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The map label for this gene is 150397383

Identifier: 150397383

GI number: 150397383

Start: 2256125

End: 2256919

Strand: Reverse

Name: 150397383

Synonym: Smed_2182

Alternate gene names: NA

Gene position: 2256919-2256125 (Counterclockwise)

Preceding gene: 150397386

Following gene: 150397373

Centisome position: 59.68

GC content: 61.13

Gene sequence:

>795_bases
TTGCCGCAGGACGATATATTCGCGACCAATCTGCGTTTCGCCTGTGCGACGCGGCGCTCGATCTCGCAGGTCTGCCGCGA
GATCGGCATAAATCGCCAGCAGTTCAATCGATATATCAGCGGTGAAGCGCGGCCCTCGGCCCATAATGTTGCGCGGATCG
CGGCCTTCTTCGGCCTTTCGGCCGATGATTTTTTGCTGCCGCCAAAACTCTTCGAGGCCCGCATGATCCGCCCGGAGCGA
CACCGCCTGGAAGCGGGGCAGCTTCTCGAGGGGTTCCCGGGCGATGCCGCAGCCCTTCGCCGTCATTTCGGCTACTACCA
GACCTATCATCTTTCGCTCTCCTGGCCCGGTTTCGTCGTCTGTTCCTGCGCGCATATCTATGAGGAAGGCGGCTCGATCC
GGGTAAAATCGATCGAGCGCATACGCGACAGGGCGAACGAGATCGAGCAGTTCTCAAAATATGTCGGACTTGTCACCTTC
TGGCGAAACCGCATTTTCATTGCCGAGCGCACCGTGGGGCAGGCGGCGATGCTGGCGCAGACGATCCTGATGCCGTTCGA
GTTGCACCAGCGGGTCTATCTGCGCGGCACGACGATGGGGGTTTCATGGCGCAAGGAGAACCTGCCCTACGCATCGCGGA
TGATCTGGCGGCATATCGGTCAGGATCCGGACAAGCGTCAGATGCTTTCGCGTTGCGGGCTGGTGCCGTTTGGCGCGCGG
CATCTGCCGTCCGCGGTGAGACGCTTTCTCGAGGTGCCCGAGGCCGAGGTGCTGACCATTCCGGCGGAGTATTAG

Upstream 100 bases:

>100_bases
GAGGAAATCTAGCGCCTGCCGGGCGCCAGACAATTTCGCGACTTGACGCTGGTTTTCGCTGCTTTACGCTATCGGCGAAC
CGGGACTGGAACCACCGACC

Downstream 100 bases:

>100_bases
AGCGGGATGAGAAAAAGCGTGCGCGGTTTTCCGCCCGCATTCCGCTCTTTGGAAGCGATCACGTTCATGTTTCCAGGTCG
ACCCGACCTAAAAACATCGT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Cro/CI Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MPQDDIFATNLRFACATRRSISQVCREIGINRQQFNRYISGEARPSAHNVARIAAFFGLSADDFLLPPKLFEARMIRPER
HRLEAGQLLEGFPGDAAALRRHFGYYQTYHLSLSWPGFVVCSCAHIYEEGGSIRVKSIERIRDRANEIEQFSKYVGLVTF
WRNRIFIAERTVGQAAMLAQTILMPFELHQRVYLRGTTMGVSWRKENLPYASRMIWRHIGQDPDKRQMLSRCGLVPFGAR
HLPSAVRRFLEVPEAEVLTIPAEY

Sequences:

>Translated_264_residues
MPQDDIFATNLRFACATRRSISQVCREIGINRQQFNRYISGEARPSAHNVARIAAFFGLSADDFLLPPKLFEARMIRPER
HRLEAGQLLEGFPGDAAALRRHFGYYQTYHLSLSWPGFVVCSCAHIYEEGGSIRVKSIERIRDRANEIEQFSKYVGLVTF
WRNRIFIAERTVGQAAMLAQTILMPFELHQRVYLRGTTMGVSWRKENLPYASRMIWRHIGQDPDKRQMLSRCGLVPFGAR
HLPSAVRRFLEVPEAEVLTIPAEY
>Mature_263_residues
PQDDIFATNLRFACATRRSISQVCREIGINRQQFNRYISGEARPSAHNVARIAAFFGLSADDFLLPPKLFEARMIRPERH
RLEAGQLLEGFPGDAAALRRHFGYYQTYHLSLSWPGFVVCSCAHIYEEGGSIRVKSIERIRDRANEIEQFSKYVGLVTFW
RNRIFIAERTVGQAAMLAQTILMPFELHQRVYLRGTTMGVSWRKENLPYASRMIWRHIGQDPDKRQMLSRCGLVPFGARH
LPSAVRRFLEVPEAEVLTIPAEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30418; Mature: 30287

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQDDIFATNLRFACATRRSISQVCREIGINRQQFNRYISGEARPSAHNVARIAAFFGLS
CCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
ADDFLLPPKLFEARMIRPERHRLEAGQLLEGFPGDAAALRRHFGYYQTYHLSLSWPGFVV
CCCCCCCHHHHHHHCCCCHHHHCCHHHHHHCCCCCHHHHHHHCCCEEEEEEEECCCHHHH
CSCAHIYEEGGSIRVKSIERIRDRANEIEQFSKYVGLVTFWRNRIFIAERTVGQAAMLAQ
HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHH
TILMPFELHQRVYLRGTTMGVSWRKENLPYASRMIWRHIGQDPDKRQMLSRCGLVPFGAR
HHHHHHHHHCEEEEEECEECCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHH
HLPSAVRRFLEVPEAEVLTIPAEY
HHHHHHHHHHHCCCCEEEEECCCC
>Mature Secondary Structure 
PQDDIFATNLRFACATRRSISQVCREIGINRQQFNRYISGEARPSAHNVARIAAFFGLS
CCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
ADDFLLPPKLFEARMIRPERHRLEAGQLLEGFPGDAAALRRHFGYYQTYHLSLSWPGFVV
CCCCCCCHHHHHHHCCCCHHHHCCHHHHHHCCCCCHHHHHHHCCCEEEEEEEECCCHHHH
CSCAHIYEEGGSIRVKSIERIRDRANEIEQFSKYVGLVTFWRNRIFIAERTVGQAAMLAQ
HHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHH
TILMPFELHQRVYLRGTTMGVSWRKENLPYASRMIWRHIGQDPDKRQMLSRCGLVPFGAR
HHHHHHHHHCEEEEEECEECCEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHH
HLPSAVRRFLEVPEAEVLTIPAEY
HHHHHHHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA