Click here to switch to the map view.

The map label for this gene is 150397056

Identifier: 150397056

GI number: 150397056

Start: 1928076

End: 1928591

Strand: Reverse

Name: 150397056

Synonym: Smed_1853

Alternate gene names: NA

Gene position: 1928591-1928076 (Counterclockwise)

Preceding gene: 150397060

Following gene: 150397055

Centisome position: 51.0

GC content: 63.76

Gene sequence:

>516_bases
ATGGCGGAGAATTCGGAACTGGCAAGGCAGAAGAGACACTACGGCCTCATCCGGGAGCGGCTGACACGGCCGGGCATAGC
GGCGCGCAGAGCCGCTCACATCGAAGAGCTCGAGCGGCAGCTGGTCGCGTTTGCCCGGGACAGCGAAGCGAAAGAGCGGC
AGATCGCCAAGCTCGAAATCGATCTTGCCGATGCGGCAGCGCGGCTGCTGGCGCAGGCGCGCATCCTTCTTGCCGACCGA
GAGAAGCAGGGGTCGGACGGAGAAGATGGCGACAGGCCGTCGGTCGACGAAATCGTTGCCGTGGTCCTCAAGGATTTTCC
AGACGTAAGCTGGGACGACATCATCAGCGTGCGCCGTGAGCGCCGGCTAGTGAGGCCGAGACATGCCTGCATGCGTGCCG
TCTATGAGCAACGCCGTGATCTCTCGCTGGCGGGGATCGGCCGAATCTTTCACCGTGATCACACGACCGTGCTTGCCGCC
GTGCAGGCTGCCGGCGGGAGCGAGACGGTATATTGA

Upstream 100 bases:

>100_bases
ATCATGTTGACAACACGACATTATAGATGTCATTCATAAAGTCAAGCAGCGGCGGATGCGCTTGGCTGCCGGGATCGCCG
AAAATGGAACTGGAGAAGCG

Downstream 100 bases:

>100_bases
GCTGATATCGCTGCCCGGATCGTACCGGGCGCTTGCTTGCTGGCCCACGTTCTTATCCCCCGACTTCCGCCCATCCCCGC
CCGCGCAAGGGCAGGGCGCG

Product: chromosomal replication initiator DnaA domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MAENSELARQKRHYGLIRERLTRPGIAARRAAHIEELERQLVAFARDSEAKERQIAKLEIDLADAAARLLAQARILLADR
EKQGSDGEDGDRPSVDEIVAVVLKDFPDVSWDDIISVRRERRLVRPRHACMRAVYEQRRDLSLAGIGRIFHRDHTTVLAA
VQAAGGSETVY

Sequences:

>Translated_171_residues
MAENSELARQKRHYGLIRERLTRPGIAARRAAHIEELERQLVAFARDSEAKERQIAKLEIDLADAAARLLAQARILLADR
EKQGSDGEDGDRPSVDEIVAVVLKDFPDVSWDDIISVRRERRLVRPRHACMRAVYEQRRDLSLAGIGRIFHRDHTTVLAA
VQAAGGSETVY
>Mature_170_residues
AENSELARQKRHYGLIRERLTRPGIAARRAAHIEELERQLVAFARDSEAKERQIAKLEIDLADAAARLLAQARILLADRE
KQGSDGEDGDRPSVDEIVAVVLKDFPDVSWDDIISVRRERRLVRPRHACMRAVYEQRRDLSLAGIGRIFHRDHTTVLAAV
QAAGGSETVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19316; Mature: 19185

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENSELARQKRHYGLIRERLTRPGIAARRAAHIEELERQLVAFARDSEAKERQIAKLEI
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DLADAAARLLAQARILLADREKQGSDGEDGDRPSVDEIVAVVLKDFPDVSWDDIISVRRE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
RRLVRPRHACMRAVYEQRRDLSLAGIGRIFHRDHTTVLAAVQAAGGSETVY
HHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AENSELARQKRHYGLIRERLTRPGIAARRAAHIEELERQLVAFARDSEAKERQIAKLEI
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DLADAAARLLAQARILLADREKQGSDGEDGDRPSVDEIVAVVLKDFPDVSWDDIISVRRE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
RRLVRPRHACMRAVYEQRRDLSLAGIGRIFHRDHTTVLAAVQAAGGSETVY
HHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA