Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397127

Identifier: 150397127

GI number: 150397127

Start: 1980412

End: 1981419

Strand: Direct

Name: 150397127

Synonym: Smed_1925

Alternate gene names: NA

Gene position: 1980412-1981419 (Clockwise)

Preceding gene: 150397126

Following gene: 150397128

Centisome position: 52.37

GC content: 59.72

Gene sequence:

>1008_bases
ATGAACGCAATCACGAAATTCGACCTGTCGCCGCGCCAGATTGCGCTGGTCCAGCAGACCGTGGCCAAAGACTGCAACGC
CGACGAGTTCAACTTGTTCATGGAAGTCGCCCGGGCGAAGGGCCTCGATCCCTTCCTCGGACAGATCATTCCAATGGTCT
TCTCGAAGGACAATGCCAAGAAGCGGAAGATGACGATCATCATCAGCCGCGACGGTCAGCGCGTCATTGCGCAACGCTGC
GGCGACTATCGGCCGGCCAGCAAGCCAGCAACGTATGAGATCGATCCGTCGCTCAAGGGGCCGACCAATCCTCAGGGCAT
CATCTCTGCGACGGTCTACCTCTGGAAGCAGGACCCGAAATCGGGCGACTGGTACGAGGTTGCCGGTCAGGCCTATTGGG
AGGAATTCGCGCCAATCTCTCACTCGCCCGATCAGTACAACTACGTTGAAACCGGCGATACCTGGCCAGACGGAAAGCCC
AAGAAGATGAAGAAGCTGAAGGACGGCGCCGTTCCTTCGCTCGACGATTCCGGTAACTGGTGCCGGATGCCGCGCCTCAT
GATCGCCAAGTGCGCCGAGATGCAGGCACTGCGCGCGGGCTGGCCCGAGCAGTTTACCGGCCTCTATGATGAAGCCGAAA
TGGACCGCGCCAAGATCATCGATCTGACCGCGTCCGAGATCGTCGAGCACGAGCGCGAGGAAAACCGCCTCAAGGCCGTC
GGCGCCTCGAATTCCATCACCATTACCTGGGGAGACAATTGGGCGCTTGAGAATGTGCCTGTCGGTGAGTTCTTCGACCG
CGCCTGCGAGTTCATCAAAAACGAACCGCCGGCAAAGGTAGCGAAGTGGCGCGACGCAAATCGGGAACCGCTTAAACTCT
TTTGGTCAAAGCATCCCGGCGACGCTCTGGAACTGAAAAAGAGGCTCGAAGCCGCAATCGCGCGTGCCCCGGCAAAGAGT
GCCGTGACCGACGCCGAGCTTCGCACCCACGTTTTGGCGGCGGGCTGA

Upstream 100 bases:

>100_bases
CAAGAAGGCTTTGGCCGCCGCGATCAAAGCCGGCGAGCAAGTGCCCGGCGCCAACCTCGACAACGGCAGCATCTCTCTTT
CCGTCCGGAGGAAGTAATCC

Downstream 100 bases:

>100_bases
CATGAGCGGCCCGGTCCTATTGCAATGGAACGGCGAGGCCTTCCAGCCGGCAAACCGGCACTGGGCCCGCGAGTGCGACA
AGCGTTTCGTGGTCGGCGAG

Product: phage recombination protein Bet

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MNAITKFDLSPRQIALVQQTVAKDCNADEFNLFMEVARAKGLDPFLGQIIPMVFSKDNAKKRKMTIIISRDGQRVIAQRC
GDYRPASKPATYEIDPSLKGPTNPQGIISATVYLWKQDPKSGDWYEVAGQAYWEEFAPISHSPDQYNYVETGDTWPDGKP
KKMKKLKDGAVPSLDDSGNWCRMPRLMIAKCAEMQALRAGWPEQFTGLYDEAEMDRAKIIDLTASEIVEHEREENRLKAV
GASNSITITWGDNWALENVPVGEFFDRACEFIKNEPPAKVAKWRDANREPLKLFWSKHPGDALELKKRLEAAIARAPAKS
AVTDAELRTHVLAAG

Sequences:

>Translated_335_residues
MNAITKFDLSPRQIALVQQTVAKDCNADEFNLFMEVARAKGLDPFLGQIIPMVFSKDNAKKRKMTIIISRDGQRVIAQRC
GDYRPASKPATYEIDPSLKGPTNPQGIISATVYLWKQDPKSGDWYEVAGQAYWEEFAPISHSPDQYNYVETGDTWPDGKP
KKMKKLKDGAVPSLDDSGNWCRMPRLMIAKCAEMQALRAGWPEQFTGLYDEAEMDRAKIIDLTASEIVEHEREENRLKAV
GASNSITITWGDNWALENVPVGEFFDRACEFIKNEPPAKVAKWRDANREPLKLFWSKHPGDALELKKRLEAAIARAPAKS
AVTDAELRTHVLAAG
>Mature_335_residues
MNAITKFDLSPRQIALVQQTVAKDCNADEFNLFMEVARAKGLDPFLGQIIPMVFSKDNAKKRKMTIIISRDGQRVIAQRC
GDYRPASKPATYEIDPSLKGPTNPQGIISATVYLWKQDPKSGDWYEVAGQAYWEEFAPISHSPDQYNYVETGDTWPDGKP
KKMKKLKDGAVPSLDDSGNWCRMPRLMIAKCAEMQALRAGWPEQFTGLYDEAEMDRAKIIDLTASEIVEHEREENRLKAV
GASNSITITWGDNWALENVPVGEFFDRACEFIKNEPPAKVAKWRDANREPLKLFWSKHPGDALELKKRLEAAIARAPAKS
AVTDAELRTHVLAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37628; Mature: 37628

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAITKFDLSPRQIALVQQTVAKDCNADEFNLFMEVARAKGLDPFLGQIIPMVFSKDNAK
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
KRKMTIIISRDGQRVIAQRCGDYRPASKPATYEIDPSLKGPTNPQGIISATVYLWKQDPK
CEEEEEEEECCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCC
SGDWYEVAGQAYWEEFAPISHSPDQYNYVETGDTWPDGKPKKMKKLKDGAVPSLDDSGNW
CCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCE
CRMPRLMIAKCAEMQALRAGWPEQFTGLYDEAEMDRAKIIDLTASEIVEHEREENRLKAV
ECCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCHHHEEECHHHHHHHHHHHHHHEEEE
GASNSITITWGDNWALENVPVGEFFDRACEFIKNEPPAKVAKWRDANREPLKLFWSKHPG
CCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHEECCCCC
DALELKKRLEAAIARAPAKSAVTDAELRTHVLAAG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNAITKFDLSPRQIALVQQTVAKDCNADEFNLFMEVARAKGLDPFLGQIIPMVFSKDNAK
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
KRKMTIIISRDGQRVIAQRCGDYRPASKPATYEIDPSLKGPTNPQGIISATVYLWKQDPK
CEEEEEEEECCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCC
SGDWYEVAGQAYWEEFAPISHSPDQYNYVETGDTWPDGKPKKMKKLKDGAVPSLDDSGNW
CCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCE
CRMPRLMIAKCAEMQALRAGWPEQFTGLYDEAEMDRAKIIDLTASEIVEHEREENRLKAV
ECCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCHHHEEECHHHHHHHHHHHHHHEEEE
GASNSITITWGDNWALENVPVGEFFDRACEFIKNEPPAKVAKWRDANREPLKLFWSKHPG
CCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHEECCCCC
DALELKKRLEAAIARAPAKSAVTDAELRTHVLAAG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA