Click here to switch to the map view.

The map label for this gene is 150397186

Identifier: 150397186

GI number: 150397186

Start: 2035869

End: 2036975

Strand: Direct

Name: 150397186

Synonym: Smed_1984

Alternate gene names: NA

Gene position: 2035869-2036975 (Clockwise)

Preceding gene: 150397185

Following gene: 150397187

Centisome position: 53.83

GC content: 62.51

Gene sequence:

>1107_bases
ATGACGCCTGCCGAAAGGCCATGCGATGAGACGATCCGGCGAGCGCTCGCCCGGGTTCTCGACAGCAAGGGCTTTCAGCG
CTCCGAACGTCTGCGCACGTTTCTCTCCTATGTGGTGGAAAAGGAAATCATCGGTGAAGGCGCTCAGCTGAAGGGCTACT
CGATCGCCATTGATGTTTTCGGACGCGGCCAGACCTTCAATGCCGACAGCGATCCTCTTGTGCGCGTCCATGCCGGCAAG
CTGCGCAAGCTGCTTAAGGCATTCTACGAAACGGATGGCGCCGGCGAAGAATGGCAGATCGCCATTCCCAAGGGGACCTA
TGTGCCGGAGTACCGCCGGTGTTCAAACGGCGTCGAGGCATTGCCGGGCCCGGATGCCGCGGGCGCCCGCCGTCGCCAGC
CCGGACGCGGGCCACCCTGGCAGCCCGCCCCCTTTTCGTCCCCCTGGGCCGTGCTTACCGTGCTGCCGCTTCTCCTTTTC
GCCCCTCTGCCGGCCTCGGAAATGTCGCTCGACATCGATGCCGAGGCTAAACTCGTCAATGGTCCGATGGCCGCCGTCAG
GGGGCTTCCCTCCGTCAGCATCAGCGTGACAGGATCGCAGCACAGGAGCACCCGGCGTTTCTCCTCGCAACTGCGTGATG
CGGCGCTTCGGCATGGCACACTTGCCCAGGCGCACGTGTCTGATGGGAACCGCACACCGGCATCCGGCAATCAGGCGCTT
GCGTTTTCCATCGCGCTCGCCTGGCACGATGCGCCTGCGGCGGGCATCCGGGTCACCCTGTCCCACGATGGGGAAGGCAT
CCCTTTGCGCCAGGACTTCATCTCCGCCGACCGCCTCGATAGCGAGGCCGATGTTCTCTACGAAAGCACTTCGCTTGCAG
CGAAACTCTTCTCGCTGGACGGCGAGATCTATGCGCATGCCGCACTGGAAGGCTTGCAAAGTACCATGATGCAATGCATG
TCGGCGACTGCCAAGTACCGGAAGCTGCTGACGCGCGACAGTTTCCAGCAGGCCTGGAACTGCCAGCAGAAGCTCAAGCC
CCTCAAAGGCGACGAGCCCTTCTTCATCCTTTCCGTAAGCAGTCCGCACAAGATCAATGGCCATTGA

Upstream 100 bases:

>100_bases
CAACCACCATCTTTGGGCCTAAGTTCCGAATCAGATTAAAGTTGCTTATGTGCTAAAACACAATTCCGGCATTGAGCCGC
ACACTTTCTTGGAGCCACCG

Downstream 100 bases:

>100_bases
ATTTTACGCCTGTGGCCATTCACGCAGGTGGAGACGTGCCGGCGCGGAGTTGCGCACCGGATTGTAATCACGGCCGGCAT
CATCTGTCGCCATTGGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Adenylate Cyclase; PAS/PAC Sensor Protein; Tetratricopeptide Repeat Protein; Adenylate Cyclase

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MTPAERPCDETIRRALARVLDSKGFQRSERLRTFLSYVVEKEIIGEGAQLKGYSIAIDVFGRGQTFNADSDPLVRVHAGK
LRKLLKAFYETDGAGEEWQIAIPKGTYVPEYRRCSNGVEALPGPDAAGARRRQPGRGPPWQPAPFSSPWAVLTVLPLLLF
APLPASEMSLDIDAEAKLVNGPMAAVRGLPSVSISVTGSQHRSTRRFSSQLRDAALRHGTLAQAHVSDGNRTPASGNQAL
AFSIALAWHDAPAAGIRVTLSHDGEGIPLRQDFISADRLDSEADVLYESTSLAAKLFSLDGEIYAHAALEGLQSTMMQCM
SATAKYRKLLTRDSFQQAWNCQQKLKPLKGDEPFFILSVSSPHKINGH

Sequences:

>Translated_368_residues
MTPAERPCDETIRRALARVLDSKGFQRSERLRTFLSYVVEKEIIGEGAQLKGYSIAIDVFGRGQTFNADSDPLVRVHAGK
LRKLLKAFYETDGAGEEWQIAIPKGTYVPEYRRCSNGVEALPGPDAAGARRRQPGRGPPWQPAPFSSPWAVLTVLPLLLF
APLPASEMSLDIDAEAKLVNGPMAAVRGLPSVSISVTGSQHRSTRRFSSQLRDAALRHGTLAQAHVSDGNRTPASGNQAL
AFSIALAWHDAPAAGIRVTLSHDGEGIPLRQDFISADRLDSEADVLYESTSLAAKLFSLDGEIYAHAALEGLQSTMMQCM
SATAKYRKLLTRDSFQQAWNCQQKLKPLKGDEPFFILSVSSPHKINGH
>Mature_367_residues
TPAERPCDETIRRALARVLDSKGFQRSERLRTFLSYVVEKEIIGEGAQLKGYSIAIDVFGRGQTFNADSDPLVRVHAGKL
RKLLKAFYETDGAGEEWQIAIPKGTYVPEYRRCSNGVEALPGPDAAGARRRQPGRGPPWQPAPFSSPWAVLTVLPLLLFA
PLPASEMSLDIDAEAKLVNGPMAAVRGLPSVSISVTGSQHRSTRRFSSQLRDAALRHGTLAQAHVSDGNRTPASGNQALA
FSIALAWHDAPAAGIRVTLSHDGEGIPLRQDFISADRLDSEADVLYESTSLAAKLFSLDGEIYAHAALEGLQSTMMQCMS
ATAKYRKLLTRDSFQQAWNCQQKLKPLKGDEPFFILSVSSPHKINGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40132; Mature: 40001

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAERPCDETIRRALARVLDSKGFQRSERLRTFLSYVVEKEIIGEGAQLKGYSIAIDVF
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEEEE
GRGQTFNADSDPLVRVHAGKLRKLLKAFYETDGAGEEWQIAIPKGTYVPEYRRCSNGVEA
ECCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCCC
LPGPDAAGARRRQPGRGPPWQPAPFSSPWAVLTVLPLLLFAPLPASEMSLDIDAEAKLVN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCEECCCCCCEEEC
GPMAAVRGLPSVSISVTGSQHRSTRRFSSQLRDAALRHGTLAQAHVSDGNRTPASGNQAL
CHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEE
AFSIALAWHDAPAAGIRVTLSHDGEGIPLRQDFISADRLDSEADVLYESTSLAAKLFSLD
EEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
GEIYAHAALEGLQSTMMQCMSATAKYRKLLTRDSFQQAWNCQQKLKPLKGDEPFFILSVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEECC
SPHKINGH
CCCCCCCC
>Mature Secondary Structure 
TPAERPCDETIRRALARVLDSKGFQRSERLRTFLSYVVEKEIIGEGAQLKGYSIAIDVF
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEEEE
GRGQTFNADSDPLVRVHAGKLRKLLKAFYETDGAGEEWQIAIPKGTYVPEYRRCSNGVEA
ECCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCCC
LPGPDAAGARRRQPGRGPPWQPAPFSSPWAVLTVLPLLLFAPLPASEMSLDIDAEAKLVN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCEECCCCCCEEEC
GPMAAVRGLPSVSISVTGSQHRSTRRFSSQLRDAALRHGTLAQAHVSDGNRTPASGNQAL
CHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEE
AFSIALAWHDAPAAGIRVTLSHDGEGIPLRQDFISADRLDSEADVLYESTSLAAKLFSLD
EEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
GEIYAHAALEGLQSTMMQCMSATAKYRKLLTRDSFQQAWNCQQKLKPLKGDEPFFILSVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEECC
SPHKINGH
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA