| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397107
Identifier: 150397107
GI number: 150397107
Start: 1969520
End: 1969954
Strand: Reverse
Name: 150397107
Synonym: Smed_1905
Alternate gene names: NA
Gene position: 1969954-1969520 (Counterclockwise)
Preceding gene: 150397108
Following gene: 150397106
Centisome position: 52.09
GC content: 63.22
Gene sequence:
>435_bases ATGACCATCCAGCACCGCACCGTCGACATCGAGGCTGCTGCGAAGCTCTGGAGGGATGATCTCCCTGCCTCCCAGATCGC CAAGCGCTTTGGCGTCAGCCGCAACGTCATTGTCGGACTGGCATTCCGCAAACGCGGTCTCTTCCCGTGGCGCGGCGACT CTGGGAAGAAGTCTCGCGCACCCGGCCAAGCGAAGACGACGCGGCCTCGCAAGCTGGCGCCGGAACTGAAGCGGGAACCG GAGATCGCGGCGACTGCCTATGACGCTGAGCGGCTCCAATCCGCAAAGCCCCTCCACCATCTCTCGGCCCGCGAATGCTG CTGGCCCCTAAACACCGGCGGCCCGTACCTGTTCTGTGCGGCGGAAACAACGGGTCGCTACTGCCGAAACCACCATGCTC GGTCATTGCCGAAGAAGAACGAGGGAAAATCATGA
Upstream 100 bases:
>100_bases TGCCAGACGCGCGCTCGGTCAGCGCCGAGCAGATGGCCTACCGCCGGAAGATCGAGATGGACCTCGACGCCGTCGAGCCG ATCGACGAGGAGCGCGCGGC
Downstream 100 bases:
>100_bases GCAGATCACGTTGGTACGCAATTCGTACGGCCCCCGGGTATCAGCGCATGGCGGCCGTGGACGAGCGCCTCCCGGAGAGT CGGCGTATGGAATCCATCAT
Product: GcrA cell cycle regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTIQHRTVDIEAAAKLWRDDLPASQIAKRFGVSRNVIVGLAFRKRGLFPWRGDSGKKSRAPGQAKTTRPRKLAPELKREP EIAATAYDAERLQSAKPLHHLSARECCWPLNTGGPYLFCAAETTGRYCRNHHARSLPKKNEGKS
Sequences:
>Translated_144_residues MTIQHRTVDIEAAAKLWRDDLPASQIAKRFGVSRNVIVGLAFRKRGLFPWRGDSGKKSRAPGQAKTTRPRKLAPELKREP EIAATAYDAERLQSAKPLHHLSARECCWPLNTGGPYLFCAAETTGRYCRNHHARSLPKKNEGKS >Mature_143_residues TIQHRTVDIEAAAKLWRDDLPASQIAKRFGVSRNVIVGLAFRKRGLFPWRGDSGKKSRAPGQAKTTRPRKLAPELKREPE IAATAYDAERLQSAKPLHHLSARECCWPLNTGGPYLFCAAETTGRYCRNHHARSLPKKNEGKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16146; Mature: 16014
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQHRTVDIEAAAKLWRDDLPASQIAKRFGVSRNVIVGLAFRKRGLFPWRGDSGKKSRA CCCCCCEECHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCC PGQAKTTRPRKLAPELKREPEIAATAYDAERLQSAKPLHHLSARECCWPLNTGGPYLFCA CCCCCCCCCHHCCHHHHCCCCCCHHHHCHHHHHHCCCHHHCCHHHCCCCCCCCCCEEEEE AETTGRYCRNHHARSLPKKNEGKS CCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TIQHRTVDIEAAAKLWRDDLPASQIAKRFGVSRNVIVGLAFRKRGLFPWRGDSGKKSRA CCCCCEECHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCC PGQAKTTRPRKLAPELKREPEIAATAYDAERLQSAKPLHHLSARECCWPLNTGGPYLFCA CCCCCCCCCHHCCHHHHCCCCCCHHHHCHHHHHHCCCHHHCCHHHCCCCCCCCCCEEEEE AETTGRYCRNHHARSLPKKNEGKS CCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA