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The map label for this gene is 150397413

Identifier: 150397413

GI number: 150397413

Start: 2291664

End: 2293502

Strand: Reverse

Name: 150397413

Synonym: Smed_2213

Alternate gene names: NA

Gene position: 2293502-2291664 (Counterclockwise)

Preceding gene: 150397415

Following gene: 150397412

Centisome position: 60.64

GC content: 63.02

Gene sequence:

>1839_bases
GTGGCGGTGCCGCATTTTCATCTGCAGACATTCGGGGAATTGCGGCTGGTCGATTCCGGCGGCGTGGTCGTGGCGTGCCC
GGAGCGGGGCCTGCTTATTCTGGCCTACCTCAGCATATCCGGGCAGAGAACGGTCTCCCGCGAAAAGCTCTCGATGCTGA
TCTGGCCCGAGCGGGAGAAGAGCGTCGCTTTCAAGAACCTGCGCTCTACCCTGTGGCGCATGCGCCACCTTGCCGCGAAC
TCGGGGCCGCTCACGTCGGCGACGGAAATAGATGTGACGCTGGGGGAGATTGCCTGCGACGCCGCCGGTTTCGAGGCGCT
CGGGAGCTCGGAGGAAGCGTTTCGCGCCGGGCTCTCGCTCTGGCGCGATACGTTCCTAGCAGGCGCCGATGTGCCTCCCG
GGCGTTATGCGGACTGGGTTGGAGAGCAGCGGAGCGTGTTTACGCAAAAGCTGCGCGCGGCACTTTTAGCCGGCGGAGAG
CGATTTGCCGACAGGTCGATGCTGCGGACGGCGTGCATGCATCTCCTCGAACTCGATCCGGCGGATACTGCCGTGCGCGC
AATCCTGGAGCGGTTGACCGGCGTGGGTCTCGTCATCGGGAAAGGCTCGCCGGACGGGGCCTGGCTGCGGCAGGGGGCCT
TTGCAGGGGAGTCGCCCCGGGCGCCGGCAAGGGATGCGATAACCCCGCCGGTTGCGCCCGCACCGCGCGTTGCGCTGCTT
CCGCCCGCGGCTTTCGGCAGTGATCCGATGCTTCACGCGGTCAGCATGGCCGTGGTCGAAGACATCACGATCGGATTATG
CGCGCTGCGCTCGATGTCGGTTGTTGCCCCTTACACTGCCGAGCGTATTCGGGATGCGGCGGACAAGGCTGCCTTCCTGG
AAAAACATGCCGTCACTTATGCGCTCGACTGTCGCATGTCGGACCAGGGGCTGTTTACTCAACTCATCTTCCTGCCGTCC
GACGCGATCGTCTGGGCGGAGCGCTTTTCGATCTCTCCGGTCGGGCTCCTGCAACAGCGTCAGGAAATTGCCTTTCACGT
GGCCAGCGCGGTAGCGGAACAGGTGGAGACCGGGCGTATCGGGCACCTCGATTACGTGACCAATCCGGACGCCTATTACG
CCTATCTCGCCGGCCTGCGAAACCTTTCGAACGTCGGCCTTCCCGAAATCCGCAGGGCACGCCGCGATTTCAAGACGGCG
CTCAGGCACAAGCCGGATTTTGCCCCGGCGCTAAGCGGCATCGCACGCACCTATGCGATCGAGTGGGTCCTGACGGCTCG
GGGCGACCAGGAGCTTTTGACGGTAGCCGAGCGTCACGCCAAGGAAGCGATCGAGAGCGATGAAGAGCTTCCCGGAGCAC
ATCGCGAATTCGGCGTCGTCAGACTTTATCAGGGCGACCTCGATGGAAGTCTTGCGGCGCTGGACCGCGCCGAAAATCTG
AGCCCGCATTATGCCGACGTGCTGTACAGCCATGCGGACACGCTCGTCCATGCCTCCCGCCCGCGTGAGGCTCTCGACAA
GCTCGGCAAGGCGCTTTCGCTTAATCCCCTGGCGCCGGACATGTATTTCTGGAGCGCTGCCGGAGCCAGCTACTTTCTCG
AAGAGTATGAGGATGCGATCGGCTACGTTCAGAAAATGAAGGACAAGTCGCCGGGCGACCGGCTGCTTGCAGCAAGCTGG
GCGATGCTCGGCGATCAGAAGAAAGCGCGGTCATACAAGGTGAAGGCCCTGAGGGCCAATCCGACATTCGATGTCGACAA
GTGGCTCGCCGTCGTTCCGATGAAGGAACAATGGCAGAAGGACCTCTATCGCGAGGGGCTGAAAAGAGCGGGGTTTTGA

Upstream 100 bases:

>100_bases
GGGGTGGAAGAGGGCTGGGTGAACGAGATTTCGATGCATTCGCCGGCGGCGGCCGGTGGTGACCTAAAATCATATTGATC
TAAAGCCGTTTGGGGTTTTC

Downstream 100 bases:

>100_bases
TGATGAGGGGAAGCGATATGGCAGAAGTCGTAGTAATTGGTATTGCCGGCGAGCAAGGTTTGTGGCTGGCGGATCTGAAA
AATGGAACGGTCAGGCCGCT

Product: SARP family transcriptional regulator

Products: NA

Alternate protein names: Adenylate Class-3/4/Guanylyl Cyclase; Transcriptional Regulator Domain Protein; Adenylyl Cyclase Class-3/4/Guanylyl Cyclase; Adenylate/Guanylate Cyclase With TPR Repeats; Trifolitoxin Related Protein; SARP Family Transcriptional Regulator; Peptide Antibiotic Resistance Protein; Transcriptional Regulator; Adenylate Cyclase Protein; CadC Family Transcriptional Regulator; Transcriptional Regulator SARP Family; Regulatory Protein; Transcriptional Regulator Domain-Containing Protein; Regulator Protein; Transcriptional Regulator CadC-Family

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MAVPHFHLQTFGELRLVDSGGVVVACPERGLLILAYLSISGQRTVSREKLSMLIWPEREKSVAFKNLRSTLWRMRHLAAN
SGPLTSATEIDVTLGEIACDAAGFEALGSSEEAFRAGLSLWRDTFLAGADVPPGRYADWVGEQRSVFTQKLRAALLAGGE
RFADRSMLRTACMHLLELDPADTAVRAILERLTGVGLVIGKGSPDGAWLRQGAFAGESPRAPARDAITPPVAPAPRVALL
PPAAFGSDPMLHAVSMAVVEDITIGLCALRSMSVVAPYTAERIRDAADKAAFLEKHAVTYALDCRMSDQGLFTQLIFLPS
DAIVWAERFSISPVGLLQQRQEIAFHVASAVAEQVETGRIGHLDYVTNPDAYYAYLAGLRNLSNVGLPEIRRARRDFKTA
LRHKPDFAPALSGIARTYAIEWVLTARGDQELLTVAERHAKEAIESDEELPGAHREFGVVRLYQGDLDGSLAALDRAENL
SPHYADVLYSHADTLVHASRPREALDKLGKALSLNPLAPDMYFWSAAGASYFLEEYEDAIGYVQKMKDKSPGDRLLAASW
AMLGDQKKARSYKVKALRANPTFDVDKWLAVVPMKEQWQKDLYREGLKRAGF

Sequences:

>Translated_612_residues
MAVPHFHLQTFGELRLVDSGGVVVACPERGLLILAYLSISGQRTVSREKLSMLIWPEREKSVAFKNLRSTLWRMRHLAAN
SGPLTSATEIDVTLGEIACDAAGFEALGSSEEAFRAGLSLWRDTFLAGADVPPGRYADWVGEQRSVFTQKLRAALLAGGE
RFADRSMLRTACMHLLELDPADTAVRAILERLTGVGLVIGKGSPDGAWLRQGAFAGESPRAPARDAITPPVAPAPRVALL
PPAAFGSDPMLHAVSMAVVEDITIGLCALRSMSVVAPYTAERIRDAADKAAFLEKHAVTYALDCRMSDQGLFTQLIFLPS
DAIVWAERFSISPVGLLQQRQEIAFHVASAVAEQVETGRIGHLDYVTNPDAYYAYLAGLRNLSNVGLPEIRRARRDFKTA
LRHKPDFAPALSGIARTYAIEWVLTARGDQELLTVAERHAKEAIESDEELPGAHREFGVVRLYQGDLDGSLAALDRAENL
SPHYADVLYSHADTLVHASRPREALDKLGKALSLNPLAPDMYFWSAAGASYFLEEYEDAIGYVQKMKDKSPGDRLLAASW
AMLGDQKKARSYKVKALRANPTFDVDKWLAVVPMKEQWQKDLYREGLKRAGF
>Mature_611_residues
AVPHFHLQTFGELRLVDSGGVVVACPERGLLILAYLSISGQRTVSREKLSMLIWPEREKSVAFKNLRSTLWRMRHLAANS
GPLTSATEIDVTLGEIACDAAGFEALGSSEEAFRAGLSLWRDTFLAGADVPPGRYADWVGEQRSVFTQKLRAALLAGGER
FADRSMLRTACMHLLELDPADTAVRAILERLTGVGLVIGKGSPDGAWLRQGAFAGESPRAPARDAITPPVAPAPRVALLP
PAAFGSDPMLHAVSMAVVEDITIGLCALRSMSVVAPYTAERIRDAADKAAFLEKHAVTYALDCRMSDQGLFTQLIFLPSD
AIVWAERFSISPVGLLQQRQEIAFHVASAVAEQVETGRIGHLDYVTNPDAYYAYLAGLRNLSNVGLPEIRRARRDFKTAL
RHKPDFAPALSGIARTYAIEWVLTARGDQELLTVAERHAKEAIESDEELPGAHREFGVVRLYQGDLDGSLAALDRAENLS
PHYADVLYSHADTLVHASRPREALDKLGKALSLNPLAPDMYFWSAAGASYFLEEYEDAIGYVQKMKDKSPGDRLLAASWA
MLGDQKKARSYKVKALRANPTFDVDKWLAVVPMKEQWQKDLYREGLKRAGF

Specific function: Unknown

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67168; Mature: 67037

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPHFHLQTFGELRLVDSGGVVVACPERGLLILAYLSISGQRTVSREKLSMLIWPEREK
CCCCCCHHHCCCCEEEEECCCEEEECCCCCEEEEEEEECCCCCHHHHHHHEEEECCCHHH
SVAFKNLRSTLWRMRHLAANSGPLTSATEIDVTLGEIACDAAGFEALGSSEEAFRAGLSL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHCHHCHHHCCCCHHHHHHHHHH
WRDTFLAGADVPPGRYADWVGEQRSVFTQKLRAALLAGGERFADRSMLRTACMHLLELDP
HHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
ADTAVRAILERLTGVGLVIGKGSPDGAWLRQGAFAGESPRAPARDAITPPVAPAPRVALL
HHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
PPAAFGSDPMLHAVSMAVVEDITIGLCALRSMSVVAPYTAERIRDAADKAAFLEKHAVTY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCEEE
ALDCRMSDQGLFTQLIFLPSDAIVWAERFSISPVGLLQQRQEIAFHVASAVAEQVETGRI
EEECCCCCCCHHEEEEECCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GHLDYVTNPDAYYAYLAGLRNLSNVGLPEIRRARRDFKTALRHKPDFAPALSGIARTYAI
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHE
EWVLTARGDQELLTVAERHAKEAIESDEELPGAHREFGVVRLYQGDLDGSLAALDRAENL
EEEEECCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCC
SPHYADVLYSHADTLVHASRPREALDKLGKALSLNPLAPDMYFWSAAGASYFLEEYEDAI
CCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEECCCCCCCHHHHHHCCHHHHHHHHHHHH
GYVQKMKDKSPGDRLLAASWAMLGDQKKARSYKVKALRANPTFDVDKWLAVVPMKEQWQK
HHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCEEEEEEECCCCCCHHHHHEECCCHHHHHH
DLYREGLKRAGF
HHHHHHHHHCCC
>Mature Secondary Structure 
AVPHFHLQTFGELRLVDSGGVVVACPERGLLILAYLSISGQRTVSREKLSMLIWPEREK
CCCCCHHHCCCCEEEEECCCEEEECCCCCEEEEEEEECCCCCHHHHHHHEEEECCCHHH
SVAFKNLRSTLWRMRHLAANSGPLTSATEIDVTLGEIACDAAGFEALGSSEEAFRAGLSL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHCHHCHHHCCCCHHHHHHHHHH
WRDTFLAGADVPPGRYADWVGEQRSVFTQKLRAALLAGGERFADRSMLRTACMHLLELDP
HHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
ADTAVRAILERLTGVGLVIGKGSPDGAWLRQGAFAGESPRAPARDAITPPVAPAPRVALL
HHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
PPAAFGSDPMLHAVSMAVVEDITIGLCALRSMSVVAPYTAERIRDAADKAAFLEKHAVTY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCEEE
ALDCRMSDQGLFTQLIFLPSDAIVWAERFSISPVGLLQQRQEIAFHVASAVAEQVETGRI
EEECCCCCCCHHEEEEECCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GHLDYVTNPDAYYAYLAGLRNLSNVGLPEIRRARRDFKTALRHKPDFAPALSGIARTYAI
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHE
EWVLTARGDQELLTVAERHAKEAIESDEELPGAHREFGVVRLYQGDLDGSLAALDRAENL
EEEEECCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCC
SPHYADVLYSHADTLVHASRPREALDKLGKALSLNPLAPDMYFWSAAGASYFLEEYEDAI
CCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEECCCCCCCHHHHHHCCHHHHHHHHHHHH
GYVQKMKDKSPGDRLLAASWAMLGDQKKARSYKVKALRANPTFDVDKWLAVVPMKEQWQK
HHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCEEEEEEECCCCCCHHHHHEECCCHHHHHH
DLYREGLKRAGF
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA