Click here to switch to the map view.

The map label for this gene is malT [C]

Identifier: 150397367

GI number: 150397367

Start: 2236676

End: 2237419

Strand: Reverse

Name: malT [C]

Synonym: Smed_2166

Alternate gene names: 150397367

Gene position: 2237419-2236676 (Counterclockwise)

Preceding gene: 150397373

Following gene: 150397366

Centisome position: 59.16

GC content: 61.69

Gene sequence:

>744_bases
ATGGATGACGAGGCTGTCGGGGATACGTTCCGAACTCTGATGTCCACCCTGATGACGTTCGATTATGTCGTCGTCTTCGC
GTATCGCGGCAAGGAACGGCCGCTCGATCTGTACAGCACCTTCGACGCCGAGGATCATGTGCTCTTCGTGACCCTCTACC
AGGCCGGGCCTTACCTGCTCGACCCGTTCTATCATGCCGCGCGTGCGCCCAAACCCGGCGTGTGGCGCATGCGGGAACTG
GCTCCCGACCGCTTCTTTTCAAGCGAATATTACCGGACCTATTATGTCCAGACGGGGCTTGCCGAGGAAGTCGGCTTCTT
CGTTCCCGTCAGTGAACAGGTCACCGTCGTCCTTTCTTTGATGCGGCGCGAGGCGACGGGGGTATTCGGCGCCGCGGAGT
TCGCGCTGCTCAGGAAGGCGGAGCCGCTGGTGGCGGCCCTCGTGCGGCATCATTGGGCGGAACTCGACCGCCGCTTCGAT
ACCGCGCTTGCAAGAACGGAGAGGGGCCGCCGCAAATCGGTGCATCCGCCGGCAGACGGCGTCTGGCGGCATCTCAATCT
CACAGAGCGCGAGGCGGCGATCATCGAACTCGTGCTGCAGGGGCATTCCTCCGAATCGATCGGACTGAAGCTCGGGATCT
CGACGGGGACCGTGAAAGTCCACCGCCGCAACGTCTACCGGAAGCTCGGCATTTCCTCGCAGACACAGCTCCTGTCTCTC
TACATCAAGAATCTCGGTCACTGA

Upstream 100 bases:

>100_bases
GAGTATACCCCAGGACGACGGAACGAGCCGGGAGAACCGTTTGCGCATCGACCTCGACAGCTTCTTTCAAGCCGTGGCGC
CCCTGGTGAGCGGCGCCCGG

Downstream 100 bases:

>100_bases
TCATCCCCGCCTTGCCGGGATCTTCCGCGAACGTATCCGTCGATGCGTCCGCGTTTTTTCGACATGCGGTCGATCGAGGC
TTGACAATTTTTTCAACCCA

Product: response regulator receiver protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MDDEAVGDTFRTLMSTLMTFDYVVVFAYRGKERPLDLYSTFDAEDHVLFVTLYQAGPYLLDPFYHAARAPKPGVWRMREL
APDRFFSSEYYRTYYVQTGLAEEVGFFVPVSEQVTVVLSLMRREATGVFGAAEFALLRKAEPLVAALVRHHWAELDRRFD
TALARTERGRRKSVHPPADGVWRHLNLTEREAAIIELVLQGHSSESIGLKLGISTGTVKVHRRNVYRKLGISSQTQLLSL
YIKNLGH

Sequences:

>Translated_247_residues
MDDEAVGDTFRTLMSTLMTFDYVVVFAYRGKERPLDLYSTFDAEDHVLFVTLYQAGPYLLDPFYHAARAPKPGVWRMREL
APDRFFSSEYYRTYYVQTGLAEEVGFFVPVSEQVTVVLSLMRREATGVFGAAEFALLRKAEPLVAALVRHHWAELDRRFD
TALARTERGRRKSVHPPADGVWRHLNLTEREAAIIELVLQGHSSESIGLKLGISTGTVKVHRRNVYRKLGISSQTQLLSL
YIKNLGH
>Mature_247_residues
MDDEAVGDTFRTLMSTLMTFDYVVVFAYRGKERPLDLYSTFDAEDHVLFVTLYQAGPYLLDPFYHAARAPKPGVWRMREL
APDRFFSSEYYRTYYVQTGLAEEVGFFVPVSEQVTVVLSLMRREATGVFGAAEFALLRKAEPLVAALVRHHWAELDRRFD
TALARTERGRRKSVHPPADGVWRHLNLTEREAAIIELVLQGHSSESIGLKLGISTGTVKVHRRNVYRKLGISSQTQLLSL
YIKNLGH

Specific function: Positively Regulates The Transcription Of The Maltose Regulon Whose Gene Products Are Responsible For Uptake And Catabolism Of Malto-Oligosaccharides. Binds And Recognizes A DNA Motif (Called The Malt Box): 5'-Gga[Tg]Ga-3'. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 28169; Mature: 28169

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDEAVGDTFRTLMSTLMTFDYVVVFAYRGKERPLDLYSTFDAEDHVLFVTLYQAGPYLL
CCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHCCCCCCCCEEEEEEECCCCCCC
DPFYHAARAPKPGVWRMRELAPDRFFSSEYYRTYYVQTGLAEEVGFFVPVSEQVTVVLSL
CHHHHHHCCCCCCCHHHHHHCCHHHCCCCHHEEEEEECCCHHHCCEEEECCHHHHHHHHH
MRREATGVFGAAEFALLRKAEPLVAALVRHHWAELDRRFDTALARTERGRRKSVHPPADG
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
VWRHLNLTEREAAIIELVLQGHSSESIGLKLGISTGTVKVHRRNVYRKLGISSQTQLLSL
HEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEHHHHHHHHHCCCCHHHHHHH
YIKNLGH
HHHHHCC
>Mature Secondary Structure
MDDEAVGDTFRTLMSTLMTFDYVVVFAYRGKERPLDLYSTFDAEDHVLFVTLYQAGPYLL
CCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHCCCCCCCCEEEEEEECCCCCCC
DPFYHAARAPKPGVWRMRELAPDRFFSSEYYRTYYVQTGLAEEVGFFVPVSEQVTVVLSL
CHHHHHHCCCCCCCHHHHHHCCHHHCCCCHHEEEEEECCCHHHCCEEEECCHHHHHHHHH
MRREATGVFGAAEFALLRKAEPLVAALVRHHWAELDRRFDTALARTERGRRKSVHPPADG
HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
VWRHLNLTEREAAIIELVLQGHSSESIGLKLGISTGTVKVHRRNVYRKLGISSQTQLLSL
HEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEHHHHHHHHHCCCCHHHHHHH
YIKNLGH
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7789814 [H]