| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is yeaE [H]
Identifier: 150397207
GI number: 150397207
Start: 2055970
End: 2056815
Strand: Direct
Name: yeaE [H]
Synonym: Smed_2006
Alternate gene names: 150397207
Gene position: 2055970-2056815 (Clockwise)
Preceding gene: 150397204
Following gene: 150397210
Centisome position: 54.36
GC content: 64.3
Gene sequence:
>846_bases ATGCACGATCCGATCCCGACCATCACTTTTCCGGACGGCCGCAAGGTTCCCGTGCTCGGCCAAGGCACTTGGCGAATGGG CGAAAACCGTGCCGGAGCCGCCGACGAGGTCCGCAGCCTGCAAGCGGGGCTCGATCTCGGCATGACGCTGATCGACACGG CGGAGATGTATGGCGACGGCGCCGCCGAACGCATCGTCGGAGAAGCGATCAAGGGTCGGCGGGGGGACGCCTTCCTGGTC AGCAAGGTACTGCCCTCCAATGCCAGCCGGACGGGCACGCTTGCCGCCTGCGAACGCAGCCTGCGCAATATCGGGACCGA TTGCCTCGATCTATACCTTCTGCATTGGCGTGGCGGCCATCCGCTCACCGAGACTGTGGCCGCCTTCGAAGAGCTGAAGC AGGCTGGTAAGATCCGCGCCTGGGGCGTCTCGAATTTTGACGTCGACGACATGGAGGAGCTTGCGGCCGTACCCGACGGC GGCAATGTCGCGGCCAACCAGGTGCTCTACAATCTCGCGCGCCGCGGCGTCGAATTCGACCTTCTGCCCTGGTGCCGCGG CCGCGGCGTTCCGATCATGGCCTATTCGCCGCTCGACGAGGGCCGCCTGCTCAATGATGCCGACCTTATCCACATCGCCA AGGCGCATCAGGCGACGCCCGCCCAGGTGGCGCTCGCATTTTTGAAGACGCGCTCCGGCGTCATATCGATTCCGAAGACC GGTTCCGCCGGACGCGCCCGCGAAAACCGCGACGCAATGGATATCCATCTGACGGCGGAAAATCTCGCCGAACTGGATCG TCATTTCCCGCCGCCAAAGAGGAAGACGCGGCTGGAAGTGATCTGA
Upstream 100 bases:
>100_bases ACGGAGCGTCCCGGGCCGGCCATGTTTGCGATTGCCTTATGGACTTTCAGCCAGCGGGCTTTAAATCTCGGCACTGACGC AACCTGCAGGACCATTACCG
Downstream 100 bases:
>100_bases GAAGCGACCACAGCGGCGCAGGCTCGGTGGCCCGCCTTGCCGACTGCGCTCATCCACGTCCCTATCGCGGTTGAGAGAAC CGCCTCACATCCCCTGCGGG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MHDPIPTITFPDGRKVPVLGQGTWRMGENRAGAADEVRSLQAGLDLGMTLIDTAEMYGDGAAERIVGEAIKGRRGDAFLV SKVLPSNASRTGTLAACERSLRNIGTDCLDLYLLHWRGGHPLTETVAAFEELKQAGKIRAWGVSNFDVDDMEELAAVPDG GNVAANQVLYNLARRGVEFDLLPWCRGRGVPIMAYSPLDEGRLLNDADLIHIAKAHQATPAQVALAFLKTRSGVISIPKT GSAGRARENRDAMDIHLTAENLAELDRHFPPPKRKTRLEVI
Sequences:
>Translated_281_residues MHDPIPTITFPDGRKVPVLGQGTWRMGENRAGAADEVRSLQAGLDLGMTLIDTAEMYGDGAAERIVGEAIKGRRGDAFLV SKVLPSNASRTGTLAACERSLRNIGTDCLDLYLLHWRGGHPLTETVAAFEELKQAGKIRAWGVSNFDVDDMEELAAVPDG GNVAANQVLYNLARRGVEFDLLPWCRGRGVPIMAYSPLDEGRLLNDADLIHIAKAHQATPAQVALAFLKTRSGVISIPKT GSAGRARENRDAMDIHLTAENLAELDRHFPPPKRKTRLEVI >Mature_281_residues MHDPIPTITFPDGRKVPVLGQGTWRMGENRAGAADEVRSLQAGLDLGMTLIDTAEMYGDGAAERIVGEAIKGRRGDAFLV SKVLPSNASRTGTLAACERSLRNIGTDCLDLYLLHWRGGHPLTETVAAFEELKQAGKIRAWGVSNFDVDDMEELAAVPDG GNVAANQVLYNLARRGVEFDLLPWCRGRGVPIMAYSPLDEGRLLNDADLIHIAKAHQATPAQVALAFLKTRSGVISIPKT GSAGRARENRDAMDIHLTAENLAELDRHFPPPKRKTRLEVI
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI223468663, Length=288, Percent_Identity=29.5138888888889, Blast_Score=111, Evalue=7e-25, Organism=Homo sapiens, GI310109922, Length=290, Percent_Identity=31.7241379310345, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI310109920, Length=310, Percent_Identity=30.3225806451613, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI5453543, Length=309, Percent_Identity=29.126213592233, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI45446745, Length=310, Percent_Identity=30, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI4503285, Length=310, Percent_Identity=30, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI24497577, Length=296, Percent_Identity=28.3783783783784, Blast_Score=101, Evalue=7e-22, Organism=Homo sapiens, GI5174391, Length=296, Percent_Identity=28.3783783783784, Blast_Score=101, Evalue=7e-22, Organism=Homo sapiens, GI5174695, Length=298, Percent_Identity=29.5302013422819, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI24497585, Length=294, Percent_Identity=29.5918367346939, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI24497583, Length=303, Percent_Identity=29.042904290429, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI291291012, Length=266, Percent_Identity=28.5714285714286, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI4502049, Length=292, Percent_Identity=29.7945205479452, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI300116273, Length=281, Percent_Identity=29.8932384341637, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1788081, Length=279, Percent_Identity=50.179211469534, Blast_Score=284, Evalue=6e-78, Organism=Escherichia coli, GI1786400, Length=262, Percent_Identity=31.6793893129771, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI87081735, Length=275, Percent_Identity=31.6363636363636, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1788070, Length=298, Percent_Identity=30.2013422818792, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI87082198, Length=269, Percent_Identity=29.368029739777, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787674, Length=248, Percent_Identity=28.6290322580645, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1789199, Length=325, Percent_Identity=28.9230769230769, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI48994888, Length=216, Percent_Identity=32.4074074074074, Blast_Score=76, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17561298, Length=281, Percent_Identity=32.0284697508897, Blast_Score=110, Evalue=7e-25, Organism=Caenorhabditis elegans, GI71998625, Length=286, Percent_Identity=29.020979020979, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17564128, Length=309, Percent_Identity=30.7443365695793, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17537077, Length=301, Percent_Identity=26.578073089701, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17537075, Length=300, Percent_Identity=25.6666666666667, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17552492, Length=271, Percent_Identity=27.6752767527675, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17550248, Length=303, Percent_Identity=24.0924092409241, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17561300, Length=291, Percent_Identity=26.8041237113402, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17538386, Length=282, Percent_Identity=28.3687943262411, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17537079, Length=306, Percent_Identity=25.4901960784314, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17566692, Length=305, Percent_Identity=24.5901639344262, Blast_Score=77, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6324694, Length=287, Percent_Identity=28.2229965156794, Blast_Score=102, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6320576, Length=264, Percent_Identity=29.9242424242424, Blast_Score=97, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6322556, Length=269, Percent_Identity=26.0223048327138, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320079, Length=283, Percent_Identity=25.0883392226148, Blast_Score=73, Evalue=4e-14, Organism=Drosophila melanogaster, GI24663317, Length=299, Percent_Identity=30.7692307692308, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI45553081, Length=292, Percent_Identity=27.0547945205479, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI24662789, Length=304, Percent_Identity=27.6315789473684, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI24657054, Length=295, Percent_Identity=28.4745762711864, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI20129731, Length=299, Percent_Identity=27.7591973244147, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI281366140, Length=252, Percent_Identity=26.5873015873016, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI21356425, Length=304, Percent_Identity=26.3157894736842, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI24662781, Length=296, Percent_Identity=26.6891891891892, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI24662785, Length=295, Percent_Identity=26.1016949152542, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 30536; Mature: 30536
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDPIPTITFPDGRKVPVLGQGTWRMGENRAGAADEVRSLQAGLDLGMTLIDTAEMYGDG CCCCCCCEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCC AAERIVGEAIKGRRGDAFLVSKVLPSNASRTGTLAACERSLRNIGTDCLDLYLLHWRGGH HHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEECCCC PLTETVAAFEELKQAGKIRAWGVSNFDVDDMEELAAVPDGGNVAANQVLYNLARRGVEFD CHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE LLPWCRGRGVPIMAYSPLDEGRLLNDADLIHIAKAHQATPAQVALAFLKTRSGVISIPKT ECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHCCCEEECCCC GSAGRARENRDAMDIHLTAENLAELDRHFPPPKRKTRLEVI CCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MHDPIPTITFPDGRKVPVLGQGTWRMGENRAGAADEVRSLQAGLDLGMTLIDTAEMYGDG CCCCCCCEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCC AAERIVGEAIKGRRGDAFLVSKVLPSNASRTGTLAACERSLRNIGTDCLDLYLLHWRGGH HHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEECCCC PLTETVAAFEELKQAGKIRAWGVSNFDVDDMEELAAVPDGGNVAANQVLYNLARRGVEFD CHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE LLPWCRGRGVPIMAYSPLDEGRLLNDADLIHIAKAHQATPAQVALAFLKTRSGVISIPKT ECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHCCCEEECCCC GSAGRARENRDAMDIHLTAENLAELDRHFPPPKRKTRLEVI CCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]