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The map label for this gene is 150397265

Identifier: 150397265

GI number: 150397265

Start: 2114764

End: 2116113

Strand: Direct

Name: 150397265

Synonym: Smed_2064

Alternate gene names: NA

Gene position: 2114764-2116113 (Clockwise)

Preceding gene: 150397264

Following gene: 150397266

Centisome position: 55.92

GC content: 61.11

Gene sequence:

>1350_bases
ATGATCAAGCCAATAATTTCTTCGCCCAGACCGCACTTGAGCAGACGGCAGGTCTTGCAGGGCGTGGCGGCCGCGGCCGG
TGCCGGATTGGCGGGATTTCCCGGACAGCTCGGCGCAGCAAGTCAGGTCAAGGAACTGATCGTTCTAACCGGAACCACCC
CATGGCTCCCGGCTTACCAGAAGGCCGCAGCAGCCTACGAGGCGGAGAAGGGCATCAAGATCACGTTCCGCGCATTTCCC
TATGGCGGAATGCGTACCCAGATGACCAACGCAATTCAGAGCAAGAACGCGGCCTTCGACGTCTTCCAGCTCGACGAACC
CTGGACCGGCCAGTTCTACGACAACGGATGGGTCAAACCGCTCGAGGAGATTATCGAGGGCTACAAGCTCGACCCGAACA
TTCTGACCTATGACAGCCTTCCCCTCTGGGACAAACAGCAGAGGCGCGGCAAAGCCGGCGGGAAGATCATGGGCCTGCCG
ATAAACGGCAACGTCGATCTATTCGTCTACCGAAAGGACATCTATGAGAAGCTGGGTCTGACGGTTCCGAAGACCTGGGA
TGAGGCGATCGAAAACGGCAAGAAGGCCGTCGAAGCAGGCGAAGTCCGATATGGTTATGTCACCCGTGGCCAACCCACGG
CCGGCGGGCAATCGGTCAGCTTCGAGTTCATGCACGTGCTTTACGGCTTCGGCGGCGATTGGTTCAAGGCCGACGGCGCT
ACACTCGTCCCGACAATCAACAATGACGCTGCAAAGACCGCGGCAGCGACTTTCCGCCGGCTTCTTGAGCTTGGGCCCTC
ACGGTCTCAAACGGTCGGTCAGGCGGACTGCATCGCCCTGATGCAGAGCGGCCAGGCTCTGCAGGGTCACTTCGTTGCTG
CCGGCATGCCCCAGCTCGAAGACGAGACCCGTTCATCGGTCGTCGGCAAATGCGGCTACACCATCGTTCTGGCAGGATCA
CTCGACCATCCCGTTCCGGCAAGTGGTGTCTGGTCGCTTTGCGTCCCGGCGGATCAGGCGCCCGAACGGCAGCTCGCGGC
AGCCGAGTTCATTATGTGGATGCTGGACAAGAAGCAGCAGGAAGCCTTTGCAGGCGCTGGCGGGATGCCGACCCGCAAAG
ACGTCGACGTGTCCGGAGCAGGCGCATTGCGACCGATCATGGAAGCCGCCAGGGATTCGGCGGCCCTCACGCAGGGCGCC
ATCCGCTATGTCTTCGCAGCCCAGATGCTTGAAGCCGTCGAACCGGTCATCGGTCAGATCGGCTCCGGTGACCTGGCCGT
CGACGAAGGACTGGACGAACTGCAAGCGAAACTCGCGGAGATCGCCAAGGCGAGCGGCTTCGCGAAATAG

Upstream 100 bases:

>100_bases
ATCATGATCGCCAGCGTCGTCGCCAGCAAAAGGATTATAGCCGGCATGACACGCGGCGCGGTCAAATAAGCCGAAATAAC
TGATCACAGGGAGGAACAAG

Downstream 100 bases:

>100_bases
TACAGCCAGATCCGCGGCAAGGCGGTCCGTGCTGTCACACGACAAGCGGGCCTGCCCTGCGGGTTCGGCGATCCCTTACA
AGCACATCCGACACAGCTGC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MIKPIISSPRPHLSRRQVLQGVAAAAGAGLAGFPGQLGAASQVKELIVLTGTTPWLPAYQKAAAAYEAEKGIKITFRAFP
YGGMRTQMTNAIQSKNAAFDVFQLDEPWTGQFYDNGWVKPLEEIIEGYKLDPNILTYDSLPLWDKQQRRGKAGGKIMGLP
INGNVDLFVYRKDIYEKLGLTVPKTWDEAIENGKKAVEAGEVRYGYVTRGQPTAGGQSVSFEFMHVLYGFGGDWFKADGA
TLVPTINNDAAKTAAATFRRLLELGPSRSQTVGQADCIALMQSGQALQGHFVAAGMPQLEDETRSSVVGKCGYTIVLAGS
LDHPVPASGVWSLCVPADQAPERQLAAAEFIMWMLDKKQQEAFAGAGGMPTRKDVDVSGAGALRPIMEAARDSAALTQGA
IRYVFAAQMLEAVEPVIGQIGSGDLAVDEGLDELQAKLAEIAKASGFAK

Sequences:

>Translated_449_residues
MIKPIISSPRPHLSRRQVLQGVAAAAGAGLAGFPGQLGAASQVKELIVLTGTTPWLPAYQKAAAAYEAEKGIKITFRAFP
YGGMRTQMTNAIQSKNAAFDVFQLDEPWTGQFYDNGWVKPLEEIIEGYKLDPNILTYDSLPLWDKQQRRGKAGGKIMGLP
INGNVDLFVYRKDIYEKLGLTVPKTWDEAIENGKKAVEAGEVRYGYVTRGQPTAGGQSVSFEFMHVLYGFGGDWFKADGA
TLVPTINNDAAKTAAATFRRLLELGPSRSQTVGQADCIALMQSGQALQGHFVAAGMPQLEDETRSSVVGKCGYTIVLAGS
LDHPVPASGVWSLCVPADQAPERQLAAAEFIMWMLDKKQQEAFAGAGGMPTRKDVDVSGAGALRPIMEAARDSAALTQGA
IRYVFAAQMLEAVEPVIGQIGSGDLAVDEGLDELQAKLAEIAKASGFAK
>Mature_449_residues
MIKPIISSPRPHLSRRQVLQGVAAAAGAGLAGFPGQLGAASQVKELIVLTGTTPWLPAYQKAAAAYEAEKGIKITFRAFP
YGGMRTQMTNAIQSKNAAFDVFQLDEPWTGQFYDNGWVKPLEEIIEGYKLDPNILTYDSLPLWDKQQRRGKAGGKIMGLP
INGNVDLFVYRKDIYEKLGLTVPKTWDEAIENGKKAVEAGEVRYGYVTRGQPTAGGQSVSFEFMHVLYGFGGDWFKADGA
TLVPTINNDAAKTAAATFRRLLELGPSRSQTVGQADCIALMQSGQALQGHFVAAGMPQLEDETRSSVVGKCGYTIVLAGS
LDHPVPASGVWSLCVPADQAPERQLAAAEFIMWMLDKKQQEAFAGAGGMPTRKDVDVSGAGALRPIMEAARDSAALTQGA
IRYVFAAQMLEAVEPVIGQIGSGDLAVDEGLDELQAKLAEIAKASGFAK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48088; Mature: 48088

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPIISSPRPHLSRRQVLQGVAAAAGAGLAGFPGQLGAASQVKELIVLTGTTPWLPAYQ
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCEEEEEECCCCCCHHHH
KAAAAYEAEKGIKITFRAFPYGGMRTQMTNAIQSKNAAFDVFQLDEPWTGQFYDNGWVKP
HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHH
LEEIIEGYKLDPNILTYDSLPLWDKQQRRGKAGGKIMGLPINGNVDLFVYRKDIYEKLGL
HHHHHCCCCCCCCEEEECCCCCCCHHHHCCCCCCEEEEEEECCCEEEEEEHHHHHHHHCC
TVPKTWDEAIENGKKAVEAGEVRYGYVTRGQPTAGGQSVSFEFMHVLYGFGGDWFKADGA
CCCCCHHHHHHCCHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEECCCC
TLVPTINNDAAKTAAATFRRLLELGPSRSQTVGQADCIALMQSGQALQGHFVAAGMPQLE
EEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHH
DETRSSVVGKCGYTIVLAGSLDHPVPASGVWSLCVPADQAPERQLAAAEFIMWMLDKKQQ
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
EAFAGAGGMPTRKDVDVSGAGALRPIMEAARDSAALTQGAIRYVFAAQMLEAVEPVIGQI
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSGDLAVDEGLDELQAKLAEIAKASGFAK
CCCCEEHHCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIKPIISSPRPHLSRRQVLQGVAAAAGAGLAGFPGQLGAASQVKELIVLTGTTPWLPAYQ
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCEEEEEECCCCCCHHHH
KAAAAYEAEKGIKITFRAFPYGGMRTQMTNAIQSKNAAFDVFQLDEPWTGQFYDNGWVKP
HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHH
LEEIIEGYKLDPNILTYDSLPLWDKQQRRGKAGGKIMGLPINGNVDLFVYRKDIYEKLGL
HHHHHCCCCCCCCEEEECCCCCCCHHHHCCCCCCEEEEEEECCCEEEEEEHHHHHHHHCC
TVPKTWDEAIENGKKAVEAGEVRYGYVTRGQPTAGGQSVSFEFMHVLYGFGGDWFKADGA
CCCCCHHHHHHCCHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEECCCC
TLVPTINNDAAKTAAATFRRLLELGPSRSQTVGQADCIALMQSGQALQGHFVAAGMPQLE
EEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHH
DETRSSVVGKCGYTIVLAGSLDHPVPASGVWSLCVPADQAPERQLAAAEFIMWMLDKKQQ
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
EAFAGAGGMPTRKDVDVSGAGALRPIMEAARDSAALTQGAIRYVFAAQMLEAVEPVIGQI
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSGDLAVDEGLDELQAKLAEIAKASGFAK
CCCCEEHHCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]