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The map label for this gene is yurM [H]

Identifier: 150397264

GI number: 150397264

Start: 2113851

End: 2114732

Strand: Direct

Name: yurM [H]

Synonym: Smed_2063

Alternate gene names: 150397264

Gene position: 2113851-2114732 (Clockwise)

Preceding gene: 150397263

Following gene: 150397265

Centisome position: 55.89

GC content: 59.64

Gene sequence:

>882_bases
ATGACCGCAGGTAGTCACGCCATAAAGGCAGAAGTAGCGACCCGTTCGAAACTCCGGCGGCGCCATAGCCTGTCCGACAT
GACGTCCGATGCCGTTCTGGTCCTGCTGCTTCTCGGTTTTGTCGCTCCGATAGTCTGGATGATCATACTCGCGTTTCAGT
CAGACCGCGCCATCATCTCAATGTTCTGGGAAATCGATCTGACACTCGACAACGTTGCCAGCATCTTGTCGCCGGCCGAA
CCTTTCCGAGCGCAGCTCGTGAACAGTATCATCGTCGTGACGGGAACGGTCGTCCTCTGCGGTGCGGCCTCTACGCTTGC
AGCCTACAGCCTGTCGAAGTTGCGCCTTTCAGGGTGGCTGAACGCGGCTGTCAACGTTTCCTGCGCCGTCGTGCCCCTTC
TGCCGCCAATGGCCCTTGTTCCGGGTTTTTACGTCACGCTCATTCAAACCGGTCTGCTCGGCTCCCTCACCGGGCTGGTG
ATCCTGAACACCATCCTCAACCTGCCCTTCGCGACGTTGCTGATGAAAATCGGCTTCGACGATATTCCCCCCGCCCTGCA
GGAAGCCGCCTCGATCGATGGTGCAAGCGAAGCGCGGACCTTCTGGATGATCATGCTGCCGCTCTCCATGCCGAGCCTGA
TCACGAGTTCACTCTTTACGGCGATCATGACGTGGAACGAGTTCCTGATGGGTCTGACGATGACTTCCGGCGGAACGACG
TCGCCGCTTTCTGTCGGCATCGCATCGCTCGTGCAGCCCTACGAGGTACGGTGGGGGCAGCTTGCCGCGGCCGGCAGCCT
CGCGGTTGTCCCGATCATGATCGCCAGCGTCGTCGCCAGCAAAAGGATTATAGCCGGCATGACACGCGGCGCGGTCAAAT
AA

Upstream 100 bases:

>100_bases
TCAGTGTGCTGATCGTCCTTCTGATGTCACTGATCATCGCGTTGGTGCTCACTGTCAGGACATTGCGTCACAGCCGGTTT
TTTATGCGTGAGGTGCAGGA

Downstream 100 bases:

>100_bases
GCCGAAATAACTGATCACAGGGAGGAACAAGATGATCAAGCCAATAATTTCTTCGCCCAGACCGCACTTGAGCAGACGGC
AGGTCTTGCAGGGCGTGGCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTAGSHAIKAEVATRSKLRRRHSLSDMTSDAVLVLLLLGFVAPIVWMIILAFQSDRAIISMFWEIDLTLDNVASILSPAE
PFRAQLVNSIIVVTGTVVLCGAASTLAAYSLSKLRLSGWLNAAVNVSCAVVPLLPPMALVPGFYVTLIQTGLLGSLTGLV
ILNTILNLPFATLLMKIGFDDIPPALQEAASIDGASEARTFWMIMLPLSMPSLITSSLFTAIMTWNEFLMGLTMTSGGTT
SPLSVGIASLVQPYEVRWGQLAAAGSLAVVPIMIASVVASKRIIAGMTRGAVK

Sequences:

>Translated_293_residues
MTAGSHAIKAEVATRSKLRRRHSLSDMTSDAVLVLLLLGFVAPIVWMIILAFQSDRAIISMFWEIDLTLDNVASILSPAE
PFRAQLVNSIIVVTGTVVLCGAASTLAAYSLSKLRLSGWLNAAVNVSCAVVPLLPPMALVPGFYVTLIQTGLLGSLTGLV
ILNTILNLPFATLLMKIGFDDIPPALQEAASIDGASEARTFWMIMLPLSMPSLITSSLFTAIMTWNEFLMGLTMTSGGTT
SPLSVGIASLVQPYEVRWGQLAAAGSLAVVPIMIASVVASKRIIAGMTRGAVK
>Mature_292_residues
TAGSHAIKAEVATRSKLRRRHSLSDMTSDAVLVLLLLGFVAPIVWMIILAFQSDRAIISMFWEIDLTLDNVASILSPAEP
FRAQLVNSIIVVTGTVVLCGAASTLAAYSLSKLRLSGWLNAAVNVSCAVVPLLPPMALVPGFYVTLIQTGLLGSLTGLVI
LNTILNLPFATLLMKIGFDDIPPALQEAASIDGASEARTFWMIMLPLSMPSLITSSLFTAIMTWNEFLMGLTMTSGGTTS
PLSVGIASLVQPYEVRWGQLAAAGSLAVVPIMIASVVASKRIIAGMTRGAVK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=278, Percent_Identity=26.978417266187, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790464, Length=227, Percent_Identity=27.3127753303965, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31016; Mature: 30885

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGSHAIKAEVATRSKLRRRHSLSDMTSDAVLVLLLLGFVAPIVWMIILAFQSDRAIIS
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEE
MFWEIDLTLDNVASILSPAEPFRAQLVNSIIVVTGTVVLCGAASTLAAYSLSKLRLSGWL
HHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
NAAVNVSCAVVPLLPPMALVPGFYVTLIQTGLLGSLTGLVILNTILNLPFATLLMKIGFD
HHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
DIPPALQEAASIDGASEARTFWMIMLPLSMPSLITSSLFTAIMTWNEFLMGLTMTSGGTT
CCCHHHHHHHCCCCCHHHHHEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
SPLSVGIASLVQPYEVRWGQLAAAGSLAVVPIMIASVVASKRIIAGMTRGAVK
CHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TAGSHAIKAEVATRSKLRRRHSLSDMTSDAVLVLLLLGFVAPIVWMIILAFQSDRAIIS
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEE
MFWEIDLTLDNVASILSPAEPFRAQLVNSIIVVTGTVVLCGAASTLAAYSLSKLRLSGWL
HHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
NAAVNVSCAVVPLLPPMALVPGFYVTLIQTGLLGSLTGLVILNTILNLPFATLLMKIGFD
HHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
DIPPALQEAASIDGASEARTFWMIMLPLSMPSLITSSLFTAIMTWNEFLMGLTMTSGGTT
CCCHHHHHHHCCCCCHHHHHEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
SPLSVGIASLVQPYEVRWGQLAAAGSLAVVPIMIASVVASKRIIAGMTRGAVK
CHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]