Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397210

Identifier: 150397210

GI number: 150397210

Start: 2059571

End: 2061559

Strand: Direct

Name: 150397210

Synonym: Smed_2009

Alternate gene names: NA

Gene position: 2059571-2061559 (Clockwise)

Preceding gene: 150397207

Following gene: 150397211

Centisome position: 54.46

GC content: 61.79

Gene sequence:

>1989_bases
ATGTTCGGTGCACAGCCTGCTGCTGATGTGGCGTTTTTCGCCCGAGGTGCTGCTTTGCTCGAGAGTGGATATCAATTGGC
GCCTCGCGCCGGCGAGATGGATCGCCGCGATGGCTTGAAGCCCGGGAATCGCTTTCTCGGCCGTGTCGTCGGCTGCAACG
GTTCGCGCGCGACGATCGCAGCCGTTGCCGAAAACGGCGAGACATCGCTTACCGAGCTCTGGTCGGTCGGCAAACTGGTC
TCGATTTCCGTCGGCTCCAACCGCGTCGTGGCCCTGGTCTACTCGATGCAGACCATTTCCGAGGGTTGGGGCGAAGAGGC
CAGTAACACTTTCCGCATCGAAGTGGAATTGATGGGCGAGGTTCAGGTCGGTCCGGATGGACGGGAAGCGTTTTCCGCCG
GCATCAGCCGCTACCCCTATCTCGGAGCTATTGCCCATCGGATCCGCGTCAGTGACCTCGCGCGCATCTACGATCCTGGT
CAATCGGACAGCTGCGTCATCGGCAAGCTCACGCAGGACGAAAGTCTCGACGCCACCATCCATGTTCCCTCGATGCTCGC
CAAACACTTCGCGATCGTCGGCACCACAGGCGTCGGCAAGTCGACGGCCGTAACGCTGCTCCTCAACAAGGCAATCGCCG
CGGACCCGAAGCTGCGCGTGCTGATTCTTGACCCGCACAACGAGTTCGCTGCTGCTTTTCCGGACCAGGCCGTGGTCATC
GACACGGATACGCTCGACCTGCCCTTCTGGTTCTTCCGGCTGGAGGAGCTAGCCGAGGTCATCTTCCGTGGACGCCCGCC
GGTGCCGGACGAACTCGACATCCTGCGTGATGTCATCGCGGATGCGAAAAGGGCGTTCAAGGGCACCGAATCCGGCCTGA
TGCGGCGGCATACGGAAAGAAGCTCGATCACGGCAGACACCCCTGTCCCCTATCGCATCGCCGATCTCCTGGCGATGATC
GATGAGCGCATCGGGCGGCTCGAGGGGCGCAACGACAAGCCGCATCTGCGCTCCCTTAAGAACAGGATCGTCTCCGCCGT
CAACGATCCGCGATACCATTTCATGTTCTCGCAGAACACGATCACGGACACGATCGAAGACACGATTGCGAGAATCTTCC
GCATCCCCGGCGACGACAGACCGATTGCCACCTTCGAGCTCGCCGGCATCCCCTCGGAGGTGGTCAATTCCCTTGCCTCC
GTGCTCTGCCGAATGGCCTTCGAGATCGGCCTCTGGGGCAACGGCGCTATCCACATGCTGGTCGTTTGTGAAGAGGCGCA
CCGCTATGTGCCGGCCGATCCCACGCTCGGTTTCCTGCCTACGCGCCAGGCCATTGCACGCATCGCCAAGGAAGGACGAA
AATACGGAGTCTCGCTCGGCATCATTACCCAGCGACCGGGCGAACTCGATCCGACGATCCTGTCGCAATGCTCGACGGTT
TTCGCCATGCGGCTCGCCAATGATCGCGACCAGGAAATCATCCGTTCGGCGATCTCCAATTCGTCGATCTCGACCACCAG
CTTCATTTCCTCTATCGGCAACGGCGAGGCGATCGCCTTCGGCGAAGCAGTCGCAGTACCGATGCGCATGCGTTTTGCGC
GGGTCGAAGACGCCCGCCTTCCCCGCGCCCACGGGATAACCGACAAGGTCGACGACGACGCGCCGCCCCTTGCCGACCTC
CGCTCGATCATCAGCCGAATGCGCGCCGTAAACGGACCTGACATATCGAGTTTCCAACAGAGCTACCTGGCCGCGCAGAC
GAAGCAGCCGCCTGTGCACGAGGAAAACGGCTTGCGGGGCAATCCGGAGATCGAACGCTTCGACCGGATTCGCGCGCAGA
TCCTTTCGGGCGATGCGGACAGGGCGTCCGATCGATCCGCAACGGCCGTAAAACAGCAGGCGGGTTTCGGCCCACCCTCC
TCATTGCGCGAAGGATCGCTGCGCGACAGTCTCCTCAAGCGGCCACTCGGCAGTCTCATTCGCAAGTAA

Upstream 100 bases:

>100_bases
CCGTCAACGTCTTTGGTGCATCCTGCCCGCCACGACCTGCGCGCAACCAGTTATTAAACCGCAGCCGCTATCCTGGGACG
CCGCATGGAAAGAGGCACCG

Downstream 100 bases:

>100_bases
AGCAAATCGCGCGAGATTGCGCGGTGCTCTGCATTTGGATCCGGAAGCTCGTCTCGCGCGTTGAAGTCGATCCGACCCTA
AATCTTCGTGATCTCATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MFGAQPAADVAFFARGAALLESGYQLAPRAGEMDRRDGLKPGNRFLGRVVGCNGSRATIAAVAENGETSLTELWSVGKLV
SISVGSNRVVALVYSMQTISEGWGEEASNTFRIEVELMGEVQVGPDGREAFSAGISRYPYLGAIAHRIRVSDLARIYDPG
QSDSCVIGKLTQDESLDATIHVPSMLAKHFAIVGTTGVGKSTAVTLLLNKAIAADPKLRVLILDPHNEFAAAFPDQAVVI
DTDTLDLPFWFFRLEELAEVIFRGRPPVPDELDILRDVIADAKRAFKGTESGLMRRHTERSSITADTPVPYRIADLLAMI
DERIGRLEGRNDKPHLRSLKNRIVSAVNDPRYHFMFSQNTITDTIEDTIARIFRIPGDDRPIATFELAGIPSEVVNSLAS
VLCRMAFEIGLWGNGAIHMLVVCEEAHRYVPADPTLGFLPTRQAIARIAKEGRKYGVSLGIITQRPGELDPTILSQCSTV
FAMRLANDRDQEIIRSAISNSSISTTSFISSIGNGEAIAFGEAVAVPMRMRFARVEDARLPRAHGITDKVDDDAPPLADL
RSIISRMRAVNGPDISSFQQSYLAAQTKQPPVHEENGLRGNPEIERFDRIRAQILSGDADRASDRSATAVKQQAGFGPPS
SLREGSLRDSLLKRPLGSLIRK

Sequences:

>Translated_662_residues
MFGAQPAADVAFFARGAALLESGYQLAPRAGEMDRRDGLKPGNRFLGRVVGCNGSRATIAAVAENGETSLTELWSVGKLV
SISVGSNRVVALVYSMQTISEGWGEEASNTFRIEVELMGEVQVGPDGREAFSAGISRYPYLGAIAHRIRVSDLARIYDPG
QSDSCVIGKLTQDESLDATIHVPSMLAKHFAIVGTTGVGKSTAVTLLLNKAIAADPKLRVLILDPHNEFAAAFPDQAVVI
DTDTLDLPFWFFRLEELAEVIFRGRPPVPDELDILRDVIADAKRAFKGTESGLMRRHTERSSITADTPVPYRIADLLAMI
DERIGRLEGRNDKPHLRSLKNRIVSAVNDPRYHFMFSQNTITDTIEDTIARIFRIPGDDRPIATFELAGIPSEVVNSLAS
VLCRMAFEIGLWGNGAIHMLVVCEEAHRYVPADPTLGFLPTRQAIARIAKEGRKYGVSLGIITQRPGELDPTILSQCSTV
FAMRLANDRDQEIIRSAISNSSISTTSFISSIGNGEAIAFGEAVAVPMRMRFARVEDARLPRAHGITDKVDDDAPPLADL
RSIISRMRAVNGPDISSFQQSYLAAQTKQPPVHEENGLRGNPEIERFDRIRAQILSGDADRASDRSATAVKQQAGFGPPS
SLREGSLRDSLLKRPLGSLIRK
>Mature_662_residues
MFGAQPAADVAFFARGAALLESGYQLAPRAGEMDRRDGLKPGNRFLGRVVGCNGSRATIAAVAENGETSLTELWSVGKLV
SISVGSNRVVALVYSMQTISEGWGEEASNTFRIEVELMGEVQVGPDGREAFSAGISRYPYLGAIAHRIRVSDLARIYDPG
QSDSCVIGKLTQDESLDATIHVPSMLAKHFAIVGTTGVGKSTAVTLLLNKAIAADPKLRVLILDPHNEFAAAFPDQAVVI
DTDTLDLPFWFFRLEELAEVIFRGRPPVPDELDILRDVIADAKRAFKGTESGLMRRHTERSSITADTPVPYRIADLLAMI
DERIGRLEGRNDKPHLRSLKNRIVSAVNDPRYHFMFSQNTITDTIEDTIARIFRIPGDDRPIATFELAGIPSEVVNSLAS
VLCRMAFEIGLWGNGAIHMLVVCEEAHRYVPADPTLGFLPTRQAIARIAKEGRKYGVSLGIITQRPGELDPTILSQCSTV
FAMRLANDRDQEIIRSAISNSSISTTSFISSIGNGEAIAFGEAVAVPMRMRFARVEDARLPRAHGITDKVDDDAPPLADL
RSIISRMRAVNGPDISSFQQSYLAAQTKQPPVHEENGLRGNPEIERFDRIRAQILSGDADRASDRSATAVKQQAGFGPPS
SLREGSLRDSLLKRPLGSLIRK

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJECL08 and MJ1429 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571
- InterPro:   IPR002789
- InterPro:   IPR018538 [H]

Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]

EC number: NA

Molecular weight: Translated: 72207; Mature: 72207

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGAQPAADVAFFARGAALLESGYQLAPRAGEMDRRDGLKPGNRFLGRVVGCNGSRATIA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHEECCCCCCEEEE
AVAENGETSLTELWSVGKLVSISVGSNRVVALVYSMQTISEGWGEEASNTFRIEVELMGE
EEECCCCHHHHHHHHCCCEEEEEECCCEEEEEEEHHHHHHHCCCCCCCCEEEEEEEEEEE
VQVGPDGREAFSAGISRYPYLGAIAHRIRVSDLARIYDPGQSDSCVIGKLTQDESLDATI
EEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEE
HVPSMLAKHFAIVGTTGVGKSTAVTLLLNKAIAADPKLRVLILDPHNEFAAAFPDQAVVI
EHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCEEEE
DTDTLDLPFWFFRLEELAEVIFRGRPPVPDELDILRDVIADAKRAFKGTESGLMRRHTER
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SSITADTPVPYRIADLLAMIDERIGRLEGRNDKPHLRSLKNRIVSAVNDPRYHFMFSQNT
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCC
ITDTIEDTIARIFRIPGDDRPIATFELAGIPSEVVNSLASVLCRMAFEIGLWGNGAIHML
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
VVCEEAHRYVPADPTLGFLPTRQAIARIAKEGRKYGVSLGIITQRPGELDPTILSQCSTV
EEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHH
FAMRLANDRDQEIIRSAISNSSISTTSFISSIGNGEAIAFGEAVAVPMRMRFARVEDARL
HHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCC
PRAHGITDKVDDDAPPLADLRSIISRMRAVNGPDISSFQQSYLAAQTKQPPVHEENGLRG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
NPEIERFDRIRAQILSGDADRASDRSATAVKQQAGFGPPSSLREGSLRDSLLKRPLGSLI
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHH
RK
CC
>Mature Secondary Structure
MFGAQPAADVAFFARGAALLESGYQLAPRAGEMDRRDGLKPGNRFLGRVVGCNGSRATIA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHEECCCCCCEEEE
AVAENGETSLTELWSVGKLVSISVGSNRVVALVYSMQTISEGWGEEASNTFRIEVELMGE
EEECCCCHHHHHHHHCCCEEEEEECCCEEEEEEEHHHHHHHCCCCCCCCEEEEEEEEEEE
VQVGPDGREAFSAGISRYPYLGAIAHRIRVSDLARIYDPGQSDSCVIGKLTQDESLDATI
EEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEE
HVPSMLAKHFAIVGTTGVGKSTAVTLLLNKAIAADPKLRVLILDPHNEFAAAFPDQAVVI
EHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCEEEE
DTDTLDLPFWFFRLEELAEVIFRGRPPVPDELDILRDVIADAKRAFKGTESGLMRRHTER
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SSITADTPVPYRIADLLAMIDERIGRLEGRNDKPHLRSLKNRIVSAVNDPRYHFMFSQNT
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCC
ITDTIEDTIARIFRIPGDDRPIATFELAGIPSEVVNSLASVLCRMAFEIGLWGNGAIHML
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
VVCEEAHRYVPADPTLGFLPTRQAIARIAKEGRKYGVSLGIITQRPGELDPTILSQCSTV
EEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHH
FAMRLANDRDQEIIRSAISNSSISTTSFISSIGNGEAIAFGEAVAVPMRMRFARVEDARL
HHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCC
PRAHGITDKVDDDAPPLADLRSIISRMRAVNGPDISSFQQSYLAAQTKQPPVHEENGLRG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
NPEIERFDRIRAQILSGDADRASDRSATAVKQQAGFGPPSSLREGSLRDSLLKRPLGSLI
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHH
RK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]