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The map label for this gene is abrB [H]

Identifier: 150397197

GI number: 150397197

Start: 2048687

End: 2049775

Strand: Direct

Name: abrB [H]

Synonym: Smed_1995

Alternate gene names: 150397197

Gene position: 2048687-2049775 (Clockwise)

Preceding gene: 150397195

Following gene: 150397198

Centisome position: 54.17

GC content: 63.36

Gene sequence:

>1089_bases
TTGAAGCCGGAACAGCCCTCAACCCCGACGCTGCCCAGGAACGGCGGACTGGGACGCCTGTCCCCCCTTTGGCAATGGGG
CCTGCTTGCCCTGCTCTCCGCCGTCTTCGCCGGGATACTCGAAATGATCGGTATTCCCGCCGGCCTGTTGATGGGGCCGA
TGATCGCGGGTGCGGTCATCGGCATGAATGGCGGCACGATACGATTGCCGCGACAGCTCTTCTTCTGCGTCCAGGTGATA
CTGGCCATGATGATCGCAGCCTCCATGAGCCCCGATCTTCTCGCGACCTTTTCCGGCCATTGGCCCCTCTTCCTTGGAAT
CGTTCTCTCAGTGATCGGCGTCAGCACACTCTGCGGCTGGACGATCACGCGCATGGGCATTCTGCCGGGCACGACCGCGA
TCTGGGGCTCGTCGGCGGGCGCGGCCTCGACCATGCTCCTGATGGCCGATGCCTATGGTGCGGATGCCCGGCTCGTCGCT
TTCATGCAATATCTGCGCGTCGTCTTCGTCGCCGGAACTGCCACGATCGTTTCCCATCTTTGGGTGAGCGGTGCCGAGGC
GCCGACGGCAGTCCGCTGGTTTGCCCCCATAGCGGGCGTTCCCTTCTTCATGACCCTCGCCATCGGCATCATCGGCGGCT
TTCTCGGCAAAATGCTGCGCGTCCCCGCCGGCGCCTTTCTCGTGCCTTTCGCAATCGGTTCGGCCCTCAACATCACTGGA
ACGCTGACGATCGAACTGCCGCAATGGCTTCTGGCGCTCTCTTTCGCAATGCTCGGCTGGAATATCGGCCTTGGCTTTAC
GCGGTCAATTCTTGCGCACGCCCGTCGCGCCCTGCTGCCGACGATCGTCTCCATTCTCGTGCTTATATCCTTTTCCGGTC
TTCTCGCGCTGTTGCTCATCGAGGCCGCCGGCATCGATCCGCTGACCGCCTATCTCGCGACCAGCCCCGGCGGGCTCGAT
TCCATTGCCGTGATCGCCGCATCGAGCAATGTCGACCTTCCTTTCGTGATGGCCTTGCAGACGGCCCGCCTGCTCATCAT
CACGCTGATCGGCCCCGCCCTCGCCCGCTTCGTCGCCGACCGGGCGTGA

Upstream 100 bases:

>100_bases
TACCTCGCCTTGAACCGGGGCGGCGGATGCTGCTACCAACGCCGCGCTGCATACAGTGTGCGCGATCGTCGACGCAGCCG
ATCCGCCCCGGAGAATATTC

Downstream 100 bases:

>100_bases
AGTCCGCCGCAATGCCCGGCGTCGGCGCGCCAGTAGATAGCCTTGTGCCCGCAAGCCCTCATCGTCGTTTTCGTCCTCGC
GGGGGAATAAATCCGCAACC

Product: putative ammonia monooxygenase

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKPEQPSTPTLPRNGGLGRLSPLWQWGLLALLSAVFAGILEMIGIPAGLLMGPMIAGAVIGMNGGTIRLPRQLFFCVQVI
LAMMIAASMSPDLLATFSGHWPLFLGIVLSVIGVSTLCGWTITRMGILPGTTAIWGSSAGAASTMLLMADAYGADARLVA
FMQYLRVVFVAGTATIVSHLWVSGAEAPTAVRWFAPIAGVPFFMTLAIGIIGGFLGKMLRVPAGAFLVPFAIGSALNITG
TLTIELPQWLLALSFAMLGWNIGLGFTRSILAHARRALLPTIVSILVLISFSGLLALLLIEAAGIDPLTAYLATSPGGLD
SIAVIAASSNVDLPFVMALQTARLLIITLIGPALARFVADRA

Sequences:

>Translated_362_residues
MKPEQPSTPTLPRNGGLGRLSPLWQWGLLALLSAVFAGILEMIGIPAGLLMGPMIAGAVIGMNGGTIRLPRQLFFCVQVI
LAMMIAASMSPDLLATFSGHWPLFLGIVLSVIGVSTLCGWTITRMGILPGTTAIWGSSAGAASTMLLMADAYGADARLVA
FMQYLRVVFVAGTATIVSHLWVSGAEAPTAVRWFAPIAGVPFFMTLAIGIIGGFLGKMLRVPAGAFLVPFAIGSALNITG
TLTIELPQWLLALSFAMLGWNIGLGFTRSILAHARRALLPTIVSILVLISFSGLLALLLIEAAGIDPLTAYLATSPGGLD
SIAVIAASSNVDLPFVMALQTARLLIITLIGPALARFVADRA
>Mature_362_residues
MKPEQPSTPTLPRNGGLGRLSPLWQWGLLALLSAVFAGILEMIGIPAGLLMGPMIAGAVIGMNGGTIRLPRQLFFCVQVI
LAMMIAASMSPDLLATFSGHWPLFLGIVLSVIGVSTLCGWTITRMGILPGTTAIWGSSAGAASTMLLMADAYGADARLVA
FMQYLRVVFVAGTATIVSHLWVSGAEAPTAVRWFAPIAGVPFFMTLAIGIIGGFLGKMLRVPAGAFLVPFAIGSALNITG
TLTIELPQWLLALSFAMLGWNIGLGFTRSILAHARRALLPTIVSILVLISFSGLLALLLIEAAGIDPLTAYLATSPGGLD
SIAVIAASSNVDLPFVMALQTARLLIITLIGPALARFVADRA

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=343, Percent_Identity=45.1895043731778, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 37776; Mature: 37776

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPEQPSTPTLPRNGGLGRLSPLWQWGLLALLSAVFAGILEMIGIPAGLLMGPMIAGAVI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHE
GMNGGTIRLPRQLFFCVQVILAMMIAASMSPDLLATFSGHWPLFLGIVLSVIGVSTLCGW
ECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
TITRMGILPGTTAIWGSSAGAASTMLLMADAYGADARLVAFMQYLRVVFVAGTATIVSHL
HHHHHCCCCCCCHHCCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WVSGAEAPTAVRWFAPIAGVPFFMTLAIGIIGGFLGKMLRVPAGAFLVPFAIGSALNITG
HHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEE
TLTIELPQWLLALSFAMLGWNIGLGFTRSILAHARRALLPTIVSILVLISFSGLLALLLI
EEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAGIDPLTAYLATSPGGLDSIAVIAASSNVDLPFVMALQTARLLIITLIGPALARFVAD
HHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
RA
CC
>Mature Secondary Structure
MKPEQPSTPTLPRNGGLGRLSPLWQWGLLALLSAVFAGILEMIGIPAGLLMGPMIAGAVI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHE
GMNGGTIRLPRQLFFCVQVILAMMIAASMSPDLLATFSGHWPLFLGIVLSVIGVSTLCGW
ECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
TITRMGILPGTTAIWGSSAGAASTMLLMADAYGADARLVAFMQYLRVVFVAGTATIVSHL
HHHHHCCCCCCCHHCCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WVSGAEAPTAVRWFAPIAGVPFFMTLAIGIIGGFLGKMLRVPAGAFLVPFAIGSALNITG
HHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEE
TLTIELPQWLLALSFAMLGWNIGLGFTRSILAHARRALLPTIVSILVLISFSGLLALLLI
EEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAGIDPLTAYLATSPGGLDSIAVIAASSNVDLPFVMALQTARLLIITLIGPALARFVAD
HHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
RA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]