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The map label for this gene is yidJ [C]

Identifier: 150397269

GI number: 150397269

Start: 2119512

End: 2120987

Strand: Reverse

Name: yidJ [C]

Synonym: Smed_2068

Alternate gene names: 150397269

Gene position: 2120987-2119512 (Counterclockwise)

Preceding gene: 150397271

Following gene: 150397261

Centisome position: 56.08

GC content: 56.64

Gene sequence:

>1476_bases
TTGCGAGCCATATTTGTATTGTTCGATTCACTGAACCGCACTGCCGTGGGCCGCTACGGTGCGAACGCGGTCAAAACGCC
CAACTTCGATCGGTTTGCAGAACGCGCGACCACATTCGACAGTCACTTCGTCGGCAGTCTTCCCTGCATGCCGGCTCGTC
GGGATTTGCACACGGGCCGCCTGAACTTCATGCATCGAAGCTGGGGGCCGCTGGAGCCGTTCGACAATTCCTTCCCGGAG
CTGCTGGGCAAGTGCGGCGTTCACTCGCACCTGATCACCGACCACCTTCATTATTTCGAGGATGGCGGCTCGACCTATCA
TACCCGGTTCCGCACATGGGATTTCATCCGCGGACAGGAAGACGACCCCTGGAAAGCGATGGTGCAGCCGCCACTCGAGC
GCTTCAAGGAAATGTATTCGGAGAAGCATTATGACTTTGATGATCCGTGGAAGCGCATGCAGAGCGCGGTCAATCGCGAA
TTCGTTCGTGGCGAGCACGAGTATCCGGGTCCCCGCTGCTTTAAGTCCGCTTTGGAATTCCTGGATCTGAACCGAGCAGC
AGACGACTGGTTCCTGATGGTCGAATGCTTCGATCCCCATGAGCCATTCGCCGCGCCGGAGCGGTTCAAGGAGCAATACG
CTACGGGATGGGAGGGCGGTGTTCTCGACTGGCCGAAATATGAGAAAGTCGTCGACAGCCCGGAGGAAATTGCGGAAATA
CGCGCCAACTATGCCGCCTTGGTAACAATGTGCGACGAATACTTCGGGCGCCTGCTCGACTATTTTGACGAGCACGACCT
TTGGAAAGACACAGCGATCATCCTGTCCACCGATCACGGATTCCTTCTTGCCGAGCACGACTGGTGGGGCAAGAATCGGA
TGCCTTACTATGCCGAAATTTCCCAGATTCCACTCATCATTTACCATCCGGAGCATGCCGGAGGAGGCGGGACGCGACGT
TCGGCGCTTACGCAGACCATCGATCTGATGCCGACCTTCCTCGATCTCTTCGGCATCGATGTGCCGCAGGAAGTGCAGGG
ACATTCCCTCCTACCCCTGTTGAAGGAGGATAGATCGATGCGGGACGTTGCCATTTTCGGCGTATTCGGCGGCCCCATCG
GATCAACCGACGGCAGGTACACTTATTACCTGTATCCCGAAGACCTCTATGGTCCCGACCTCCACGAGTACACTCTCATG
CCAATGCATATGACTTCATTGTTCACCCCGGAGGAACTGAAGACGTCGGCACTTACGGCTGGTTTCAATTTCACCAAGAA
TATGCCAGTCCTTCGGATCGATGCGCTGCGAGATGCGCGACGAATCCCCAACAATGATCGGGTCGGGTGGTCGGTGGACC
TTGGAACGAACCTTGTACGATCTTCATCTGGACCGAACGCAGATGCGGCCCTTCCGGGATTCGGAGATAGAGCTCCGCCT
GTCCGAGGGAATCCGGAGTGTGCTTATCGCCCATGA

Upstream 100 bases:

>100_bases
CCATAACAAATCCGTATCGATTCTCGCAGAAAAGGAATTTTAGCATATGGCGCCAGCACGGTACATTTGAATTGGGAACT
TGAAGAGGAGCTTGACGCGG

Downstream 100 bases:

>100_bases
CGCACCCGAAGAGTATTACCGCCGCTACGGGCTCGCCGCTATGGACGTCGGTTCATAGGCGCGGTCGACAAGATCGTCGG
ATCCGGTTGGGGGATTCTGG

Product: sulfatase

Products: NA

Alternate protein names: Cys-type sulfatase [H]

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MRAIFVLFDSLNRTAVGRYGANAVKTPNFDRFAERATTFDSHFVGSLPCMPARRDLHTGRLNFMHRSWGPLEPFDNSFPE
LLGKCGVHSHLITDHLHYFEDGGSTYHTRFRTWDFIRGQEDDPWKAMVQPPLERFKEMYSEKHYDFDDPWKRMQSAVNRE
FVRGEHEYPGPRCFKSALEFLDLNRAADDWFLMVECFDPHEPFAAPERFKEQYATGWEGGVLDWPKYEKVVDSPEEIAEI
RANYAALVTMCDEYFGRLLDYFDEHDLWKDTAIILSTDHGFLLAEHDWWGKNRMPYYAEISQIPLIIYHPEHAGGGGTRR
SALTQTIDLMPTFLDLFGIDVPQEVQGHSLLPLLKEDRSMRDVAIFGVFGGPIGSTDGRYTYYLYPEDLYGPDLHEYTLM
PMHMTSLFTPEELKTSALTAGFNFTKNMPVLRIDALRDARRIPNNDRVGWSVDLGTNLVRSSSGPNADAALPGFGDRAPP
VRGNPECAYRP

Sequences:

>Translated_491_residues
MRAIFVLFDSLNRTAVGRYGANAVKTPNFDRFAERATTFDSHFVGSLPCMPARRDLHTGRLNFMHRSWGPLEPFDNSFPE
LLGKCGVHSHLITDHLHYFEDGGSTYHTRFRTWDFIRGQEDDPWKAMVQPPLERFKEMYSEKHYDFDDPWKRMQSAVNRE
FVRGEHEYPGPRCFKSALEFLDLNRAADDWFLMVECFDPHEPFAAPERFKEQYATGWEGGVLDWPKYEKVVDSPEEIAEI
RANYAALVTMCDEYFGRLLDYFDEHDLWKDTAIILSTDHGFLLAEHDWWGKNRMPYYAEISQIPLIIYHPEHAGGGGTRR
SALTQTIDLMPTFLDLFGIDVPQEVQGHSLLPLLKEDRSMRDVAIFGVFGGPIGSTDGRYTYYLYPEDLYGPDLHEYTLM
PMHMTSLFTPEELKTSALTAGFNFTKNMPVLRIDALRDARRIPNNDRVGWSVDLGTNLVRSSSGPNADAALPGFGDRAPP
VRGNPECAYRP
>Mature_491_residues
MRAIFVLFDSLNRTAVGRYGANAVKTPNFDRFAERATTFDSHFVGSLPCMPARRDLHTGRLNFMHRSWGPLEPFDNSFPE
LLGKCGVHSHLITDHLHYFEDGGSTYHTRFRTWDFIRGQEDDPWKAMVQPPLERFKEMYSEKHYDFDDPWKRMQSAVNRE
FVRGEHEYPGPRCFKSALEFLDLNRAADDWFLMVECFDPHEPFAAPERFKEQYATGWEGGVLDWPKYEKVVDSPEEIAEI
RANYAALVTMCDEYFGRLLDYFDEHDLWKDTAIILSTDHGFLLAEHDWWGKNRMPYYAEISQIPLIIYHPEHAGGGGTRR
SALTQTIDLMPTFLDLFGIDVPQEVQGHSLLPLLKEDRSMRDVAIFGVFGGPIGSTDGRYTYYLYPEDLYGPDLHEYTLM
PMHMTSLFTPEELKTSALTAGFNFTKNMPVLRIDALRDARRIPNNDRVGWSVDLGTNLVRSSSGPNADAALPGFGDRAPP
VRGNPECAYRP

Specific function: Has sulfatase activity toward para-nitrophenyl sulfate, which is increased in presence of calcium ion [H]

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Homo sapiens, GI39930577, Length=376, Percent_Identity=25, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: =3.1.6.1 [H]

Molecular weight: Translated: 56395; Mature: 56395

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIFVLFDSLNRTAVGRYGANAVKTPNFDRFAERATTFDSHFVGSLPCMPARRDLHTGR
CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LNFMHRSWGPLEPFDNSFPELLGKCGVHSHLITDHLHYFEDGGSTYHTRFRTWDFIRGQE
CCEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEEHHHCCCC
DDPWKAMVQPPLERFKEMYSEKHYDFDDPWKRMQSAVNREFVRGEHEYPGPRCFKSALEF
CCCHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LDLNRAADDWFLMVECFDPHEPFAAPERFKEQYATGWEGGVLDWPKYEKVVDSPEEIAEI
HHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHH
RANYAALVTMCDEYFGRLLDYFDEHDLWKDTAIILSTDHGFLLAEHDWWGKNRMPYYAEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEC
SQIPLIIYHPEHAGGGGTRRSALTQTIDLMPTFLDLFGIDVPQEVQGHSLLPLLKEDRSM
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHCCCCC
RDVAIFGVFGGPIGSTDGRYTYYLYPEDLYGPDLHEYTLMPMHMTSLFTPEELKTSALTA
CEEEEEEEECCCCCCCCCEEEEEECCHHCCCCCCHHEEECHHHHHHHCCHHHHHHHHHHC
GFNFTKNMPVLRIDALRDARRIPNNDRVGWSVDLGTNLVRSSSGPNADAALPGFGDRAPP
CCCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCC
VRGNPECAYRP
CCCCCCCCCCC
>Mature Secondary Structure
MRAIFVLFDSLNRTAVGRYGANAVKTPNFDRFAERATTFDSHFVGSLPCMPARRDLHTGR
CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LNFMHRSWGPLEPFDNSFPELLGKCGVHSHLITDHLHYFEDGGSTYHTRFRTWDFIRGQE
CCEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEEHHHCCCC
DDPWKAMVQPPLERFKEMYSEKHYDFDDPWKRMQSAVNREFVRGEHEYPGPRCFKSALEF
CCCHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LDLNRAADDWFLMVECFDPHEPFAAPERFKEQYATGWEGGVLDWPKYEKVVDSPEEIAEI
HHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHH
RANYAALVTMCDEYFGRLLDYFDEHDLWKDTAIILSTDHGFLLAEHDWWGKNRMPYYAEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEC
SQIPLIIYHPEHAGGGGTRRSALTQTIDLMPTFLDLFGIDVPQEVQGHSLLPLLKEDRSM
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHCCCCC
RDVAIFGVFGGPIGSTDGRYTYYLYPEDLYGPDLHEYTLMPMHMTSLFTPEELKTSALTA
CEEEEEEEECCCCCCCCCEEEEEECCHHCCCCCCHHEEECHHHHHHHCCHHHHHHHHHHC
GFNFTKNMPVLRIDALRDARRIPNNDRVGWSVDLGTNLVRSSSGPNADAALPGFGDRAPP
CCCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCC
VRGNPECAYRP
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA