| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is ilvC [H]
Identifier: 150397164
GI number: 150397164
Start: 2013432
End: 2014451
Strand: Reverse
Name: ilvC [H]
Synonym: Smed_1962
Alternate gene names: 150397164
Gene position: 2014451-2013432 (Counterclockwise)
Preceding gene: 150397165
Following gene: 150397162
Centisome position: 53.27
GC content: 60.2
Gene sequence:
>1020_bases ATGCGCGTCTATTACGATCGTGATGCCGATCTCAACCTCATCAAGTCGAAGAAGGTCGCCATCATCGGCTACGGCAGCCA AGGCCGCGCCCATGCGCTGAACCTCAAGGATTCCGGAGCGCAGAACGTCGCCATCGCGCTGAAGTCGGGTTCAGCTACGG CAAAGAAGGCCGAAGCGGATGGTTTCAAGGTCATGACGGTTGCCGAAGCTGCGGCCTGGGCCGACCTGATGATGATGGCA ACGCCGGACGAACTGCAGGCCGATATCTACAAGGCCGAAATCGCCGGCAATATCCGCGACGGCGCAGCGATCGCCTTTGC GCACGGCCTGAACGTGCATTTCGGCCTGATCGAGCCGAAGGCTTCGGTCGATGTCGTGATGATCGCCCCGAAAGGCCCGG GCCATACGGTTCGCGGCGAATACCAGAAGGGCGGCGGCGTTCCCTGCCTTGTTGCCGTTCATCAGGATGCTTCCGGCAAT GCACTCGACCTCGCGCTCTCCTATGCCTGCGGCGTCGGCGGCGGCCGCTCGGGCATCATCGAAACCAACTTCAAGGAAGA ATGCGAAACCGACCTCTTCGGTGAGCAGGTCGTTCTCTGCGGCGGTCTGGTCGAGCTTATCCGGGCTGGTTTCGAAACGC TGGTCGAGGCCGGCTATGCGCCGGAGATGGCCTATTTCGAGTGCCTGCACGAAGTCAAGCTGATCGTCGACCTGATCTAT GAAGGCGGCATTGCCAACATGAACTACTCGATCTCCAACACGGCCGAGTGGGGCGAATACGTCACCGGTCCGCGCATCAT CACCGAAGAAACCAAGGCCGAGATGAAGCGCGTGCTGAAGGACATCCAGACCGGCAAGTTCACCTCGGAATGGATGCAGG AGTACCGCTCCGGTGCTGCTCGCTTCAAGGGCATTCGTCGCGTCAACGACGCCCATCAGATCGAGGAAGTCGGCGCCAAG CTGCGCGGAATGATGCCCTGGATCGGCAAGAACAAGCTGGTCGACAAGGCGAAGAACTAA
Upstream 100 bases:
>100_bases CGGTCGACGCCTTTCTCACGCTTTACGGCGCGAAAGAGTAGGGCGGCGGTATTTTTCGGCTGCCAAAGCGAAACAGACAA GCAAAGGGAAGGAAAATTCG
Downstream 100 bases:
>100_bases GATCTGCCTTCAATGAAAAGAAGGAAAGCCGGAGCGCGCTCCGGCTTTCCGTTCAGGAATTGCAGCGCTTACATCGGATC ATTGCCTTTCATGGCATTCG
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MRVYYDRDADLNLIKSKKVAIIGYGSQGRAHALNLKDSGAQNVAIALKSGSATAKKAEADGFKVMTVAEAAAWADLMMMA TPDELQADIYKAEIAGNIRDGAAIAFAHGLNVHFGLIEPKASVDVVMIAPKGPGHTVRGEYQKGGGVPCLVAVHQDASGN ALDLALSYACGVGGGRSGIIETNFKEECETDLFGEQVVLCGGLVELIRAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY EGGIANMNYSISNTAEWGEYVTGPRIITEETKAEMKRVLKDIQTGKFTSEWMQEYRSGAARFKGIRRVNDAHQIEEVGAK LRGMMPWIGKNKLVDKAKN
Sequences:
>Translated_339_residues MRVYYDRDADLNLIKSKKVAIIGYGSQGRAHALNLKDSGAQNVAIALKSGSATAKKAEADGFKVMTVAEAAAWADLMMMA TPDELQADIYKAEIAGNIRDGAAIAFAHGLNVHFGLIEPKASVDVVMIAPKGPGHTVRGEYQKGGGVPCLVAVHQDASGN ALDLALSYACGVGGGRSGIIETNFKEECETDLFGEQVVLCGGLVELIRAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY EGGIANMNYSISNTAEWGEYVTGPRIITEETKAEMKRVLKDIQTGKFTSEWMQEYRSGAARFKGIRRVNDAHQIEEVGAK LRGMMPWIGKNKLVDKAKN >Mature_339_residues MRVYYDRDADLNLIKSKKVAIIGYGSQGRAHALNLKDSGAQNVAIALKSGSATAKKAEADGFKVMTVAEAAAWADLMMMA TPDELQADIYKAEIAGNIRDGAAIAFAHGLNVHFGLIEPKASVDVVMIAPKGPGHTVRGEYQKGGGVPCLVAVHQDASGN ALDLALSYACGVGGGRSGIIETNFKEECETDLFGEQVVLCGGLVELIRAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY EGGIANMNYSISNTAEWGEYVTGPRIITEETKAEMKRVLKDIQTGKFTSEWMQEYRSGAARFKGIRRVNDAHQIEEVGAK LRGMMPWIGKNKLVDKAKN
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=291, Percent_Identity=35.7388316151203, Blast_Score=158, Evalue=6e-40, Organism=Saccharomyces cerevisiae, GI6323387, Length=335, Percent_Identity=29.5522388059701, Blast_Score=115, Evalue=7e-27,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 36625; Mature: 36625
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVYYDRDADLNLIKSKKVAIIGYGSQGRAHALNLKDSGAQNVAIALKSGSATAKKAEAD CEEEECCCCCCEEECCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCC GFKVMTVAEAAAWADLMMMATPDELQADIYKAEIAGNIRDGAAIAFAHGLNVHFGLIEPK CEEEEEHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECCC ASVDVVMIAPKGPGHTVRGEYQKGGGVPCLVAVHQDASGNALDLALSYACGVGGGRSGII CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHCCCCCCCCCE ETNFKEECETDLFGEQVVLCGGLVELIRAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY ECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGGIANMNYSISNTAEWGEYVTGPRIITEETKAEMKRVLKDIQTGKFTSEWMQEYRSGAA CCCCCCCCEECCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RFKGIRRVNDAHQIEEVGAKLRGMMPWIGKNKLVDKAKN HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC >Mature Secondary Structure MRVYYDRDADLNLIKSKKVAIIGYGSQGRAHALNLKDSGAQNVAIALKSGSATAKKAEAD CEEEECCCCCCEEECCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCC GFKVMTVAEAAAWADLMMMATPDELQADIYKAEIAGNIRDGAAIAFAHGLNVHFGLIEPK CEEEEEHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECCC ASVDVVMIAPKGPGHTVRGEYQKGGGVPCLVAVHQDASGNALDLALSYACGVGGGRSGII CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHCCCCCCCCCE ETNFKEECETDLFGEQVVLCGGLVELIRAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY ECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGGIANMNYSISNTAEWGEYVTGPRIITEETKAEMKRVLKDIQTGKFTSEWMQEYRSGAA CCCCCCCCEECCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RFKGIRRVNDAHQIEEVGAKLRGMMPWIGKNKLVDKAKN HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA