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The map label for this gene is 150397143

Identifier: 150397143

GI number: 150397143

Start: 1992834

End: 1993973

Strand: Reverse

Name: 150397143

Synonym: Smed_1941

Alternate gene names: NA

Gene position: 1993973-1992834 (Counterclockwise)

Preceding gene: 150397145

Following gene: 150397142

Centisome position: 52.72

GC content: 59.56

Gene sequence:

>1140_bases
ATGAAACACAAAGCCGAGATCGGGGAATCGTCGCGTCGGAAATTCCTGCGCGGCGCAGCAGTGGCCGGAGCGGCCATGGT
TGCAGCGCCGAGTATCGTCAGGGCACAAGGGCCGATCAGCATGCGCTGGCAGAGCACCTGGCCATCCAAAGACATCTTTC
ACGAGTTCGCGCTCGACTTCGCCAAGAAAGTCAACGACATGACGGGGGGCGACCTTAGAATAGAGGTGCTTCCGGCCGGT
GCCGTCGTGCCGGCATTCGGACTGCTCGACGCGGTGTCCGAAGGAACGCTCGACGGCGGCCATGGCGTGATGGTCTATCA
CTACGGCAAGCAGACGGCGCTGGCACTATGGGGATCGGGACCAGGCTTCGCCATGGATGCCAACATGATGCTGGCGTGGC
ACAAATATGGCGGCGGCAGGGACCTGCTCGCAAAACTCTACGAGTCCATAGGCGCAAATGTCGTATCGTTCCCCTACGGG
CCCATGCCGACACAGCCGCTGGGCTGGTTCAAGGAGCCGATCGCCAAGGCCGAGGATCTGAAAGGATTGAAGTTCCGCAC
CGTCGGTATCTCGATCGACGTGTTCACCGGGCTCGGCGCGGCGGTAAACGCCCTGCCGGGCGGTGAGATCGTGGCGGCAC
TCGATCGCGGACTGCTCGACGCTGCGGAATTCAACAATGCTTCGTCCGATCGACTGCTGGGCTTTCCCGACGTTTCGAAG
ATCTGCATGCTGCAAGGCTATCATCAAAACGCCGAGACGTTCGAGATCCTTTTCAACAAGGGAAAATTCGAGGGCCTGCC
AGACCAGTTGAAGGCAATCATAACCAACGCGGTGGACGCGGCTTCGGCAGACATGGCCTGGAAGGCGATCGACCGGTATT
CGACCGACTATCGCGAGTTGCAGTCGGCCGACAAGGTCAAATTCTACAAGACTCCCGAGGCCATCCTGAAGCGGCAGCTC
GAGGTCTATGACGAGGTCGTGAAGAGGAAATCCTCGGAAAATCCAGTGTTCAAGGAGGTCCTGCAATCCCAGATCACTTT
TGCCGAACGCGCAACCCGCTGGGAGCAGGATACGGTCGTCAACCGAAGGATGGCCTTCGATCATTATTTCGGGCCGGAGG
GGGTCGCCAAGTCGCTCTGA

Upstream 100 bases:

>100_bases
GGCGTCTCCGGACGATGCTAGTGCCTTCAGTCAATGTGAATGCTTGCGTGAAGATCCGCCCCGGGACGGGGGGGACGCGC
GCGCAATTTGGGAGGAAGAC

Downstream 100 bases:

>100_bases
CATAATCCGATCCTGCACATCGCCGGCATGCGGCGGTGATGTGCAGTCAGGACATGGCTATCCCCGGGGGTGCGCGTGAA
CATTCAGCATCTGCTTATGA

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; Trap Dicarboxylate Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP Dicarboxylate Transporter-DctP Subunit; TRAP Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Trap-T Transport System Periplasmic Component; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; C4-Dicarboxylate Transporter; TRAP Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKHKAEIGESSRRKFLRGAAVAGAAMVAAPSIVRAQGPISMRWQSTWPSKDIFHEFALDFAKKVNDMTGGDLRIEVLPAG
AVVPAFGLLDAVSEGTLDGGHGVMVYHYGKQTALALWGSGPGFAMDANMMLAWHKYGGGRDLLAKLYESIGANVVSFPYG
PMPTQPLGWFKEPIAKAEDLKGLKFRTVGISIDVFTGLGAAVNALPGGEIVAALDRGLLDAAEFNNASSDRLLGFPDVSK
ICMLQGYHQNAETFEILFNKGKFEGLPDQLKAIITNAVDAASADMAWKAIDRYSTDYRELQSADKVKFYKTPEAILKRQL
EVYDEVVKRKSSENPVFKEVLQSQITFAERATRWEQDTVVNRRMAFDHYFGPEGVAKSL

Sequences:

>Translated_379_residues
MKHKAEIGESSRRKFLRGAAVAGAAMVAAPSIVRAQGPISMRWQSTWPSKDIFHEFALDFAKKVNDMTGGDLRIEVLPAG
AVVPAFGLLDAVSEGTLDGGHGVMVYHYGKQTALALWGSGPGFAMDANMMLAWHKYGGGRDLLAKLYESIGANVVSFPYG
PMPTQPLGWFKEPIAKAEDLKGLKFRTVGISIDVFTGLGAAVNALPGGEIVAALDRGLLDAAEFNNASSDRLLGFPDVSK
ICMLQGYHQNAETFEILFNKGKFEGLPDQLKAIITNAVDAASADMAWKAIDRYSTDYRELQSADKVKFYKTPEAILKRQL
EVYDEVVKRKSSENPVFKEVLQSQITFAERATRWEQDTVVNRRMAFDHYFGPEGVAKSL
>Mature_379_residues
MKHKAEIGESSRRKFLRGAAVAGAAMVAAPSIVRAQGPISMRWQSTWPSKDIFHEFALDFAKKVNDMTGGDLRIEVLPAG
AVVPAFGLLDAVSEGTLDGGHGVMVYHYGKQTALALWGSGPGFAMDANMMLAWHKYGGGRDLLAKLYESIGANVVSFPYG
PMPTQPLGWFKEPIAKAEDLKGLKFRTVGISIDVFTGLGAAVNALPGGEIVAALDRGLLDAAEFNNASSDRLLGFPDVSK
ICMLQGYHQNAETFEILFNKGKFEGLPDQLKAIITNAVDAASADMAWKAIDRYSTDYRELQSADKVKFYKTPEAILKRQL
EVYDEVVKRKSSENPVFKEVLQSQITFAERATRWEQDTVVNRRMAFDHYFGPEGVAKSL

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41505; Mature: 41505

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKAEIGESSRRKFLRGAAVAGAAMVAAPSIVRAQGPISMRWQSTWPSKDIFHEFALDF
CCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEECCCCCCHHHHHHHHHHH
AKKVNDMTGGDLRIEVLPAGAVVPAFGLLDAVSEGTLDGGHGVMVYHYGKQTALALWGSG
HHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEECC
PGFAMDANMMLAWHKYGGGRDLLAKLYESIGANVVSFPYGPMPTQPLGWFKEPIAKAEDL
CCCEECCCEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHC
KGLKFRTVGISIDVFTGLGAAVNALPGGEIVAALDRGLLDAAEFNNASSDRLLGFPDVSK
CCCEEEEEEEEEEHHHCCCHHHHCCCCCHHHHHHHHCHHHHHHCCCCCCCCEECCCCHHH
ICMLQGYHQNAETFEILFNKGKFEGLPDQLKAIITNAVDAASADMAWKAIDRYSTDYREL
HHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QSADKVKFYKTPEAILKRQLEVYDEVVKRKSSENPVFKEVLQSQITFAERATRWEQDTVV
HCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
NRRMAFDHYFGPEGVAKSL
HHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure
MKHKAEIGESSRRKFLRGAAVAGAAMVAAPSIVRAQGPISMRWQSTWPSKDIFHEFALDF
CCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEECCCCCCHHHHHHHHHHH
AKKVNDMTGGDLRIEVLPAGAVVPAFGLLDAVSEGTLDGGHGVMVYHYGKQTALALWGSG
HHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEECC
PGFAMDANMMLAWHKYGGGRDLLAKLYESIGANVVSFPYGPMPTQPLGWFKEPIAKAEDL
CCCEECCCEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHC
KGLKFRTVGISIDVFTGLGAAVNALPGGEIVAALDRGLLDAAEFNNASSDRLLGFPDVSK
CCCEEEEEEEEEEHHHCCCHHHHCCCCCHHHHHHHHCHHHHHHCCCCCCCCEECCCCHHH
ICMLQGYHQNAETFEILFNKGKFEGLPDQLKAIITNAVDAASADMAWKAIDRYSTDYREL
HHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
QSADKVKFYKTPEAILKRQLEVYDEVVKRKSSENPVFKEVLQSQITFAERATRWEQDTVV
HCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
NRRMAFDHYFGPEGVAKSL
HHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA