Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397344

Identifier: 150397344

GI number: 150397344

Start: 2211507

End: 2213453

Strand: Reverse

Name: 150397344

Synonym: Smed_2143

Alternate gene names: NA

Gene position: 2213453-2211507 (Counterclockwise)

Preceding gene: 150397345

Following gene: 150397343

Centisome position: 58.53

GC content: 58.55

Gene sequence:

>1947_bases
ATGTCCTTGCCCCAAAACAAGGCCGCCGAAGTCAAGCCACGCGCCTTCGAGCGTTTTGTGCCTGTCGACCACACTCGCGT
AGCCTTTGATGGCGGGTTCTGGCAGAGTTGGTCGGAAACCGTCCGAAGCGTCACTATACCCACTCAGCACAGGCGCCTCG
AAGAGGAGGGCTTCCTCGAAGTCCTGGATTTCGAAAAGCCGCCGTCACCACTCGTCCGCCCTATCCAGCCCAGCGGACTG
TCGATGCAACATTTCTTCGACTCTGACTTCGGCAAATGGATTGAGGCTGCGAGCTATACGCTCAAGAACCATCCTGATCC
GGACATTGAAGCCAAGATCGATGCGATCGTGGAAAGGCTGGAGCACGGACAGATGCCAGATGGCTATCTGAACAGCTGGT
TCATCCGGCGCGAACCGGACAAGCGCTGGACCAACCTGCGCGACCTGCATGAAATGTATTCGATGGGCCATCTGATCGAG
GGAGCCGTGGCCTATTTCGAGGCTACCGGAAAACGGCGGTTCCTGGACGTGATGATCCGTGCCGTCGATCACATCATCGA
CACTTTCGGGACGGAGCCGGGCAAACTGCGCGGCTACGATGCCCATGAGGAAGTCGAACTGGCGCTTGTGAAGCTTTATC
GCTTAACCGGCGACCCCAGGCACCTGAAACTCGCTACCTATTTCGTCGACGAGCGCGGCCGAATGCCGTCCTACTTCGAC
GAGGAAACGCGCCGGCGGGGGGAGAATCCGGCCGATTATGTCTACGGGACCTATGCCTACAGTCAGGCGCACATGCCCGT
CCGCAATCAGACGCAAGTCGTTGGCCATGCCGTGCGAGCTATGTATCTCTTCTCAGCGATGGCGGACCTAGCCTATGAAA
ATGACGATCCTAGCCTAAAGCACGCCTGCGACCGCCTGTTCGACAATCTGATAGGCCGTCAGCTTTACATAACCGGAGGT
CTCGGGCCATCCGCATCCAACGAAGGCTTCACGCGCGAATATGATCTGCCGAACACGACGGCCTATGCGGAGACATGTGC
CGCGGTCGCGCTTGGTCTGTGGAGCCATCGCATGGCGCAGCTTGACCTGGACAGCAAGTTCACCGACGCCCTGGAAACAA
TTCTATTCAACGGCGCGCTTTCTGGAATTTCGCGAGACGGTGAGCACTATTTCTACGAGAACGTGCTCGAAAGCCACGGC
CAGCATCGCCGCTGGAAATGGCATTACTGCCCATGCTGCCCGACGAACATCGCCCGCTTCATAACGTCGCTGGGCCAGTA
CTTCTATTCTGCAAAGCGGGACGAAATCGCTGTCCACCTCTACGGTGCCAACACAGCCGAGCTGGAAATCCAGGGCCAAT
TCGTGCGACTTCGGCAAGAAACCAGCTATCCGTGGGATAAGGATGTTCTTCTCGCCCTTGGTCTGGTTGCGCCGACCCGG
CTCACCTTCAGGCTGCGAATCCCTGGCTGGTGCCGTAACGCCCGGTTGTGGGTAAACGGAGAGCAAATGGACCTCGGCGC
ATCGCTTGAAAAGGGCTATGCGGTCGTGAACCGCGAATGGGTCGACGGGGATGAAATCCGTCTGACTTTCGAGATGCCAG
TGGAGCGCCTCTACGCCCATCCAGCAGTAGGGGAGGACGCGCAGCGTGTCGCTCTTAAGCGCGGTCCGGTCGTCTATTGC
GTCGAGGAGACGGACATTGGCACGGAACCCCAGCGCCTGAGAATCTCAGCGGACACCAACCTCACCCCGCGCTTCGACGA
AACCCTGCTTGGCGGTGCCGTCGTGCTTGAGGGAGAAGCATTGGAAGCCGATGCCGAGGATTGGGGGCCAACGCTCTATT
GCAACAGGCCACCTTCCTTGAAGGGAAGAACGTTCAAGGCGATACCCTATCACCTCTGGGCCAATCGTGACGAGGGCGCA
ATGCAGGTCTGGCTGACGGAGAAGTAG

Upstream 100 bases:

>100_bases
TCCCTGCATCGTGCTGTTTCTCGCCTTGCAACGCTACTACGTGCGCGGTCTGACGGCCGGCGCAGTGAAATAATCCGCGG
CATCTGCAGAAGGAGTTTGC

Downstream 100 bases:

>100_bases
GAGGAAAGAATGGCACGGCTCCAACTCAGAAACGTAGTCAAATCATACGGAATCCACGAGGCCGTGCGGGGCGTCAGCCT
CGACATCGACGATAAGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 648; Mature: 647

Protein sequence:

>648_residues
MSLPQNKAAEVKPRAFERFVPVDHTRVAFDGGFWQSWSETVRSVTIPTQHRRLEEEGFLEVLDFEKPPSPLVRPIQPSGL
SMQHFFDSDFGKWIEAASYTLKNHPDPDIEAKIDAIVERLEHGQMPDGYLNSWFIRREPDKRWTNLRDLHEMYSMGHLIE
GAVAYFEATGKRRFLDVMIRAVDHIIDTFGTEPGKLRGYDAHEEVELALVKLYRLTGDPRHLKLATYFVDERGRMPSYFD
EETRRRGENPADYVYGTYAYSQAHMPVRNQTQVVGHAVRAMYLFSAMADLAYENDDPSLKHACDRLFDNLIGRQLYITGG
LGPSASNEGFTREYDLPNTTAYAETCAAVALGLWSHRMAQLDLDSKFTDALETILFNGALSGISRDGEHYFYENVLESHG
QHRRWKWHYCPCCPTNIARFITSLGQYFYSAKRDEIAVHLYGANTAELEIQGQFVRLRQETSYPWDKDVLLALGLVAPTR
LTFRLRIPGWCRNARLWVNGEQMDLGASLEKGYAVVNREWVDGDEIRLTFEMPVERLYAHPAVGEDAQRVALKRGPVVYC
VEETDIGTEPQRLRISADTNLTPRFDETLLGGAVVLEGEALEADAEDWGPTLYCNRPPSLKGRTFKAIPYHLWANRDEGA
MQVWLTEK

Sequences:

>Translated_648_residues
MSLPQNKAAEVKPRAFERFVPVDHTRVAFDGGFWQSWSETVRSVTIPTQHRRLEEEGFLEVLDFEKPPSPLVRPIQPSGL
SMQHFFDSDFGKWIEAASYTLKNHPDPDIEAKIDAIVERLEHGQMPDGYLNSWFIRREPDKRWTNLRDLHEMYSMGHLIE
GAVAYFEATGKRRFLDVMIRAVDHIIDTFGTEPGKLRGYDAHEEVELALVKLYRLTGDPRHLKLATYFVDERGRMPSYFD
EETRRRGENPADYVYGTYAYSQAHMPVRNQTQVVGHAVRAMYLFSAMADLAYENDDPSLKHACDRLFDNLIGRQLYITGG
LGPSASNEGFTREYDLPNTTAYAETCAAVALGLWSHRMAQLDLDSKFTDALETILFNGALSGISRDGEHYFYENVLESHG
QHRRWKWHYCPCCPTNIARFITSLGQYFYSAKRDEIAVHLYGANTAELEIQGQFVRLRQETSYPWDKDVLLALGLVAPTR
LTFRLRIPGWCRNARLWVNGEQMDLGASLEKGYAVVNREWVDGDEIRLTFEMPVERLYAHPAVGEDAQRVALKRGPVVYC
VEETDIGTEPQRLRISADTNLTPRFDETLLGGAVVLEGEALEADAEDWGPTLYCNRPPSLKGRTFKAIPYHLWANRDEGA
MQVWLTEK
>Mature_647_residues
SLPQNKAAEVKPRAFERFVPVDHTRVAFDGGFWQSWSETVRSVTIPTQHRRLEEEGFLEVLDFEKPPSPLVRPIQPSGLS
MQHFFDSDFGKWIEAASYTLKNHPDPDIEAKIDAIVERLEHGQMPDGYLNSWFIRREPDKRWTNLRDLHEMYSMGHLIEG
AVAYFEATGKRRFLDVMIRAVDHIIDTFGTEPGKLRGYDAHEEVELALVKLYRLTGDPRHLKLATYFVDERGRMPSYFDE
ETRRRGENPADYVYGTYAYSQAHMPVRNQTQVVGHAVRAMYLFSAMADLAYENDDPSLKHACDRLFDNLIGRQLYITGGL
GPSASNEGFTREYDLPNTTAYAETCAAVALGLWSHRMAQLDLDSKFTDALETILFNGALSGISRDGEHYFYENVLESHGQ
HRRWKWHYCPCCPTNIARFITSLGQYFYSAKRDEIAVHLYGANTAELEIQGQFVRLRQETSYPWDKDVLLALGLVAPTRL
TFRLRIPGWCRNARLWVNGEQMDLGASLEKGYAVVNREWVDGDEIRLTFEMPVERLYAHPAVGEDAQRVALKRGPVVYCV
EETDIGTEPQRLRISADTNLTPRFDETLLGGAVVLEGEALEADAEDWGPTLYCNRPPSLKGRTFKAIPYHLWANRDEGAM
QVWLTEK

Specific function: Unknown

COG id: COG3533

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74150; Mature: 74019

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPQNKAAEVKPRAFERFVPVDHTRVAFDGGFWQSWSETVRSVTIPTQHRRLEEEGFLE
CCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHEECCCHHHHHCCCCCCEE
VLDFEKPPSPLVRPIQPSGLSMQHFFDSDFGKWIEAASYTLKNHPDPDIEAKIDAIVERL
EECCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
EHGQMPDGYLNSWFIRREPDKRWTNLRDLHEMYSMGHLIEGAVAYFEATGKRRFLDVMIR
HCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AVDHIIDTFGTEPGKLRGYDAHEEVELALVKLYRLTGDPRHLKLATYFVDERGRMPSYFD
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCC
EETRRRGENPADYVYGTYAYSQAHMPVRNQTQVVGHAVRAMYLFSAMADLAYENDDPSLK
HHHHHCCCCCHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
HACDRLFDNLIGRQLYITGGLGPSASNEGFTREYDLPNTTAYAETCAAVALGLWSHRMAQ
HHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LDLDSKFTDALETILFNGALSGISRDGEHYFYENVLESHGQHRRWKWHYCPCCPTNIARF
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHH
ITSLGQYFYSAKRDEIAVHLYGANTAELEIQGQFVRLRQETSYPWDKDVLLALGLVAPTR
HHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEEEEEEEHHCCCCCCHHHHHHHHHCCCCE
LTFRLRIPGWCRNARLWVNGEQMDLGASLEKGYAVVNREWVDGDEIRLTFEMPVERLYAH
EEEEEECCCCCCCCEEEECCCEECCCCCHHCCEEEEEEEECCCCEEEEEEECCHHHHHCC
PAVGEDAQRVALKRGPVVYCVEETDIGTEPQRLRISADTNLTPRFDETLLGGAVVLEGEA
CCCCCHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCC
LEADAEDWGPTLYCNRPPSLKGRTFKAIPYHLWANRDEGAMQVWLTEK
CCCCHHHCCCEEEECCCCCCCCCEEEECCEEEECCCCCCCEEEEEECC
>Mature Secondary Structure 
SLPQNKAAEVKPRAFERFVPVDHTRVAFDGGFWQSWSETVRSVTIPTQHRRLEEEGFLE
CCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHEECCCHHHHHCCCCCCEE
VLDFEKPPSPLVRPIQPSGLSMQHFFDSDFGKWIEAASYTLKNHPDPDIEAKIDAIVERL
EECCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
EHGQMPDGYLNSWFIRREPDKRWTNLRDLHEMYSMGHLIEGAVAYFEATGKRRFLDVMIR
HCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AVDHIIDTFGTEPGKLRGYDAHEEVELALVKLYRLTGDPRHLKLATYFVDERGRMPSYFD
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCC
EETRRRGENPADYVYGTYAYSQAHMPVRNQTQVVGHAVRAMYLFSAMADLAYENDDPSLK
HHHHHCCCCCHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
HACDRLFDNLIGRQLYITGGLGPSASNEGFTREYDLPNTTAYAETCAAVALGLWSHRMAQ
HHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
LDLDSKFTDALETILFNGALSGISRDGEHYFYENVLESHGQHRRWKWHYCPCCPTNIARF
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHH
ITSLGQYFYSAKRDEIAVHLYGANTAELEIQGQFVRLRQETSYPWDKDVLLALGLVAPTR
HHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEEEEEEEHHCCCCCCHHHHHHHHHCCCCE
LTFRLRIPGWCRNARLWVNGEQMDLGASLEKGYAVVNREWVDGDEIRLTFEMPVERLYAH
EEEEEECCCCCCCCEEEECCCEECCCCCHHCCEEEEEEEECCCCEEEEEEECCHHHHHCC
PAVGEDAQRVALKRGPVVYCVEETDIGTEPQRLRISADTNLTPRFDETLLGGAVVLEGEA
CCCCCHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCC
LEADAEDWGPTLYCNRPPSLKGRTFKAIPYHLWANRDEGAMQVWLTEK
CCCCHHHCCCEEEECCCCCCCCCEEEECCEEEECCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA