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The map label for this gene is mdtA [H]

Identifier: 150397235

GI number: 150397235

Start: 2084076

End: 2085287

Strand: Reverse

Name: mdtA [H]

Synonym: Smed_2034

Alternate gene names: 150397235

Gene position: 2085287-2084076 (Counterclockwise)

Preceding gene: 150397239

Following gene: 150397234

Centisome position: 55.14

GC content: 65.1

Gene sequence:

>1212_bases
ATGCGCTTTTGGAATCAGCTCGCGATCAGCGTCGTCGTCCTCGCCGTCGGGGGCGCGGCCTGGGTGCGTTTTGCACCCGG
AGCGGGCGAGACCTTGGCCGCGATCGGCGTTTCGCAGCCGTTGATCGATGCCCTGTCAGGGCCGCAGGACGGCCAAGCGG
GACGCGGCGGTTCCGGTAATGCCGGCCGCGGGCAGGGCGGACGCGGGCAGGGGGGGCTTGGCGGCTTTGCGGACGTTCCG
CTGGTCGTCGTCCGGCCGGCCGCGAGCTCACTCGTCAACGACAGACTGAATGCCATCGGCAACGGCGAAGCGATCCGTTC
GGTTACGGTTACGCCGACCGCAACCGGAAACCTCACGGAAATACTGGTAAAATCGGGTGACAGGATCGCGGAAGGCCAGG
TAATCGCCCGTCTCGACAGCGACGATCAGATGATTGCTGCCGAGCAGGCACGGTTGACCCGCGACAGCGCCCGGGAAAAA
GTCGAGCGCTACCGCAATCTCAGCACCGCGCGCGCAGTGACGGCGGTCGAAGTGCGTGACGCCGAATTTGCGCTGCAGGC
GGCCGAACTGGCGCTGAAAACGGCCGAACTCGACCTGAAGCGGCGCGATATCGCAGCGCCTTCAAAGGGCGTCGTGGGCA
TCATCACCGTCAATATAGGAGATTACGTCACGACATCGACGCCGATCGCGGTGGTTGACGACCGTTCGCAAATCCTGGTC
GATTTCTGGGTTCCAGAGCGCTTCGCGGGCAAGATCTTCGTCGATCAGCCGGTGACCGCGAACGCGATCGCGCGGCCAGC
CCGCGCACTCCAGGGCGTTGTTCATGCGATAGACAACCGCCTGGACCCGGAGAGCCGAACGCTCAGGGTCCGGGCAAGAC
TCGAGAATCCGGACGACATGCTGCGCGCCGGCATGTCCTTCTCGGTCACAGTGGCATTCGAAGGTGATCGTTATCCCACC
GTCGACCCGCTGGCGATCCAGTGGAGCTCCGAAGGATCCTTTGTCTGGCGCGTCAATGGCGACAAGAGCGAGCGTGTGCC
GATCAAAATTATCCAGCGCAACCCCGACAAGGTGCTCGTGGAAGCGGAACTCGCCGAGGGCGACCGAGTCGTCACCGAAG
GCGTGCAGCGGCTGCGCGACGGCGGCGCCGTGCGCATTGCCGGCGAGCCTGCGGCCGAGGCCGGGCAGAAGGTTGCGGGA
GACGCGCAATGA

Upstream 100 bases:

>100_bases
ATTGCCCGGCCGTCCGCAAACAAGGATAATCCGCACAAATCGGGACGTTCCATCGGGTGTGCGCACCCGTTGGAGCGCGC
TTTTCTTTTTGGAGATGTGA

Downstream 100 bases:

>100_bases
ACATCGGCATGGGAGGTCATCATCCAGGCGGTGGGCAGGGCGGAAAGACGGGCTTCACAGCGCTCTTCATCCGCCGGCCG
ATCTTCGCACTGGTGGTCAA

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Multidrug transporter mdtA [H]

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MRFWNQLAISVVVLAVGGAAWVRFAPGAGETLAAIGVSQPLIDALSGPQDGQAGRGGSGNAGRGQGGRGQGGLGGFADVP
LVVVRPAASSLVNDRLNAIGNGEAIRSVTVTPTATGNLTEILVKSGDRIAEGQVIARLDSDDQMIAAEQARLTRDSAREK
VERYRNLSTARAVTAVEVRDAEFALQAAELALKTAELDLKRRDIAAPSKGVVGIITVNIGDYVTTSTPIAVVDDRSQILV
DFWVPERFAGKIFVDQPVTANAIARPARALQGVVHAIDNRLDPESRTLRVRARLENPDDMLRAGMSFSVTVAFEGDRYPT
VDPLAIQWSSEGSFVWRVNGDKSERVPIKIIQRNPDKVLVEAELAEGDRVVTEGVQRLRDGGAVRIAGEPAAEAGQKVAG
DAQ

Sequences:

>Translated_403_residues
MRFWNQLAISVVVLAVGGAAWVRFAPGAGETLAAIGVSQPLIDALSGPQDGQAGRGGSGNAGRGQGGRGQGGLGGFADVP
LVVVRPAASSLVNDRLNAIGNGEAIRSVTVTPTATGNLTEILVKSGDRIAEGQVIARLDSDDQMIAAEQARLTRDSAREK
VERYRNLSTARAVTAVEVRDAEFALQAAELALKTAELDLKRRDIAAPSKGVVGIITVNIGDYVTTSTPIAVVDDRSQILV
DFWVPERFAGKIFVDQPVTANAIARPARALQGVVHAIDNRLDPESRTLRVRARLENPDDMLRAGMSFSVTVAFEGDRYPT
VDPLAIQWSSEGSFVWRVNGDKSERVPIKIIQRNPDKVLVEAELAEGDRVVTEGVQRLRDGGAVRIAGEPAAEAGQKVAG
DAQ
>Mature_403_residues
MRFWNQLAISVVVLAVGGAAWVRFAPGAGETLAAIGVSQPLIDALSGPQDGQAGRGGSGNAGRGQGGRGQGGLGGFADVP
LVVVRPAASSLVNDRLNAIGNGEAIRSVTVTPTATGNLTEILVKSGDRIAEGQVIARLDSDDQMIAAEQARLTRDSAREK
VERYRNLSTARAVTAVEVRDAEFALQAAELALKTAELDLKRRDIAAPSKGVVGIITVNIGDYVTTSTPIAVVDDRSQILV
DFWVPERFAGKIFVDQPVTANAIARPARALQGVVHAIDNRLDPESRTLRVRARLENPDDMLRAGMSFSVTVAFEGDRYPT
VDPLAIQWSSEGSFVWRVNGDKSERVPIKIIQRNPDKVLVEAELAEGDRVVTEGVQRLRDGGAVRIAGEPAAEAGQKVAG
DAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=364, Percent_Identity=28.2967032967033, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022824
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 42707; Mature: 42707

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFWNQLAISVVVLAVGGAAWVRFAPGAGETLAAIGVSQPLIDALSGPQDGQAGRGGSGN
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCC
AGRGQGGRGQGGLGGFADVPLVVVRPAASSLVNDRLNAIGNGEAIRSVTVTPTATGNLTE
CCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHH
ILVKSGDRIAEGQVIARLDSDDQMIAAEQARLTRDSAREKVERYRNLSTARAVTAVEVRD
HHHHCCCCEECCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEECC
AEFALQAAELALKTAELDLKRRDIAAPSKGVVGIITVNIGDYVTTSTPIAVVDDRSQILV
HHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEEEEEECCCEEECCCCEEEEECCCEEEE
DFWVPERFAGKIFVDQPVTANAIARPARALQGVVHAIDNRLDPESRTLRVRARLENPDDM
EEECCCHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHH
LRAGMSFSVTVAFEGDRYPTVDPLAIQWSSEGSFVWRVNGDKSERVPIKIIQRNPDKVLV
HHCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCEEEE
EAELAEGDRVVTEGVQRLRDGGAVRIAGEPAAEAGQKVAGDAQ
EEECCCCCHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MRFWNQLAISVVVLAVGGAAWVRFAPGAGETLAAIGVSQPLIDALSGPQDGQAGRGGSGN
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCC
AGRGQGGRGQGGLGGFADVPLVVVRPAASSLVNDRLNAIGNGEAIRSVTVTPTATGNLTE
CCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHH
ILVKSGDRIAEGQVIARLDSDDQMIAAEQARLTRDSAREKVERYRNLSTARAVTAVEVRD
HHHHCCCCEECCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEECC
AEFALQAAELALKTAELDLKRRDIAAPSKGVVGIITVNIGDYVTTSTPIAVVDDRSQILV
HHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEEEEEECCCEEECCCCEEEEECCCEEEE
DFWVPERFAGKIFVDQPVTANAIARPARALQGVVHAIDNRLDPESRTLRVRARLENPDDM
EEECCCHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHH
LRAGMSFSVTVAFEGDRYPTVDPLAIQWSSEGSFVWRVNGDKSERVPIKIIQRNPDKVLV
HHCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCEEEE
EAELAEGDRVVTEGVQRLRDGGAVRIAGEPAAEAGQKVAGDAQ
EEECCCCCHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA