| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is ftsZ2 [H]
Identifier: 150397145
GI number: 150397145
Start: 1996014
End: 1997051
Strand: Reverse
Name: ftsZ2 [H]
Synonym: Smed_1943
Alternate gene names: 150397145
Gene position: 1997051-1996014 (Counterclockwise)
Preceding gene: 150397147
Following gene: 150397143
Centisome position: 52.81
GC content: 63.87
Gene sequence:
>1038_bases ATGACGGAATACAAGAAGCCTGTTATCACCGAGATGCGTCCGAAAATCACGGTCATCGGCGTTGGCGGCGGGGGCGGAAA CGCGATCAACAACATGATCGCCGAGAACCTGCAGGGGGTCGATTTCATCGCCGCGAATACGGATGCGCAGGCGCTGGCGA CGTCGAAGGCGGAACGGCGGATCCAGTTGGGCGCTGCAATCACCGAGGGACTCGGCGCCGGTTCGGTTCCGGATATCGGC AATGCGGCCGCCCAGGAATCGATCGACGAAATCATGGACCACCTCGGCGGGACGCATATGTGCTTCGTTACGGCAGGCAT GGGCGGCGGTACGGGGACGGGAGCGGCACCGGTGATCGCGGAAGCGGCGCGGCGGGCGGGCATTCTCACGGTAGCGGTCG TCACCAAGCCTTTCAGCTTCGAGGGTCAGCGTCGCATGCAGACGGCGGAGCTCGGCGTCGATCGGCTGCGTGAGAGCGCA GACACCGTCATCGTCATCCCCAACCAGAATCTCTTTCGTATCGCCGACGCCAAGACCACCTTCGCTGACGCATTCATGAT TGCCGACCGGGTTCTCTATTCGGGCGTCAGTTGCATCACCGACCTGATCGTCAAGGAAGGCCTGATGAATCTCGACTTCG CGGACGTCAAAACAGTGATGAAGGGCATGGGCCGCGCGATGATGGGCACGGGTGAAGCGACCGGCGAGAACCGCGCCATG ATGGCGGCCGAAGCGGCGATTGCCAATCCGCTGCTCGACGAAGTTTCCATGCGCGGGGCCAAGGGCGTGCTGGTATCGAT CTCCGGTGGCATGGACATGACGCTCTTCGAGGTGGACGAGGCGGCGACCCGCATCCGCGAGGAAGTCTATGACGAGGCCG ACATCGTCGTCGGTGCGATCTTCGACCGGAGCCTCGACGGGACTTTCCGCGTGTCCGTTGTCGCGACCGGTCTCGATGGC AATCGCGGCGCACAGGCGACGGCGCCGGAGGCGATGAACGGCCAGGCCGCGGCCGTGCCGACTCGCACGCTGCAGTAG
Upstream 100 bases:
>100_bases GAATTCCTAGAATGGAAGCGACTGATTCGCGCCGCACCGCATCCCATCTCCGTGTTCCGAGTTTTCGGGCGGCCGGGGAA CTGCCCAAGGAGAAGAAACC
Downstream 100 bases:
>100_bases GTGCCGGCAGGCGAATGGGGCAAACCTTGCCTCATCGGCATCAATCAGGCACGCCGGCGCGGTGCAGATCGCTGACGAAG CGGTCGATGAATTTCTCGGA
Product: cell division protein FtsZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MTEYKKPVITEMRPKITVIGVGGGGGNAINNMIAENLQGVDFIAANTDAQALATSKAERRIQLGAAITEGLGAGSVPDIG NAAAQESIDEIMDHLGGTHMCFVTAGMGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESA DTVIVIPNQNLFRIADAKTTFADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATGENRAM MAAEAAIANPLLDEVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRSLDGTFRVSVVATGLDG NRGAQATAPEAMNGQAAAVPTRTLQ
Sequences:
>Translated_345_residues MTEYKKPVITEMRPKITVIGVGGGGGNAINNMIAENLQGVDFIAANTDAQALATSKAERRIQLGAAITEGLGAGSVPDIG NAAAQESIDEIMDHLGGTHMCFVTAGMGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESA DTVIVIPNQNLFRIADAKTTFADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATGENRAM MAAEAAIANPLLDEVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRSLDGTFRVSVVATGLDG NRGAQATAPEAMNGQAAAVPTRTLQ >Mature_344_residues TEYKKPVITEMRPKITVIGVGGGGGNAINNMIAENLQGVDFIAANTDAQALATSKAERRIQLGAAITEGLGAGSVPDIGN AAAQESIDEIMDHLGGTHMCFVTAGMGGGTGTGAAPVIAEAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESAD TVIVIPNQNLFRIADAKTTFADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATGENRAMM AAEAAIANPLLDEVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAIFDRSLDGTFRVSVVATGLDGN RGAQATAPEAMNGQAAAVPTRTLQ
Specific function: This protein is essential to the cell-division process. It seems to assemble into a dynamic ring on the inner surface of the cytoplasmic membrane at the place where division will occur, and the formation of the ring is the signal for septation to begin. B
COG id: COG0206
COG function: function code D; Cell division GTPase
Gene ontology:
Cell location: Cytoplasm. Note=Assembles at the inner surface of the cytoplasmic membrane (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsZ family [H]
Homologues:
Organism=Escherichia coli, GI1786284, Length=301, Percent_Identity=48.8372093023256, Blast_Score=252, Evalue=3e-68,
Paralogues:
None
Copy number: 320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020805 - InterPro: IPR000158 - InterPro: IPR008280 - InterPro: IPR018316 - InterPro: IPR003008 [H]
Pfam domain/function: PF00091 Tubulin [H]
EC number: NA
Molecular weight: Translated: 35938; Mature: 35806
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS01134 FTSZ_1 ; PS01135 FTSZ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEYKKPVITEMRPKITVIGVGGGGGNAINNMIAENLQGVDFIAANTDAQALATSKAERR CCCCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH IQLGAAITEGLGAGSVPDIGNAAAQESIDEIMDHLGGTHMCFVTAGMGGGTGTGAAPVIA HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHH EAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIVIPNQNLFRIADAKTT HHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCHH FADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATGENRAM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCHH MAAEAAIANPLLDEVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAI HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHCHHHEEEEEE FDRSLDGTFRVSVVATGLDGNRGAQATAPEAMNGQAAAVPTRTLQ CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure TEYKKPVITEMRPKITVIGVGGGGGNAINNMIAENLQGVDFIAANTDAQALATSKAERR CCCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH IQLGAAITEGLGAGSVPDIGNAAAQESIDEIMDHLGGTHMCFVTAGMGGGTGTGAAPVIA HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHH EAARRAGILTVAVVTKPFSFEGQRRMQTAELGVDRLRESADTVIVIPNQNLFRIADAKTT HHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCHH FADAFMIADRVLYSGVSCITDLIVKEGLMNLDFADVKTVMKGMGRAMMGTGEATGENRAM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCHH MAAEAAIANPLLDEVSMRGAKGVLVSISGGMDMTLFEVDEAATRIREEVYDEADIVVGAI HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHCHHHEEEEEE FDRSLDGTFRVSVVATGLDGNRGAQATAPEAMNGQAAAVPTRTLQ CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8144471; 11481430 [H]