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The map label for this gene is 150397060

Identifier: 150397060

GI number: 150397060

Start: 1930258

End: 1930983

Strand: Reverse

Name: 150397060

Synonym: Smed_1857

Alternate gene names: NA

Gene position: 1930983-1930258 (Counterclockwise)

Preceding gene: 150397061

Following gene: 150397056

Centisome position: 51.06

GC content: 61.85

Gene sequence:

>726_bases
ATGACGAAGCTTGGCAAGACAGGTACGGGATCCGGCGGCGCGGCACTTTTCGCCGCAGCGATCATGATAGCGGCATTTGG
CCCCAGTGCGGCCGCGGCGGCGGACTGCAAGAGCACGGCCGGGCCTCGCACGGACTGGCAGGACTGTAACAAAAAACAGA
TCATGCTGCGTGGCAGCGACCTGCCGGAAAGCAATCTTGTGAATGCCGACTTTACCATGACGGACTTGCGCGGGGCCAAT
CTGAATTCCGCTAATCTGGAGAAGGCGACGCTCGTTCGTGCTTCGCTTGCCGGCGCCAGGGCGGACAAGGCGAATTTCAG
CAGGGTCGAGGCCTATCGGGGTAATTTCTCAGCAATCTCCGCGGAAAACGCCTCCTTTGCGAGCGCCGAGCTACAGCGCA
CCGATTTTACCGGCGCGCGGCTCACAGGTGCGGACTTCGAAAAGGCGGAACTCGGGCGCGCGACTTTCGACCAGGCGGTG
TTGACGGGCGCCCGCTTCTCCATGGCCAATCTTTCGCGAGCCAAGCTGAGCGGCGCCGTTTTCGAAGGTCCGATCGACCT
GGACCGCGCCTTCCTCTTCCTTACCAGAATAGAAGGTGTCGACCTTTCCAGAGCGTCCGGCCTCACGCAGGAACAGGTCG
ATCTCACCTGCGGCGACGACGCGACCAAACTGCCGTCCGGTCTTTCCACTCCCGCGAAATGGCCTTGCCCGCCTGACGAC
GATTGA

Upstream 100 bases:

>100_bases
GTCGTAACACATTGAATTCCACGGAGTTCTTTGCGGCGCTTCTGAAGCCTGCCGTAAAATGGGGCGGCTGATATTTTGAC
TGGCCGGCAGGAGCGGCGAT

Downstream 100 bases:

>100_bases
AGCGGCGGAGGGCGGCACATCAGTCACCGCTGCGTTCAGCAAACTCAGCAGATACAAGCCTGAGGGCGGGGACCGTCGCC
CGCGGCGCGATGCCGGTTGA

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTKLGKTGTGSGGAALFAAAIMIAAFGPSAAAAADCKSTAGPRTDWQDCNKKQIMLRGSDLPESNLVNADFTMTDLRGAN
LNSANLEKATLVRASLAGARADKANFSRVEAYRGNFSAISAENASFASAELQRTDFTGARLTGADFEKAELGRATFDQAV
LTGARFSMANLSRAKLSGAVFEGPIDLDRAFLFLTRIEGVDLSRASGLTQEQVDLTCGDDATKLPSGLSTPAKWPCPPDD
D

Sequences:

>Translated_241_residues
MTKLGKTGTGSGGAALFAAAIMIAAFGPSAAAAADCKSTAGPRTDWQDCNKKQIMLRGSDLPESNLVNADFTMTDLRGAN
LNSANLEKATLVRASLAGARADKANFSRVEAYRGNFSAISAENASFASAELQRTDFTGARLTGADFEKAELGRATFDQAV
LTGARFSMANLSRAKLSGAVFEGPIDLDRAFLFLTRIEGVDLSRASGLTQEQVDLTCGDDATKLPSGLSTPAKWPCPPDD
D
>Mature_240_residues
TKLGKTGTGSGGAALFAAAIMIAAFGPSAAAAADCKSTAGPRTDWQDCNKKQIMLRGSDLPESNLVNADFTMTDLRGANL
NSANLEKATLVRASLAGARADKANFSRVEAYRGNFSAISAENASFASAELQRTDFTGARLTGADFEKAELGRATFDQAVL
TGARFSMANLSRAKLSGAVFEGPIDLDRAFLFLTRIEGVDLSRASGLTQEQVDLTCGDDATKLPSGLSTPAKWPCPPDDD

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 25225; Mature: 25094

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLGKTGTGSGGAALFAAAIMIAAFGPSAAAAADCKSTAGPRTDWQDCNKKQIMLRGSD
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCCCEEEEEECCC
LPESNLVNADFTMTDLRGANLNSANLEKATLVRASLAGARADKANFSRVEAYRGNFSAIS
CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEE
AENASFASAELQRTDFTGARLTGADFEKAELGRATFDQAVLTGARFSMANLSRAKLSGAV
CCCCCHHHHHHHHCCCCCCEECCCCCCHHHHCHHHHHHHHHHCCHHHHHHHHHHHHCCCE
FEGPIDLDRAFLFLTRIEGVDLSRASGLTQEQVDLTCGDDATKLPSGLSTPAKWPCPPDD
EECCCCHHHHHHEEHHHCCCCCHHHCCCCHHHEEEEECCCHHHCCCCCCCCCCCCCCCCC
D
C
>Mature Secondary Structure 
TKLGKTGTGSGGAALFAAAIMIAAFGPSAAAAADCKSTAGPRTDWQDCNKKQIMLRGSD
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCCCEEEEEECCC
LPESNLVNADFTMTDLRGANLNSANLEKATLVRASLAGARADKANFSRVEAYRGNFSAIS
CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEE
AENASFASAELQRTDFTGARLTGADFEKAELGRATFDQAVLTGARFSMANLSRAKLSGAV
CCCCCHHHHHHHHCCCCCCEECCCCCCHHHHCHHHHHHHHHHCCHHHHHHHHHHHHCCCE
FEGPIDLDRAFLFLTRIEGVDLSRASGLTQEQVDLTCGDDATKLPSGLSTPAKWPCPPDD
EECCCCHHHHHHEEHHHCCCCCHHHCCCCHHHEEEEECCCHHHCCCCCCCCCCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]