| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is cya3 [H]
Identifier: 150397162
GI number: 150397162
Start: 2011949
End: 2012902
Strand: Reverse
Name: cya3 [H]
Synonym: Smed_1960
Alternate gene names: 150397162
Gene position: 2012902-2011949 (Counterclockwise)
Preceding gene: 150397164
Following gene: 150397161
Centisome position: 53.22
GC content: 64.57
Gene sequence:
>954_bases ATGTCAAGAACACGCCGTAAGCTGACGACCATCTTCTGTGCCGACGTGCAGGATTATTCGCGCCTGATGGGGAAGGACGA AGAGGGGACGCTGGCGGCCCTGAAGCGCAGCCGCGATGCCATGGCGCGCCTGATCGAGGCGCATGAGGGTCGGGTTGTCA ACACCTGGGGCGATGGCCTGATCGCGGAATTTCCGAGCGTCGTGGAAGCGGTGAGGGCGGCAATAGACGTCCAGAACGAA TTGGCCGGGTTGAATGCCGGGCGCCCGAGCGAAGCGCGAATGGACTATCGCATCGGCATCAATCTCGGTGATGTGATCGC TGACGGCGATGACCTTTACGGCGACGGCGTCAATATCGCGGCGCGCCTGCAAGGCTCCGCGCCGGCCGGTGGCATAGTGA TATCCAGCACCGTCTATGACCAGGTCCGCAACAAGCTGGCCGTCGGCTTCGAATTTCTCGGCGCGCTGACGGTCAAGAAT ATCGATGGCGGCGTTCCGAGTTACGCGGTTCAGATCGGAGCGGCGGAAGGTCCGGGATTGCCGGAAGCCAGCGGCGGCTG GGGAAGACAGGGCGCCCCTTCCGATCGCGAGAACCTGGCCGCAGACACAGGAGCAGAAGGGGTGCCAGCCGGGGGCTTAT CAAGGACGGACCGCCGCATTTTCGGTGTCCTCGGCGTGGCGGCGGCTGGGGTCGTCGCCATAAATTTCGCTTCGTGGGAG GGGGAGTTCTGGGCGAGATGGCCCTTGTTTGCTTTCGCCTTGATCGCCGTGCTTCGCCAGATAAGCGGGTTGACGCAATT CGACCGCGGGCTTGCCCTGCTCGGGGCCGTCGGATCTGCGGCCGTCGCGGTCAACCTCCTTTCCTGGGAGGGGCGATTCT GGGCGATCTGGCCCGTGCTCGGAATTGCGGTTGCGGCGGGGATCCGATGGGCGGTGCGCGGCTCCGCCCGGTGA
Upstream 100 bases:
>100_bases CGCCGCTGCTCCGGCCACCGGCATTGAGATTCACCACGGCCTCGCTATGCTGCCCGCAAGGCGCCGACCTGCCGTCGACT CCGAGCGAGGGCGAAATCCG
Downstream 100 bases:
>100_bases GGTCCGGCCGGCATTGGCAGGTGACCGATGCAGCCGCTGTAACCAGAAGTTGACGGGACTCGGCAAGCCGTGCATTCTGC CCGCGAAAGAAAGCCAGTTC
Product: putative adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSRTRRKLTTIFCADVQDYSRLMGKDEEGTLAALKRSRDAMARLIEAHEGRVVNTWGDGLIAEFPSVVEAVRAAIDVQNE LAGLNAGRPSEARMDYRIGINLGDVIADGDDLYGDGVNIAARLQGSAPAGGIVISSTVYDQVRNKLAVGFEFLGALTVKN IDGGVPSYAVQIGAAEGPGLPEASGGWGRQGAPSDRENLAADTGAEGVPAGGLSRTDRRIFGVLGVAAAGVVAINFASWE GEFWARWPLFAFALIAVLRQISGLTQFDRGLALLGAVGSAAVAVNLLSWEGRFWAIWPVLGIAVAAGIRWAVRGSAR
Sequences:
>Translated_317_residues MSRTRRKLTTIFCADVQDYSRLMGKDEEGTLAALKRSRDAMARLIEAHEGRVVNTWGDGLIAEFPSVVEAVRAAIDVQNE LAGLNAGRPSEARMDYRIGINLGDVIADGDDLYGDGVNIAARLQGSAPAGGIVISSTVYDQVRNKLAVGFEFLGALTVKN IDGGVPSYAVQIGAAEGPGLPEASGGWGRQGAPSDRENLAADTGAEGVPAGGLSRTDRRIFGVLGVAAAGVVAINFASWE GEFWARWPLFAFALIAVLRQISGLTQFDRGLALLGAVGSAAVAVNLLSWEGRFWAIWPVLGIAVAAGIRWAVRGSAR >Mature_316_residues SRTRRKLTTIFCADVQDYSRLMGKDEEGTLAALKRSRDAMARLIEAHEGRVVNTWGDGLIAEFPSVVEAVRAAIDVQNEL AGLNAGRPSEARMDYRIGINLGDVIADGDDLYGDGVNIAARLQGSAPAGGIVISSTVYDQVRNKLAVGFEFLGALTVKNI DGGVPSYAVQIGAAEGPGLPEASGGWGRQGAPSDRENLAADTGAEGVPAGGLSRTDRRIFGVLGVAAAGVVAINFASWEG EFWARWPLFAFALIAVLRQISGLTQFDRGLALLGAVGSAAVAVNLLSWEGRFWAIWPVLGIAVAAGIRWAVRGSAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 33335; Mature: 33204
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTRRKLTTIFCADVQDYSRLMGKDEEGTLAALKRSRDAMARLIEAHEGRVVNTWGDGL CCCHHHHHHHEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCH IAEFPSVVEAVRAAIDVQNELAGLNAGRPSEARMDYRIGINLGDVIADGDDLYGDGVNIA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHEEECCCCCCCCCCEEE ARLQGSAPAGGIVISSTVYDQVRNKLAVGFEFLGALTVKNIDGGVPSYAVQIGAAEGPGL EEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCC PEASGGWGRQGAPSDRENLAADTGAEGVPAGGLSRTDRRIFGVLGVAAAGVVAINFASWE CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCC GEFWARWPLFAFALIAVLRQISGLTQFDRGLALLGAVGSAAVAVNLLSWEGRFWAIWPVL CCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHEEEEEECCCCEEEHHHHH GIAVAAGIRWAVRGSAR HHHHHHCCCEEECCCCC >Mature Secondary Structure SRTRRKLTTIFCADVQDYSRLMGKDEEGTLAALKRSRDAMARLIEAHEGRVVNTWGDGL CCHHHHHHHEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCH IAEFPSVVEAVRAAIDVQNELAGLNAGRPSEARMDYRIGINLGDVIADGDDLYGDGVNIA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHEEECCCCCCCCCCEEE ARLQGSAPAGGIVISSTVYDQVRNKLAVGFEFLGALTVKNIDGGVPSYAVQIGAAEGPGL EEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCC PEASGGWGRQGAPSDRENLAADTGAEGVPAGGLSRTDRRIFGVLGVAAAGVVAINFASWE CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCC GEFWARWPLFAFALIAVLRQISGLTQFDRGLALLGAVGSAAVAVNLLSWEGRFWAIWPVL CCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHEEEEEECCCCEEEHHHHH GIAVAAGIRWAVRGSAR HHHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]