Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397181

Identifier: 150397181

GI number: 150397181

Start: 2029480

End: 2030823

Strand: Direct

Name: 150397181

Synonym: Smed_1979

Alternate gene names: NA

Gene position: 2029480-2030823 (Clockwise)

Preceding gene: 150397177

Following gene: 150397185

Centisome position: 53.66

GC content: 59.82

Gene sequence:

>1344_bases
ATGAAAAAGCGGCATTTCGGGCTTGCGGTGTGCGTGCTTCCGGCCCTTTATCTGTTGCTCAGTCCCGTCTACGCGTTGCT
CAATTACGATCTGTTCGCTGCTGAAGCCCCGCATTTCGTTCGTTATGTGGTGATCCCCGGCCTGCTCGCTGCGTGCTTCC
TCGTTCTCGGCCTGTTTGCGAGGCCAAACCTTTCCATTCTTGCGGGCGTCTGCGGATCGAGCATTTTGCTCGGCCTCTTC
CTGTTCGAGGCGATGCACACGGTAACGGCCGTATCCGTGCGTTTGGGAATGTTCGGACAACTCAGCGAAGCGCAGGCAGA
AACGCTCAGACGCAACGATAATATGGTTCCCGGCTTCACGCTTCGATACCTGAACCGCGTCTCTGGCACCGACGAACTGC
CCGAGGCGCTGCTTTCCGGATTTCCGGCTGCGGAAGTGGTGCTTTGCACGTCCGGCGATGGTGTGGTCAGCTACACCGCC
GACCGATACGGCTTCAACAATCCCGATGACCTCTATGACGATCCGCTGGATTTGATGCTCCTTGGAGATTCTTTCGTGGA
AGGCTTTTGCCTGCCGCCGGGAGATGACCTAGCGTCCCAATTGCGTGCGGGCGGTATCCGCACCGCAAGCATAGGCATAC
GCGGAAACGGCCCTCTGACCGAACTCGCTGCTCTCGGCCGCTTTGGCGAGATCTTGCGCCCGCGGCGCGTGATGATGGTC
TTCTTCGAAGGCAACGACTGGGAAAATCTGGAACGCGAACTTGCAGTTCCGTGGCTCCGCACGGCGCTGTCGCCGGATGC
GGACTTCGGTTTGCAATCTGCCGTGCAGAATGCGATGCGGCAGGCACGAAGCATCTTGACCGAGCATAGGAACGCTGCTG
TGACAAGCGTGGACCTCCTCACCAGAACGGCCTTGTTTCGCAATTTCGTCGCACTGCAGCAGACCCTCACGCGCCTCGGG
CTGGTTTATCCGAAAATTACTCCAAGCAATCCGGAGTTCAGACGAATCTTGCACCGGGCAAAGCAACTCACCGAGAGCTG
GGGCGGCTCTTTTACACTGGTCTACGTGCCGAGGATCGACCGTTTCATGGGACCGTTCTCGTCTGATCGGCCCTTCGATC
CGCTGAGGATAAAAGTCCTGGGCGCCGCCGCGGCGGAAGGGATCGAGGTCATTGATCTCAATCCGGCGATCCGCGCGCAG
GCCGACCCACTGCTGATGTATGCGCCCGACGCCCATTTCAGTCGCACCGGAGCCGAGTTCGCGGCGAGCGAGATTCTTCG
TCGCGTGGGCGCGGCAACACCGGGCTCCCGGCAGCTCCCGGGGCAAGTCGTGGAGAACGAATAG

Upstream 100 bases:

>100_bases
ACCCAAGCCGTCACTGCAGAGGAGCAGGATAAGGCGCTCTTAAAGAGACGTTTTCCCTAGTCTTCGCACTATAAACGGTT
TGCGAACGAGGATACGCATT

Downstream 100 bases:

>100_bases
AGGCTTTTCCGTCCGGATGCCGGCCGAGCGCCGGCCCGGCAACACTGCCGCCGTCAGCCGTGTCCTAGCTGCAGTCGTTG
AGCAAGATTGGCGAGCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MKKRHFGLAVCVLPALYLLLSPVYALLNYDLFAAEAPHFVRYVVIPGLLAACFLVLGLFARPNLSILAGVCGSSILLGLF
LFEAMHTVTAVSVRLGMFGQLSEAQAETLRRNDNMVPGFTLRYLNRVSGTDELPEALLSGFPAAEVVLCTSGDGVVSYTA
DRYGFNNPDDLYDDPLDLMLLGDSFVEGFCLPPGDDLASQLRAGGIRTASIGIRGNGPLTELAALGRFGEILRPRRVMMV
FFEGNDWENLERELAVPWLRTALSPDADFGLQSAVQNAMRQARSILTEHRNAAVTSVDLLTRTALFRNFVALQQTLTRLG
LVYPKITPSNPEFRRILHRAKQLTESWGGSFTLVYVPRIDRFMGPFSSDRPFDPLRIKVLGAAAAEGIEVIDLNPAIRAQ
ADPLLMYAPDAHFSRTGAEFAASEILRRVGAATPGSRQLPGQVVENE

Sequences:

>Translated_447_residues
MKKRHFGLAVCVLPALYLLLSPVYALLNYDLFAAEAPHFVRYVVIPGLLAACFLVLGLFARPNLSILAGVCGSSILLGLF
LFEAMHTVTAVSVRLGMFGQLSEAQAETLRRNDNMVPGFTLRYLNRVSGTDELPEALLSGFPAAEVVLCTSGDGVVSYTA
DRYGFNNPDDLYDDPLDLMLLGDSFVEGFCLPPGDDLASQLRAGGIRTASIGIRGNGPLTELAALGRFGEILRPRRVMMV
FFEGNDWENLERELAVPWLRTALSPDADFGLQSAVQNAMRQARSILTEHRNAAVTSVDLLTRTALFRNFVALQQTLTRLG
LVYPKITPSNPEFRRILHRAKQLTESWGGSFTLVYVPRIDRFMGPFSSDRPFDPLRIKVLGAAAAEGIEVIDLNPAIRAQ
ADPLLMYAPDAHFSRTGAEFAASEILRRVGAATPGSRQLPGQVVENE
>Mature_447_residues
MKKRHFGLAVCVLPALYLLLSPVYALLNYDLFAAEAPHFVRYVVIPGLLAACFLVLGLFARPNLSILAGVCGSSILLGLF
LFEAMHTVTAVSVRLGMFGQLSEAQAETLRRNDNMVPGFTLRYLNRVSGTDELPEALLSGFPAAEVVLCTSGDGVVSYTA
DRYGFNNPDDLYDDPLDLMLLGDSFVEGFCLPPGDDLASQLRAGGIRTASIGIRGNGPLTELAALGRFGEILRPRRVMMV
FFEGNDWENLERELAVPWLRTALSPDADFGLQSAVQNAMRQARSILTEHRNAAVTSVDLLTRTALFRNFVALQQTLTRLG
LVYPKITPSNPEFRRILHRAKQLTESWGGSFTLVYVPRIDRFMGPFSSDRPFDPLRIKVLGAAAAEGIEVIDLNPAIRAQ
ADPLLMYAPDAHFSRTGAEFAASEILRRVGAATPGSRQLPGQVVENE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48902; Mature: 48902

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRHFGLAVCVLPALYLLLSPVYALLNYDLFAAEAPHFVRYVVIPGLLAACFLVLGLFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
RPNLSILAGVCGSSILLGLFLFEAMHTVTAVSVRLGMFGQLSEAQAETLRRNDNMVPGFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHH
LRYLNRVSGTDELPEALLSGFPAAEVVLCTSGDGVVSYTADRYGFNNPDDLYDDPLDLML
HHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHHCCCCCCCCCCCCCHHEEE
LGDSFVEGFCLPPGDDLASQLRAGGIRTASIGIRGNGPLTELAALGRFGEILRPRRVMMV
ECCHHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
FFEGNDWENLERELAVPWLRTALSPDADFGLQSAVQNAMRQARSILTEHRNAAVTSVDLL
EECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
TRTALFRNFVALQQTLTRLGLVYPKITPSNPEFRRILHRAKQLTESWGGSFTLVYVPRID
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
RFMGPFSSDRPFDPLRIKVLGAAAAEGIEVIDLNPAIRAQADPLLMYAPDAHFSRTGAEF
HHHCCCCCCCCCCCEEEEEEEHHHHCCEEEEECCCCHHCCCCCEEEECCCCCCHHCCHHH
AASEILRRVGAATPGSRQLPGQVVENE
HHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKRHFGLAVCVLPALYLLLSPVYALLNYDLFAAEAPHFVRYVVIPGLLAACFLVLGLFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
RPNLSILAGVCGSSILLGLFLFEAMHTVTAVSVRLGMFGQLSEAQAETLRRNDNMVPGFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHH
LRYLNRVSGTDELPEALLSGFPAAEVVLCTSGDGVVSYTADRYGFNNPDDLYDDPLDLML
HHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHHCCCCCCCCCCCCCHHEEE
LGDSFVEGFCLPPGDDLASQLRAGGIRTASIGIRGNGPLTELAALGRFGEILRPRRVMMV
ECCHHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
FFEGNDWENLERELAVPWLRTALSPDADFGLQSAVQNAMRQARSILTEHRNAAVTSVDLL
EECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
TRTALFRNFVALQQTLTRLGLVYPKITPSNPEFRRILHRAKQLTESWGGSFTLVYVPRID
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
RFMGPFSSDRPFDPLRIKVLGAAAAEGIEVIDLNPAIRAQADPLLMYAPDAHFSRTGAEF
HHHCCCCCCCCCCCEEEEEEEHHHHCCEEEEECCCCHHCCCCCEEEECCCCCCHHCCHHH
AASEILRRVGAATPGSRQLPGQVVENE
HHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA