| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397106
Identifier: 150397106
GI number: 150397106
Start: 1968906
End: 1969523
Strand: Reverse
Name: 150397106
Synonym: Smed_1904
Alternate gene names: NA
Gene position: 1969523-1968906 (Counterclockwise)
Preceding gene: 150397107
Following gene: 150397104
Centisome position: 52.08
GC content: 58.41
Gene sequence:
>618_bases ATGAGCAGATCACGTTGGTACGCAATTCGTACGGCCCCCGGGTATCAGCGCATGGCGGCCGTGGACGAGCGCCTCCCGGA GAGTCGGCGTATGGAATCCATCATCGAGCGGAACTGCCGCAAGGACGGCTTCGACATCTTCATGCCGTCGTTTTACAAGG AGTTGAAGCACCATCGGACGAACGAGATCATCGAGAAGCGGTTTCCGTTCCTGGTCGGGTATGCCTTCGTGAACCTGCCG AGGTTGAACTTCGAGGAGCTCCGCCGCGTCGACGGTGCCGTGTGTTTCCTGCGCGGTGCCAACTATGGACCGCTCGAGTT TCCCAGCGCAACGATCGAGGCTCTGTATTTCGCCGAGCACGAGCGCCGGCAAGCCTTCCTCTACGAACAGCACTGCCGGA AGGAGAACGAGCGCCACGAGCAGATCCAGCACCTGCGCGGCCAACTTCGCAAGATCCTGCCTAAGGGAAGAAAAGCCCGC GTCTCAATGGTCGACCAGGCGGAGAGGGCTATAGATTCTCTAAGCCCGCAGATCAAAGAGCGGGTGCAGAAAATTATCAG TGAACTGAATAGTCTCACGGCAGACGCGGCGGTTGAAAATCTTCGGCAAGCCGTATAG
Upstream 100 bases:
>100_bases ACACCGGCGGCCCGTACCTGTTCTGTGCGGCGGAAACAACGGGTCGCTACTGCCGAAACCACCATGCTCGGTCATTGCCG AAGAAGAACGAGGGAAAATC
Downstream 100 bases:
>100_bases ATTTCCTGCAGTGATTTGCGGTTGTCCAGTTGCGGACCTCACAGAGGGAATACTCGCCGGACCGCTGCCGAAACTTCACA TTCGGCGCATAGGAGAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSRSRWYAIRTAPGYQRMAAVDERLPESRRMESIIERNCRKDGFDIFMPSFYKELKHHRTNEIIEKRFPFLVGYAFVNLP RLNFEELRRVDGAVCFLRGANYGPLEFPSATIEALYFAEHERRQAFLYEQHCRKENERHEQIQHLRGQLRKILPKGRKAR VSMVDQAERAIDSLSPQIKERVQKIISELNSLTADAAVENLRQAV
Sequences:
>Translated_205_residues MSRSRWYAIRTAPGYQRMAAVDERLPESRRMESIIERNCRKDGFDIFMPSFYKELKHHRTNEIIEKRFPFLVGYAFVNLP RLNFEELRRVDGAVCFLRGANYGPLEFPSATIEALYFAEHERRQAFLYEQHCRKENERHEQIQHLRGQLRKILPKGRKAR VSMVDQAERAIDSLSPQIKERVQKIISELNSLTADAAVENLRQAV >Mature_204_residues SRSRWYAIRTAPGYQRMAAVDERLPESRRMESIIERNCRKDGFDIFMPSFYKELKHHRTNEIIEKRFPFLVGYAFVNLPR LNFEELRRVDGAVCFLRGANYGPLEFPSATIEALYFAEHERRQAFLYEQHCRKENERHEQIQHLRGQLRKILPKGRKARV SMVDQAERAIDSLSPQIKERVQKIISELNSLTADAAVENLRQAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24166; Mature: 24035
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSRWYAIRTAPGYQRMAAVDERLPESRRMESIIERNCRKDGFDIFMPSFYKELKHHRT CCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NEIIEKRFPFLVGYAFVNLPRLNFEELRRVDGAVCFLRGANYGPLEFPSATIEALYFAEH HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHH ERRQAFLYEQHCRKENERHEQIQHLRGQLRKILPKGRKARVSMVDQAERAIDSLSPQIKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHH RVQKIISELNSLTADAAVENLRQAV HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRSRWYAIRTAPGYQRMAAVDERLPESRRMESIIERNCRKDGFDIFMPSFYKELKHHRT CCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NEIIEKRFPFLVGYAFVNLPRLNFEELRRVDGAVCFLRGANYGPLEFPSATIEALYFAEH HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHH ERRQAFLYEQHCRKENERHEQIQHLRGQLRKILPKGRKARVSMVDQAERAIDSLSPQIKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHH RVQKIISELNSLTADAAVENLRQAV HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA