Click here to switch to the map view.

The map label for this gene is suhR [H]

Identifier: 150397195

GI number: 150397195

Start: 2045368

End: 2047260

Strand: Direct

Name: suhR [H]

Synonym: Smed_1993

Alternate gene names: 150397195

Gene position: 2045368-2047260 (Clockwise)

Preceding gene: 150397194

Following gene: 150397197

Centisome position: 54.08

GC content: 63.29

Gene sequence:

>1893_bases
ATGGCACGTACTCCCGCAAAATATTGCGATCTCGTCATGAAGGGCGGAATCACCAGCGGTATTGTCTATCCGAACGCGGT
GCTGGCGCTCGCGCGCGACTACCGGTTCAAGAACATCGGCGGCACCTCGGCCGGCGCGATCGCAGCCGCGGCCTGCTCGG
CCGCTGCGGTCGGAGACCGGTGCAAGCGGTTGAAGGTTCCGGTCGCTCAGCCGGAAGAGTTCATCGGTTTCGAAGGCCTT
GCCAGGGCTTCGGCCAATCTGTCCTCGCCCGGCTTTATCAGGAGCCTCCTCCAACCTGCGGCCGGCGCAGGTCAGGCATT
CCGCCTGCTCGTCATCTTGGCCGGCAGTGCCGGCTTTCTTCGCAAAACCCTTGCGCTTCTAGGCAGCGTCCTGCGCATCG
CACCCGTCGAGATGCTGCTGTTGTTCGCCTCCCTCGCGAGCCTTGCTTATGCTGTGGGTGGTCCGACAGGCATTTTATCC
GCCGCCCTACCGGCTGTGATCTGCGCCTATGTTGGAGGAGCGGTGTTCGCGGTGCTTCGCATCGCTCGTCTCATGCGGCG
CAATCTGATGGGTCTCTGTACCGGCAAGGCATTCCATGATCGCTCCCGTGGCCGAAACGCGGCCCTTACGGATTGGCTCC
ACGAAACCCTGCAGGCGCTTTCAGGCAAACCTTTGGATCAGCCCCTCACCTTCGGCGATCTCTGGACGGCCCCGCGCTAT
CCGGGCGAACCGGGCTCCGAGCGCGCCGTGACCCTGAAGATGATCACGACGGGCATATCGCACCAGGAGCCGCGCAGCCT
GCCCTTCGAAAGCGCGCTTTTCTGGTTTCGGCGCAGGGATTTCGACATGCTCTTCCCGAAGGCCGTCGTCGATTGGATGG
TGGAGAAGGCGCGGGATCCGGTCACTGTGGCGGGCGAGAACTACTATCTGCTCCCGCATGACGCCGATATGCCGGTGCTC
GTCGCAACGCGGATGAGCCTCAGCTTTCCCCTGCTGATCAGCGCCGTGCCGCTCTACGAGCCCGCCCGGCCCGAGAGCCC
GCCCGCAACCGAGGGGGAAGCCCGCGCTGGTCCTGATGACGTCGAAGAGAAGACAGTATTGGACAGCACGGAAGCGCTCA
CCACCGGTGGCAGGAAGCGCCGGGCGGGACCGGCCGCATTCCGGATCTGCTGGTTCTCGGACGGCGGCATAAGCAGCAAC
TTCCCGATCCACCTGTTCGACAGGGCGCTGCCCAGATGGCCCACCTTCGCCATCAATCTCGTTTATCCTACTACGTCCGA
CACGCGGCCACAGCCTGCCGTGTTCCTGCCGGAAAGCAATCGACAGGGATGGCAGCGGCACTATCAGGCGATAGCACGAA
ATTCGGCCGTCCATGAGCTCTGCGCCTTCGTGTTCGGGATCGTCGCGACGATGCAGAACTGGCGCGATCTGCTCCAGTCA
CGCGCGCCGGGCCACCGCGAACGCATCGTCCATGTTGCGTTGAGCCCGGAGGAAGGTGGACTCAACCTGGCAATGACGAA
ACAGGTTCTGGACGCCGTCTCCAAAAAGGGCACGGCCGCAGGCGAGATCTTCGCCCGGTTCTCCTTCGAGAACCACTATT
GGATCCGCTGGCGCAATCTCGCCTCGGCCCTCCAGCGCTATACGATCGACATCGCGGCGAGCGACGCCTATCAGCCGAAA
ATCCCGGATTATGAGGTCGCCTATGCCCTCGCCCGCGACGCCACGGCGACGCCGCCCTCCTATCGGTTCGCAAACAAGGC
GGAGCGCCATGAGGCGGCGCGGCTCTTCGAGCAGCTTATCAGCGAAGGGAAGATATGGAGCGAAGAAGGGCCTGACCTGA
CCAAAACCGCCCCAAGGCCGCTGCCACAATTGCAGATCGCACCGACTTATTAG

Upstream 100 bases:

>100_bases
CTGGAGGAAGCGGCACTGGATTGCCGCTGAGTTTGGGCTCAACCTCGGAAACAATGGTGGAGCAGCTCCCAGGCACCCAG
CCCGTATCAGGAGACAATCG

Downstream 100 bases:

>100_bases
AACGAGGAGCCGGCAAACCACTGAAATAAGAGACAGCGAGCCCTCATTCACCTCACGATCGTCAACCGCTCGGCCGCGCG
CGTGATCGCCGTATAGAGCC

Product: putative suppressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 630; Mature: 629

Protein sequence:

>630_residues
MARTPAKYCDLVMKGGITSGIVYPNAVLALARDYRFKNIGGTSAGAIAAAACSAAAVGDRCKRLKVPVAQPEEFIGFEGL
ARASANLSSPGFIRSLLQPAAGAGQAFRLLVILAGSAGFLRKTLALLGSVLRIAPVEMLLLFASLASLAYAVGGPTGILS
AALPAVICAYVGGAVFAVLRIARLMRRNLMGLCTGKAFHDRSRGRNAALTDWLHETLQALSGKPLDQPLTFGDLWTAPRY
PGEPGSERAVTLKMITTGISHQEPRSLPFESALFWFRRRDFDMLFPKAVVDWMVEKARDPVTVAGENYYLLPHDADMPVL
VATRMSLSFPLLISAVPLYEPARPESPPATEGEARAGPDDVEEKTVLDSTEALTTGGRKRRAGPAAFRICWFSDGGISSN
FPIHLFDRALPRWPTFAINLVYPTTSDTRPQPAVFLPESNRQGWQRHYQAIARNSAVHELCAFVFGIVATMQNWRDLLQS
RAPGHRERIVHVALSPEEGGLNLAMTKQVLDAVSKKGTAAGEIFARFSFENHYWIRWRNLASALQRYTIDIAASDAYQPK
IPDYEVAYALARDATATPPSYRFANKAERHEAARLFEQLISEGKIWSEEGPDLTKTAPRPLPQLQIAPTY

Sequences:

>Translated_630_residues
MARTPAKYCDLVMKGGITSGIVYPNAVLALARDYRFKNIGGTSAGAIAAAACSAAAVGDRCKRLKVPVAQPEEFIGFEGL
ARASANLSSPGFIRSLLQPAAGAGQAFRLLVILAGSAGFLRKTLALLGSVLRIAPVEMLLLFASLASLAYAVGGPTGILS
AALPAVICAYVGGAVFAVLRIARLMRRNLMGLCTGKAFHDRSRGRNAALTDWLHETLQALSGKPLDQPLTFGDLWTAPRY
PGEPGSERAVTLKMITTGISHQEPRSLPFESALFWFRRRDFDMLFPKAVVDWMVEKARDPVTVAGENYYLLPHDADMPVL
VATRMSLSFPLLISAVPLYEPARPESPPATEGEARAGPDDVEEKTVLDSTEALTTGGRKRRAGPAAFRICWFSDGGISSN
FPIHLFDRALPRWPTFAINLVYPTTSDTRPQPAVFLPESNRQGWQRHYQAIARNSAVHELCAFVFGIVATMQNWRDLLQS
RAPGHRERIVHVALSPEEGGLNLAMTKQVLDAVSKKGTAAGEIFARFSFENHYWIRWRNLASALQRYTIDIAASDAYQPK
IPDYEVAYALARDATATPPSYRFANKAERHEAARLFEQLISEGKIWSEEGPDLTKTAPRPLPQLQIAPTY
>Mature_629_residues
ARTPAKYCDLVMKGGITSGIVYPNAVLALARDYRFKNIGGTSAGAIAAAACSAAAVGDRCKRLKVPVAQPEEFIGFEGLA
RASANLSSPGFIRSLLQPAAGAGQAFRLLVILAGSAGFLRKTLALLGSVLRIAPVEMLLLFASLASLAYAVGGPTGILSA
ALPAVICAYVGGAVFAVLRIARLMRRNLMGLCTGKAFHDRSRGRNAALTDWLHETLQALSGKPLDQPLTFGDLWTAPRYP
GEPGSERAVTLKMITTGISHQEPRSLPFESALFWFRRRDFDMLFPKAVVDWMVEKARDPVTVAGENYYLLPHDADMPVLV
ATRMSLSFPLLISAVPLYEPARPESPPATEGEARAGPDDVEEKTVLDSTEALTTGGRKRRAGPAAFRICWFSDGGISSNF
PIHLFDRALPRWPTFAINLVYPTTSDTRPQPAVFLPESNRQGWQRHYQAIARNSAVHELCAFVFGIVATMQNWRDLLQSR
APGHRERIVHVALSPEEGGLNLAMTKQVLDAVSKKGTAAGEIFARFSFENHYWIRWRNLASALQRYTIDIAASDAYQPKI
PDYEVAYALARDATATPPSYRFANKAERHEAARLFEQLISEGKIWSEEGPDLTKTAPRPLPQLQIAPTY

Specific function: This protein is non-essential for R.meliloti growth, but induces a heat-shock response in temperature-sensitive E.coli K165 by elevating levels of sigma 32 (mechanism unknown) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 68818; Mature: 68687

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTPAKYCDLVMKGGITSGIVYPNAVLALARDYRFKNIGGTSAGAIAAAACSAAAVGDR
CCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
CKRLKVPVAQPEEFIGFEGLARASANLSSPGFIRSLLQPAAGAGQAFRLLVILAGSAGFL
HHHCCCCCCCCHHHHCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHEEEEEEEECCCHHH
RKTLALLGSVLRIAPVEMLLLFASLASLAYAVGGPTGILSAALPAVICAYVGGAVFAVLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IARLMRRNLMGLCTGKAFHDRSRGRNAALTDWLHETLQALSGKPLDQPLTFGDLWTAPRY
HHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PGEPGSERAVTLKMITTGISHQEPRSLPFESALFWFRRRDFDMLFPKAVVDWMVEKARDP
CCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
VTVAGENYYLLPHDADMPVLVATRMSLSFPLLISAVPLYEPARPESPPATEGEARAGPDD
EEEECCEEEEECCCCCCCEEEEHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
VEEKTVLDSTEALTTGGRKRRAGPAAFRICWFSDGGISSNFPIHLFDRALPRWPTFAINL
HHHHHHHCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCEEEEE
VYPTTSDTRPQPAVFLPESNRQGWQRHYQAIARNSAVHELCAFVFGIVATMQNWRDLLQS
EECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
RAPGHRERIVHVALSPEEGGLNLAMTKQVLDAVSKKGTAAGEIFARFSFENHYWIRWRNL
CCCCCHHEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHEEEECCCCEEEEHHHH
ASALQRYTIDIAASDAYQPKIPDYEVAYALARDATATPPSYRFANKAERHEAARLFEQLI
HHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHH
SEGKIWSEEGPDLTKTAPRPLPQLQIAPTY
HCCCEECCCCCCCCCCCCCCCCCCEECCCC
>Mature Secondary Structure 
ARTPAKYCDLVMKGGITSGIVYPNAVLALARDYRFKNIGGTSAGAIAAAACSAAAVGDR
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
CKRLKVPVAQPEEFIGFEGLARASANLSSPGFIRSLLQPAAGAGQAFRLLVILAGSAGFL
HHHCCCCCCCCHHHHCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHEEEEEEEECCCHHH
RKTLALLGSVLRIAPVEMLLLFASLASLAYAVGGPTGILSAALPAVICAYVGGAVFAVLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IARLMRRNLMGLCTGKAFHDRSRGRNAALTDWLHETLQALSGKPLDQPLTFGDLWTAPRY
HHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PGEPGSERAVTLKMITTGISHQEPRSLPFESALFWFRRRDFDMLFPKAVVDWMVEKARDP
CCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
VTVAGENYYLLPHDADMPVLVATRMSLSFPLLISAVPLYEPARPESPPATEGEARAGPDD
EEEECCEEEEECCCCCCCEEEEHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
VEEKTVLDSTEALTTGGRKRRAGPAAFRICWFSDGGISSNFPIHLFDRALPRWPTFAINL
HHHHHHHCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCEEEEE
VYPTTSDTRPQPAVFLPESNRQGWQRHYQAIARNSAVHELCAFVFGIVATMQNWRDLLQS
EECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
RAPGHRERIVHVALSPEEGGLNLAMTKQVLDAVSKKGTAAGEIFARFSFENHYWIRWRNL
CCCCCHHEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHEEEECCCCEEEEHHHH
ASALQRYTIDIAASDAYQPKIPDYEVAYALARDATATPPSYRFANKAERHEAARLFEQLI
HHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHH
SEGKIWSEEGPDLTKTAPRPLPQLQIAPTY
HCCCEECCCCCCCCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481430; 2113906 [H]