| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397127
Identifier: 150397127
GI number: 150397127
Start: 1980412
End: 1981419
Strand: Direct
Name: 150397127
Synonym: Smed_1925
Alternate gene names: NA
Gene position: 1980412-1981419 (Clockwise)
Preceding gene: 150397126
Following gene: 150397128
Centisome position: 52.37
GC content: 59.72
Gene sequence:
>1008_bases ATGAACGCAATCACGAAATTCGACCTGTCGCCGCGCCAGATTGCGCTGGTCCAGCAGACCGTGGCCAAAGACTGCAACGC CGACGAGTTCAACTTGTTCATGGAAGTCGCCCGGGCGAAGGGCCTCGATCCCTTCCTCGGACAGATCATTCCAATGGTCT TCTCGAAGGACAATGCCAAGAAGCGGAAGATGACGATCATCATCAGCCGCGACGGTCAGCGCGTCATTGCGCAACGCTGC GGCGACTATCGGCCGGCCAGCAAGCCAGCAACGTATGAGATCGATCCGTCGCTCAAGGGGCCGACCAATCCTCAGGGCAT CATCTCTGCGACGGTCTACCTCTGGAAGCAGGACCCGAAATCGGGCGACTGGTACGAGGTTGCCGGTCAGGCCTATTGGG AGGAATTCGCGCCAATCTCTCACTCGCCCGATCAGTACAACTACGTTGAAACCGGCGATACCTGGCCAGACGGAAAGCCC AAGAAGATGAAGAAGCTGAAGGACGGCGCCGTTCCTTCGCTCGACGATTCCGGTAACTGGTGCCGGATGCCGCGCCTCAT GATCGCCAAGTGCGCCGAGATGCAGGCACTGCGCGCGGGCTGGCCCGAGCAGTTTACCGGCCTCTATGATGAAGCCGAAA TGGACCGCGCCAAGATCATCGATCTGACCGCGTCCGAGATCGTCGAGCACGAGCGCGAGGAAAACCGCCTCAAGGCCGTC GGCGCCTCGAATTCCATCACCATTACCTGGGGAGACAATTGGGCGCTTGAGAATGTGCCTGTCGGTGAGTTCTTCGACCG CGCCTGCGAGTTCATCAAAAACGAACCGCCGGCAAAGGTAGCGAAGTGGCGCGACGCAAATCGGGAACCGCTTAAACTCT TTTGGTCAAAGCATCCCGGCGACGCTCTGGAACTGAAAAAGAGGCTCGAAGCCGCAATCGCGCGTGCCCCGGCAAAGAGT GCCGTGACCGACGCCGAGCTTCGCACCCACGTTTTGGCGGCGGGCTGA
Upstream 100 bases:
>100_bases CAAGAAGGCTTTGGCCGCCGCGATCAAAGCCGGCGAGCAAGTGCCCGGCGCCAACCTCGACAACGGCAGCATCTCTCTTT CCGTCCGGAGGAAGTAATCC
Downstream 100 bases:
>100_bases CATGAGCGGCCCGGTCCTATTGCAATGGAACGGCGAGGCCTTCCAGCCGGCAAACCGGCACTGGGCCCGCGAGTGCGACA AGCGTTTCGTGGTCGGCGAG
Product: phage recombination protein Bet
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNAITKFDLSPRQIALVQQTVAKDCNADEFNLFMEVARAKGLDPFLGQIIPMVFSKDNAKKRKMTIIISRDGQRVIAQRC GDYRPASKPATYEIDPSLKGPTNPQGIISATVYLWKQDPKSGDWYEVAGQAYWEEFAPISHSPDQYNYVETGDTWPDGKP KKMKKLKDGAVPSLDDSGNWCRMPRLMIAKCAEMQALRAGWPEQFTGLYDEAEMDRAKIIDLTASEIVEHEREENRLKAV GASNSITITWGDNWALENVPVGEFFDRACEFIKNEPPAKVAKWRDANREPLKLFWSKHPGDALELKKRLEAAIARAPAKS AVTDAELRTHVLAAG
Sequences:
>Translated_335_residues MNAITKFDLSPRQIALVQQTVAKDCNADEFNLFMEVARAKGLDPFLGQIIPMVFSKDNAKKRKMTIIISRDGQRVIAQRC GDYRPASKPATYEIDPSLKGPTNPQGIISATVYLWKQDPKSGDWYEVAGQAYWEEFAPISHSPDQYNYVETGDTWPDGKP KKMKKLKDGAVPSLDDSGNWCRMPRLMIAKCAEMQALRAGWPEQFTGLYDEAEMDRAKIIDLTASEIVEHEREENRLKAV GASNSITITWGDNWALENVPVGEFFDRACEFIKNEPPAKVAKWRDANREPLKLFWSKHPGDALELKKRLEAAIARAPAKS AVTDAELRTHVLAAG >Mature_335_residues MNAITKFDLSPRQIALVQQTVAKDCNADEFNLFMEVARAKGLDPFLGQIIPMVFSKDNAKKRKMTIIISRDGQRVIAQRC GDYRPASKPATYEIDPSLKGPTNPQGIISATVYLWKQDPKSGDWYEVAGQAYWEEFAPISHSPDQYNYVETGDTWPDGKP KKMKKLKDGAVPSLDDSGNWCRMPRLMIAKCAEMQALRAGWPEQFTGLYDEAEMDRAKIIDLTASEIVEHEREENRLKAV GASNSITITWGDNWALENVPVGEFFDRACEFIKNEPPAKVAKWRDANREPLKLFWSKHPGDALELKKRLEAAIARAPAKS AVTDAELRTHVLAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37628; Mature: 37628
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAITKFDLSPRQIALVQQTVAKDCNADEFNLFMEVARAKGLDPFLGQIIPMVFSKDNAK CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC KRKMTIIISRDGQRVIAQRCGDYRPASKPATYEIDPSLKGPTNPQGIISATVYLWKQDPK CEEEEEEEECCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCC SGDWYEVAGQAYWEEFAPISHSPDQYNYVETGDTWPDGKPKKMKKLKDGAVPSLDDSGNW CCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCE CRMPRLMIAKCAEMQALRAGWPEQFTGLYDEAEMDRAKIIDLTASEIVEHEREENRLKAV ECCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCHHHEEECHHHHHHHHHHHHHHEEEE GASNSITITWGDNWALENVPVGEFFDRACEFIKNEPPAKVAKWRDANREPLKLFWSKHPG CCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHEECCCCC DALELKKRLEAAIARAPAKSAVTDAELRTHVLAAG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNAITKFDLSPRQIALVQQTVAKDCNADEFNLFMEVARAKGLDPFLGQIIPMVFSKDNAK CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC KRKMTIIISRDGQRVIAQRCGDYRPASKPATYEIDPSLKGPTNPQGIISATVYLWKQDPK CEEEEEEEECCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCC SGDWYEVAGQAYWEEFAPISHSPDQYNYVETGDTWPDGKPKKMKKLKDGAVPSLDDSGNW CCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCE CRMPRLMIAKCAEMQALRAGWPEQFTGLYDEAEMDRAKIIDLTASEIVEHEREENRLKAV ECCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCHHHEEECHHHHHHHHHHHHHHEEEE GASNSITITWGDNWALENVPVGEFFDRACEFIKNEPPAKVAKWRDANREPLKLFWSKHPG CCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHEECCCCC DALELKKRLEAAIARAPAKSAVTDAELRTHVLAAG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA