| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is proX [C]
Identifier: 150397161
GI number: 150397161
Start: 2010852
End: 2011796
Strand: Reverse
Name: proX [C]
Synonym: Smed_1959
Alternate gene names: 150397161
Gene position: 2011796-2010852 (Counterclockwise)
Preceding gene: 150397162
Following gene: 150397160
Centisome position: 53.2
GC content: 62.22
Gene sequence:
>945_bases ATGAGGAGAGGCGGAGAGTTCTTTTGCGCGGCGGCGCTGGCGGTAGCGATGACTGCGCCGGCAGCCGCGGCGGATCTGGT AATCGCGATGCCGCCGTGGCCGTCAGGTCAGGCGGCGGCGAACATCCTCAAATTCGGCATCGCCAAGAAATTCAGCCTCG ATGCGGAGGTGCGGGAACTCGGTACGCTCAACGCTTTCGTCGGCCTAGAGAAGGGCGAAATCGACATCCAGCCGGAGGTT TGGCGGCCAAATTTCGACGAGCTCGTCCGCAAGTTCGTGACCGAAAAGGGCGCCGTGACGCTGAGTACGCGTGCGGTACC TGCATGGCAGGGGATTTGCGCCACGCCGGAGGCGGCCGCGACGATCAAGACCGTTGCGGATCTCGGCGACCCGGCCAAGA CGAAATTCCTGGACACCGACGGTGACGGACGCGGAGAAATGTGGATCGGCGCCGCCGAATGGCTTTCGACCGGAATCGAA CGTGCGCGGGCGGCCGGCTATGGCTATGCGGCAAACCTGACGCTTGTCGAGGCCAAGGAAGATGTTGCAATGGCGGCGGT GGATGCGGCAATCGCGACGGCGCGGCCGATGGTCTTCTACTGCTACGCTCCGCATCATGTTTTCAAGCTGCACCAGATCT CCCGGCTTGAGGAGCCGCCCCATGATCCTTCCAAATGGAAAATCGCGCCGCCGAACGATCCGCTATGGGTCAGCAAGTCG AGCGCGTCCACGGCCTGGGACGCGGGCCAGTTCCAGATCGGCTATGCGACGGCTTTTGCAAAGAAACATCCCGAAGTCGC GCAGTTCCTTCAGAATGTGGACTTCTCCCCGGATGAAGTGACGGCGATGAGTTATGCGCTCCAAGTCGAGCGGCAGACGC CGGTGGACTACGCCAGGAAGTGGGTTGAAAGCCACGCGGAACGGATCGACGGATGGGCGAAATGA
Upstream 100 bases:
>100_bases ACGGGACTCGGCAAGCCGTGCATTCTGCCCGCGAAAGAAAGCCAGTTCAGCAAGCATTCGCATAAAGAAGACGTCCGGGT AAACCTTTTCGGGGGGTACT
Downstream 100 bases:
>100_bases CGATGAGCCAGGAGTTCCCGAAGATATCTGTCGGCCGCCGCAAATTTGGAAAGGCGCTGCTTCTCCTCGGTTTTTGCCTT ATTCCGCTTGCAGCGCTTGC
Product: glycine betaine ABC transporter substrate-binding protein
Products: ADP; phosphate; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MRRGGEFFCAAALAVAMTAPAAAADLVIAMPPWPSGQAAANILKFGIAKKFSLDAEVRELGTLNAFVGLEKGEIDIQPEV WRPNFDELVRKFVTEKGAVTLSTRAVPAWQGICATPEAAATIKTVADLGDPAKTKFLDTDGDGRGEMWIGAAEWLSTGIE RARAAGYGYAANLTLVEAKEDVAMAAVDAAIATARPMVFYCYAPHHVFKLHQISRLEEPPHDPSKWKIAPPNDPLWVSKS SASTAWDAGQFQIGYATAFAKKHPEVAQFLQNVDFSPDEVTAMSYALQVERQTPVDYARKWVESHAERIDGWAK
Sequences:
>Translated_314_residues MRRGGEFFCAAALAVAMTAPAAAADLVIAMPPWPSGQAAANILKFGIAKKFSLDAEVRELGTLNAFVGLEKGEIDIQPEV WRPNFDELVRKFVTEKGAVTLSTRAVPAWQGICATPEAAATIKTVADLGDPAKTKFLDTDGDGRGEMWIGAAEWLSTGIE RARAAGYGYAANLTLVEAKEDVAMAAVDAAIATARPMVFYCYAPHHVFKLHQISRLEEPPHDPSKWKIAPPNDPLWVSKS SASTAWDAGQFQIGYATAFAKKHPEVAQFLQNVDFSPDEVTAMSYALQVERQTPVDYARKWVESHAERIDGWAK >Mature_314_residues MRRGGEFFCAAALAVAMTAPAAAADLVIAMPPWPSGQAAANILKFGIAKKFSLDAEVRELGTLNAFVGLEKGEIDIQPEV WRPNFDELVRKFVTEKGAVTLSTRAVPAWQGICATPEAAATIKTVADLGDPAKTKFLDTDGDGRGEMWIGAAEWLSTGIE RARAAGYGYAANLTLVEAKEDVAMAAVDAAIATARPMVFYCYAPHHVFKLHQISRLEEPPHDPSKWKIAPPNDPLWVSKS SASTAWDAGQFQIGYATAFAKKHPEVAQFLQNVDFSPDEVTAMSYALQVERQTPVDYARKWVESHAERIDGWAK
Specific function: Member Of A Multicomponent Binding-Protein-Dependent Transport System (The Prou Transporter) Which Serves As The Glycine Betaine/L-Proline Transporter. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34135; Mature: 34135
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGGEFFCAAALAVAMTAPAAAADLVIAMPPWPSGQAAANILKFGIAKKFSLDAEVREL CCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH GTLNAFVGLEKGEIDIQPEVWRPNFDELVRKFVTEKGAVTLSTRAVPAWQGICATPEAAA HHHHHHEECCCCCEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHH TIKTVADLGDPAKTKFLDTDGDGRGEMWIGAAEWLSTGIERARAAGYGYAANLTLVEAKE HHHHHHHCCCCCHHCEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCC DVAMAAVDAAIATARPMVFYCYAPHHVFKLHQISRLEEPPHDPSKWKIAPPNDPLWVSKS HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECC SASTAWDAGQFQIGYATAFAKKHPEVAQFLQNVDFSPDEVTAMSYALQVERQTPVDYARK CCCCCCCCCCEEEEHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHEEEECCCCCHHHHHH WVESHAERIDGWAK HHHHHHHHCCCCCC >Mature Secondary Structure MRRGGEFFCAAALAVAMTAPAAAADLVIAMPPWPSGQAAANILKFGIAKKFSLDAEVREL CCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH GTLNAFVGLEKGEIDIQPEVWRPNFDELVRKFVTEKGAVTLSTRAVPAWQGICATPEAAA HHHHHHEECCCCCEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHH TIKTVADLGDPAKTKFLDTDGDGRGEMWIGAAEWLSTGIERARAAGYGYAANLTLVEAKE HHHHHHHCCCCCHHCEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCC DVAMAAVDAAIATARPMVFYCYAPHHVFKLHQISRLEEPPHDPSKWKIAPPNDPLWVSKS HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECC SASTAWDAGQFQIGYATAFAKKHPEVAQFLQNVDFSPDEVTAMSYALQVERQTPVDYARK CCCCCCCCCCEEEEHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHEEEECCCCCHHHHHH WVESHAERIDGWAK HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-proline [Periplasm]; H2O [C]
Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA