLANRARSGELRLPHAVAEIRKGFGMTQEEFAKMLALTRRQVA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EIEAGTANPTLETLEKMAVYSALGWVSCRGR
HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PRWKKPTKEEVLENRRDLANRARSGELRLPHAVAEIRKGFGMTQEEFAKMLALTRRQVA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EIEAGTANPTLETLEKMAVYSALGWVSCRGR
HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA