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The map label for this gene is dadA

Identifier: 150397294

GI number: 150397294

Start: 2152980

End: 2154230

Strand: Reverse

Name: dadA

Synonym: Smed_2093

Alternate gene names: 150397294

Gene position: 2154230-2152980 (Counterclockwise)

Preceding gene: 150397295

Following gene: 150397293

Centisome position: 56.96

GC content: 64.51

Gene sequence:

>1251_bases
ATGAAAGTCATCGTTCTCGGCGCCGGCATCATCGGCGTCACATCGGCCTATCAGCTCTCCAGGGCGGGACACGAAGTGAC
GGTCATCGATCGTCAGCCGGGCCCGGCACTTGAGACCAGCTTTGCCAATGCCGGCGAAGTCTCCTTCGGCTATTGTTCCC
CTTGGGCTGCGCCCGGCATTCCGATGAAGGCGCTGAAATGGCTCTTCATGCAGCACGCGCCGCTGATCCTTCGCCCCAGG
ATCGATGCGGCCATGCTCAGCTGGATGGCGAAAATGCTCTCCAATTGCACCTCCCGGCGTTATGCGGTCAACAAGAGCCG
CATGCTGCGGCTTGCCGACTACAGCCGCACGTCGCTCGCTGCCCTGCGCGAGGAGACGGCAATCACCTATGACGAGCGAA
TGCAAGGCACGCTGCAATTGTTTCGCACCGAGGCGCAGCTCGACGCGTCGGCCAAGGACATCAGCGCGCTCGCCGCCGAC
GGTATCCCCTACGAGGTGCTCGACCGCGACGGCTGCATCCGTGCGGAGCCGGCGCTGGGGCGCGTGCGCGACAAGATCGT
CGGCGGCCTGCTAACGCCGCAGGACGAAACCGGCGACTGCTTCAAATTCGCTAATGCGCTGGCGGGGAGGGCGGAAAAAC
TCGGCGTTTGCTTCGATTACGGCACGGAGATCAGGGCGCTGGAAGTCGATGGCGGCCGGGTGCACGGCGTCGTCACCTCC
AAGGGACGGCGCGCCGCCGATGCGGTGGTGGTCGCACTCGGCAGCTATTCGCCGCTGCTCGTGCGGCGCTTCGGCATTCG
CCTGCCGGTCTATCCGGTAAAGGGCTACTCGCTGACCATTCCGATTGCGGACGCTTCGCGCGCACCGGTATCGACGGTGA
TGGACGAAACCTACAAGATTGCCATCACCCGCCTCGGCGATCGCATCCGCGTCGGAGGCATGGCCGAGATCTCCGGCTAT
ACCAACGACCTCGGCATTGCGCGCCGACGCACGCTGGAACATTCGGTCATGGACCTGTTCCCGGGCGGCGATGCCGCGAA
GGGCTCCTTCTGGTCCGGGCTGCGTCCGATGACGCCCGACGGCACGCCGGTGATTGGCCCGACCAGGATCGCCGGGCTCT
TCCTTAATACCGGTCACGGCACTCTGGGTTGGACGATGAGTTCCGGATCGGCCCGCGTGATCGCCGATCTCGTCAGCGAC
CGCAAGCTGGAGATCGATGCCACCGATCTCGCCATTGCCAGGTATGGCTAA

Upstream 100 bases:

>100_bases
CGCCGTCGCCGGGCTCCTTTGCATCCGAGCGCATGGGCTGAAGCGCCCGTCGAGCCGGAGCCGCAGCGCCACAACCGTTC
GCCTTGATTTCGGGTACATC

Downstream 100 bases:

>100_bases
GCGACTCCAGCGCGAGCAGCATTCGTAGCCCCCCAAAACACGAGGACGACATGACACTTCAGCTCCCGAATGATCCGGCC
CGTAGCGATGTGCTTTCAGC

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKVIVLGAGIIGVTSAYQLSRAGHEVTVIDRQPGPALETSFANAGEVSFGYCSPWAAPGIPMKALKWLFMQHAPLILRPR
IDAAMLSWMAKMLSNCTSRRYAVNKSRMLRLADYSRTSLAALREETAITYDERMQGTLQLFRTEAQLDASAKDISALAAD
GIPYEVLDRDGCIRAEPALGRVRDKIVGGLLTPQDETGDCFKFANALAGRAEKLGVCFDYGTEIRALEVDGGRVHGVVTS
KGRRAADAVVVALGSYSPLLVRRFGIRLPVYPVKGYSLTIPIADASRAPVSTVMDETYKIAITRLGDRIRVGGMAEISGY
TNDLGIARRRTLEHSVMDLFPGGDAAKGSFWSGLRPMTPDGTPVIGPTRIAGLFLNTGHGTLGWTMSSGSARVIADLVSD
RKLEIDATDLAIARYG

Sequences:

>Translated_416_residues
MKVIVLGAGIIGVTSAYQLSRAGHEVTVIDRQPGPALETSFANAGEVSFGYCSPWAAPGIPMKALKWLFMQHAPLILRPR
IDAAMLSWMAKMLSNCTSRRYAVNKSRMLRLADYSRTSLAALREETAITYDERMQGTLQLFRTEAQLDASAKDISALAAD
GIPYEVLDRDGCIRAEPALGRVRDKIVGGLLTPQDETGDCFKFANALAGRAEKLGVCFDYGTEIRALEVDGGRVHGVVTS
KGRRAADAVVVALGSYSPLLVRRFGIRLPVYPVKGYSLTIPIADASRAPVSTVMDETYKIAITRLGDRIRVGGMAEISGY
TNDLGIARRRTLEHSVMDLFPGGDAAKGSFWSGLRPMTPDGTPVIGPTRIAGLFLNTGHGTLGWTMSSGSARVIADLVSD
RKLEIDATDLAIARYG
>Mature_416_residues
MKVIVLGAGIIGVTSAYQLSRAGHEVTVIDRQPGPALETSFANAGEVSFGYCSPWAAPGIPMKALKWLFMQHAPLILRPR
IDAAMLSWMAKMLSNCTSRRYAVNKSRMLRLADYSRTSLAALREETAITYDERMQGTLQLFRTEAQLDASAKDISALAAD
GIPYEVLDRDGCIRAEPALGRVRDKIVGGLLTPQDETGDCFKFANALAGRAEKLGVCFDYGTEIRALEVDGGRVHGVVTS
KGRRAADAVVVALGSYSPLLVRRFGIRLPVYPVKGYSLTIPIADASRAPVSTVMDETYKIAITRLGDRIRVGGMAEISGY
TNDLGIARRRTLEHSVMDLFPGGDAAKGSFWSGLRPMTPDGTPVIGPTRIAGLFLNTGHGTLGWTMSSGSARVIADLVSD
RKLEIDATDLAIARYG

Specific function: Oxidative deamination of D-amino acids

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=416, Percent_Identity=54.8076923076923, Blast_Score=461, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA_SINMW (A6UB96)

Other databases:

- EMBL:   CP000738
- RefSeq:   YP_001327761.1
- ProteinModelPortal:   A6UB96
- STRING:   A6UB96
- GeneID:   5322953
- GenomeReviews:   CP000738_GR
- KEGG:   smd:Smed_2093
- eggNOG:   COG0665
- HOGENOM:   HBG729204
- OMA:   WQMLQNC
- ProtClustDB:   PRK00711
- BioCyc:   SMED366394:SMED_2093-MONOMER
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 44828; Mature: 44828

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIVLGAGIIGVTSAYQLSRAGHEVTVIDRQPGPALETSFANAGEVSFGYCSPWAAPGI
CEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCCCCCCEECCCCCCCCCCC
PMKALKWLFMQHAPLILRPRIDAAMLSWMAKMLSNCTSRRYAVNKSRMLRLADYSRTSLA
CHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHEECCHHHEEEEECCCHHHHH
ALREETAITYDERMQGTLQLFRTEAQLDASAKDISALAADGIPYEVLDRDGCIRAEPALG
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCEECCCCHH
RVRDKIVGGLLTPQDETGDCFKFANALAGRAEKLGVCFDYGTEIRALEVDGGRVHGVVTS
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHEEEEEECCCEEEEEEECCCEEEEEEEC
KGRRAADAVVVALGSYSPLLVRRFGIRLPVYPVKGYSLTIPIADASRAPVSTVMDETYKI
CCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCEEEEEEECCCCCCCHHHHHCCCEEE
AITRLGDRIRVGGMAEISGYTNDLGIARRRTLEHSVMDLFPGGDAAKGSFWSGLRPMTPD
EEEECCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC
GTPVIGPTRIAGLFLNTGHGTLGWTMSSGSARVIADLVSDRKLEIDATDLAIARYG
CCCCCCCHHEEEEEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEECCEEEEEECC
>Mature Secondary Structure
MKVIVLGAGIIGVTSAYQLSRAGHEVTVIDRQPGPALETSFANAGEVSFGYCSPWAAPGI
CEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCCCCCCEECCCCCCCCCCC
PMKALKWLFMQHAPLILRPRIDAAMLSWMAKMLSNCTSRRYAVNKSRMLRLADYSRTSLA
CHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHEECCHHHEEEEECCCHHHHH
ALREETAITYDERMQGTLQLFRTEAQLDASAKDISALAADGIPYEVLDRDGCIRAEPALG
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCEECCCCHH
RVRDKIVGGLLTPQDETGDCFKFANALAGRAEKLGVCFDYGTEIRALEVDGGRVHGVVTS
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHEEEEEECCCEEEEEEECCCEEEEEEEC
KGRRAADAVVVALGSYSPLLVRRFGIRLPVYPVKGYSLTIPIADASRAPVSTVMDETYKI
CCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCEEEEEEECCCCCCCHHHHHCCCEEE
AITRLGDRIRVGGMAEISGYTNDLGIARRRTLEHSVMDLFPGGDAAKGSFWSGLRPMTPD
EEEECCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC
GTPVIGPTRIAGLFLNTGHGTLGWTMSSGSARVIADLVSDRKLEIDATDLAIARYG
CCCCCCCHHEEEEEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA