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The map label for this gene is yurM [H]

Identifier: 150397345

GI number: 150397345

Start: 2213481

End: 2214347

Strand: Reverse

Name: yurM [H]

Synonym: Smed_2144

Alternate gene names: 150397345

Gene position: 2214347-2213481 (Counterclockwise)

Preceding gene: 150397346

Following gene: 150397344

Centisome position: 58.55

GC content: 56.98

Gene sequence:

>867_bases
ATGAGAAAACTAACCACGCTGCACGGCCGCCCGGCGTCGGAACGTCTCGGCGACGCAGCCCTCCTTTTGATTTCGCTGCT
GCTTGCGATCTTTTTCCTGATGCCTATCGTCTGGTCGGTAGCCAACTCCTTCAAACCGGCGGCCGAAGCGCTCGCCAATC
CCGTCGCGCTGTTTTCAAAGGCGTTTTCGCTGGAGAACTACCGAAGGCTGGAAGATGTCGGTGCTGGCTGGTACGTGTAT
GCGGCCAACTCGGTGCTTATCGCATTGGGCACGATCGTCCTCACGGTGCTGATCGCGGTCCCGGCCGGATACGGGTTCGC
CAAGTTCCGGTTCCCCGGTCAGTCGCTCATTTTCGTCGTCGTGATGGCGACGATGATGATCCCCTTCCAGTCAATCCTGA
CACCTCTCTTCCTGATCCTGAAGTTCCTCGGTTTGCAGAACAACCTGTTCGGCCTGGTCCTCGTCTACACGACATTTCAG
CTGCCATTCTCCATCTTCATGATGCGCAATTCATTCGATGCGATCCCGAGCGCATTGATCGAAGCGGCACGGATCGATGG
CGCGTCGCAATGGGCGCTTCTTCGACGGATTATGATGCCTTTGGCGCTCCCAGGCGTAGCGACCGTGGCAATGTTCGCCT
TCCTTAATTCCTGGAACGAATTTCTGGCGGCGCTGATCTTTCTGTCGGACCAGAACAAGTTCACCCTGCCGATCATGCTA
GTCAATGTTTCCTCCGGCATTTACGGGATCATTGACTGGGGCGCACTCCAGGCCGGAATCACCGTCACGATGTTTCCCTG
CATCGTGCTGTTTCTCGCCTTGCAACGCTACTACGTGCGCGGTCTGACGGCCGGCGCAGTGAAATAA

Upstream 100 bases:

>100_bases
TCGGCTACGGCTCGGCTCTCTCCTTTGCCCTGCTCGTCGTCCTCGTCGCGATCAGCTCCATTCAGCTCAGCTTCATGCGC
CAGCGTCCGGAGGAGGGTCG

Downstream 100 bases:

>100_bases
TCCGCGGCATCTGCAGAAGGAGTTTGCATGTCCTTGCCCCAAAACAAGGCCGCCGAAGTCAAGCCACGCGCCTTCGAGCG
TTTTGTGCCTGTCGACCACA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRKLTTLHGRPASERLGDAALLLISLLLAIFFLMPIVWSVANSFKPAAEALANPVALFSKAFSLENYRRLEDVGAGWYVY
AANSVLIALGTIVLTVLIAVPAGYGFAKFRFPGQSLIFVVVMATMMIPFQSILTPLFLILKFLGLQNNLFGLVLVYTTFQ
LPFSIFMMRNSFDAIPSALIEAARIDGASQWALLRRIMMPLALPGVATVAMFAFLNSWNEFLAALIFLSDQNKFTLPIML
VNVSSGIYGIIDWGALQAGITVTMFPCIVLFLALQRYYVRGLTAGAVK

Sequences:

>Translated_288_residues
MRKLTTLHGRPASERLGDAALLLISLLLAIFFLMPIVWSVANSFKPAAEALANPVALFSKAFSLENYRRLEDVGAGWYVY
AANSVLIALGTIVLTVLIAVPAGYGFAKFRFPGQSLIFVVVMATMMIPFQSILTPLFLILKFLGLQNNLFGLVLVYTTFQ
LPFSIFMMRNSFDAIPSALIEAARIDGASQWALLRRIMMPLALPGVATVAMFAFLNSWNEFLAALIFLSDQNKFTLPIML
VNVSSGIYGIIDWGALQAGITVTMFPCIVLFLALQRYYVRGLTAGAVK
>Mature_288_residues
MRKLTTLHGRPASERLGDAALLLISLLLAIFFLMPIVWSVANSFKPAAEALANPVALFSKAFSLENYRRLEDVGAGWYVY
AANSVLIALGTIVLTVLIAVPAGYGFAKFRFPGQSLIFVVVMATMMIPFQSILTPLFLILKFLGLQNNLFGLVLVYTTFQ
LPFSIFMMRNSFDAIPSALIEAARIDGASQWALLRRIMMPLALPGVATVAMFAFLNSWNEFLAALIFLSDQNKFTLPIML
VNVSSGIYGIIDWGALQAGITVTMFPCIVLFLALQRYYVRGLTAGAVK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=265, Percent_Identity=31.3207547169811, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1790464, Length=216, Percent_Identity=29.6296296296296, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789860, Length=236, Percent_Identity=26.271186440678, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1787368, Length=140, Percent_Identity=27.1428571428571, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31621; Mature: 31621

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLTTLHGRPASERLGDAALLLISLLLAIFFLMPIVWSVANSFKPAAEALANPVALFSK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AFSLENYRRLEDVGAGWYVYAANSVLIALGTIVLTVLIAVPAGYGFAKFRFPGQSLIFVV
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
VMATMMIPFQSILTPLFLILKFLGLQNNLFGLVLVYTTFQLPFSIFMMRNSFDAIPSALI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAARIDGASQWALLRRIMMPLALPGVATVAMFAFLNSWNEFLAALIFLSDQNKFTLPIML
HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
VNVSSGIYGIIDWGALQAGITVTMFPCIVLFLALQRYYVRGLTAGAVK
EEECCCCEEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRKLTTLHGRPASERLGDAALLLISLLLAIFFLMPIVWSVANSFKPAAEALANPVALFSK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AFSLENYRRLEDVGAGWYVYAANSVLIALGTIVLTVLIAVPAGYGFAKFRFPGQSLIFVV
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
VMATMMIPFQSILTPLFLILKFLGLQNNLFGLVLVYTTFQLPFSIFMMRNSFDAIPSALI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAARIDGASQWALLRRIMMPLALPGVATVAMFAFLNSWNEFLAALIFLSDQNKFTLPIML
HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
VNVSSGIYGIIDWGALQAGITVTMFPCIVLFLALQRYYVRGLTAGAVK
EEECCCCEEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]