Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397033

Identifier: 150397033

GI number: 150397033

Start: 1909594

End: 1910589

Strand: Reverse

Name: 150397033

Synonym: Smed_1830

Alternate gene names: NA

Gene position: 1910589-1909594 (Counterclockwise)

Preceding gene: 150397034

Following gene: 150397032

Centisome position: 50.52

GC content: 60.84

Gene sequence:

>996_bases
ATGGCAGCTCTTGCCAATACCTATATGACCACTCAAGCCGTGGGCAACCGCGAAGAACTCTCCGATGTGGTCTCGCGCAT
CACGCCCGAGGACACCCCGATCTATTCGTTCATCGAAAAGGGCAAGTGCGTTTCCATTCACCCCGAATGGGAAACGGACG
AGCTTGCTGCTCCGGGGGAGAACATCAAGAGCGAAGGTGACGAATATGCCTTCGGCGCCATCACCCCGCCCGAGCGCCTG
GGCAACTATACCCAGATCATGCGCAAGGACTGGATCATCTCCGGTACGCAGGAAGTCGTTTCCGAGGCCGGCAACGTCCA
GAAGCGCAAATACCAGAAGCTGAAGAAGGGCATCGAAATCCGCAAGGACGTCGAATATGCCATCGTCGACACCAACGCCT
CGGTCGCCGGCGCGACGCGCGAATTCGGTTCGCTCAACACCTGGATCGAGACCAATGTTTCCCGCGGTGCCGGCGGCGCC
AATGGCGGTTTCGACAATGCGACCGGGCTTACGGTGGCCCCGACCGATGGCGAGCAGCGCGCATTCACCAAATCCATTTT
GGATAGCGTGATGCAGGCGGGCTATCAGAGCGGCGCCAATTTCCGCCACGTCTCGGTATCGCCCTACGTCAAGAGCGTGT
TCGTCACCTTCATGTCGGACAGCAATGTGGCGCCGTTCCGCTACGCGGTCTCGCAAGGCGGCGAGCGCAACACCATCGTT
GCCACGGCCGACTATTACGAAGGCCCGTTCGGCACCGTCATGATCCACCCGAACCGCGTTCAGGCGGCGACGGCGGCGAC
GGCGCGCAACGCCTTCTTCCTCGATACCGACATGCTGGAATTCCTCTGGCTGCGAAAGATCCAGGAAGACAAGGACGTTG
CCAAGACCGGCGACGCCGACAAGGGTGTGATCATAGGCGAGGGCACGCTGAAGGTGAAGAACGAGAAGGGCCTCGGCGTC
GCTGCCGACCTCTTCGGGCTGAGCGAGGCAGGCTGA

Upstream 100 bases:

>100_bases
GATCGATTTCGAATAACCCCCATCTTCAAACACTTGTCGCGTTTGCGGACGGAAAACCGGATCGCCACTTGTCCTGCAAA
CGCTTTCGAAGGATCAGAAC

Downstream 100 bases:

>100_bases
ATATAAATGGGCGAGTCTCGGCTCGCCCATTTACCACCGAGGTGGGAATTGCGAACCCGCAACACAAGTGCCGTCATCAA
AACGACCACTGAACGCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Related Protein

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MAALANTYMTTQAVGNREELSDVVSRITPEDTPIYSFIEKGKCVSIHPEWETDELAAPGENIKSEGDEYAFGAITPPERL
GNYTQIMRKDWIISGTQEVVSEAGNVQKRKYQKLKKGIEIRKDVEYAIVDTNASVAGATREFGSLNTWIETNVSRGAGGA
NGGFDNATGLTVAPTDGEQRAFTKSILDSVMQAGYQSGANFRHVSVSPYVKSVFVTFMSDSNVAPFRYAVSQGGERNTIV
ATADYYEGPFGTVMIHPNRVQAATAATARNAFFLDTDMLEFLWLRKIQEDKDVAKTGDADKGVIIGEGTLKVKNEKGLGV
AADLFGLSEAG

Sequences:

>Translated_331_residues
MAALANTYMTTQAVGNREELSDVVSRITPEDTPIYSFIEKGKCVSIHPEWETDELAAPGENIKSEGDEYAFGAITPPERL
GNYTQIMRKDWIISGTQEVVSEAGNVQKRKYQKLKKGIEIRKDVEYAIVDTNASVAGATREFGSLNTWIETNVSRGAGGA
NGGFDNATGLTVAPTDGEQRAFTKSILDSVMQAGYQSGANFRHVSVSPYVKSVFVTFMSDSNVAPFRYAVSQGGERNTIV
ATADYYEGPFGTVMIHPNRVQAATAATARNAFFLDTDMLEFLWLRKIQEDKDVAKTGDADKGVIIGEGTLKVKNEKGLGV
AADLFGLSEAG
>Mature_330_residues
AALANTYMTTQAVGNREELSDVVSRITPEDTPIYSFIEKGKCVSIHPEWETDELAAPGENIKSEGDEYAFGAITPPERLG
NYTQIMRKDWIISGTQEVVSEAGNVQKRKYQKLKKGIEIRKDVEYAIVDTNASVAGATREFGSLNTWIETNVSRGAGGAN
GGFDNATGLTVAPTDGEQRAFTKSILDSVMQAGYQSGANFRHVSVSPYVKSVFVTFMSDSNVAPFRYAVSQGGERNTIVA
TADYYEGPFGTVMIHPNRVQAATAATARNAFFLDTDMLEFLWLRKIQEDKDVAKTGDADKGVIIGEGTLKVKNEKGLGVA
ADLFGLSEAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35868; Mature: 35737

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALANTYMTTQAVGNREELSDVVSRITPEDTPIYSFIEKGKCVSIHPEWETDELAAPGE
CCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCC
NIKSEGDEYAFGAITPPERLGNYTQIMRKDWIISGTQEVVSEAGNVQKRKYQKLKKGIEI
CHHCCCCCEEECCCCCHHHHCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCC
RKDVEYAIVDTNASVAGATREFGSLNTWIETNVSRGAGGANGGFDNATGLTVAPTDGEQR
CCCCEEEEEECCCCCCCCHHHHCCCCHHEECCCCCCCCCCCCCCCCCCCCEEECCCCHHH
AFTKSILDSVMQAGYQSGANFRHVSVSPYVKSVFVTFMSDSNVAPFRYAVSQGGERNTIV
HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHEECCCCCCCHHHHHHCCCCCCEEE
ATADYYEGPFGTVMIHPNRVQAATAATARNAFFLDTDMLEFLWLRKIQEDKDVAKTGDAD
EEECCCCCCCEEEEECCCCHHHHHHHHHCCEEEECHHHHHHHHHHHHHCCHHHHHCCCCC
KGVIIGEGTLKVKNEKGLGVAADLFGLSEAG
CCEEEECCEEEEECCCCCEEEHHHCCCCCCC
>Mature Secondary Structure 
AALANTYMTTQAVGNREELSDVVSRITPEDTPIYSFIEKGKCVSIHPEWETDELAAPGE
CCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCC
NIKSEGDEYAFGAITPPERLGNYTQIMRKDWIISGTQEVVSEAGNVQKRKYQKLKKGIEI
CHHCCCCCEEECCCCCHHHHCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCC
RKDVEYAIVDTNASVAGATREFGSLNTWIETNVSRGAGGANGGFDNATGLTVAPTDGEQR
CCCCEEEEEECCCCCCCCHHHHCCCCHHEECCCCCCCCCCCCCCCCCCCCEEECCCCHHH
AFTKSILDSVMQAGYQSGANFRHVSVSPYVKSVFVTFMSDSNVAPFRYAVSQGGERNTIV
HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHEECCCCCCCHHHHHHCCCCCCEEE
ATADYYEGPFGTVMIHPNRVQAATAATARNAFFLDTDMLEFLWLRKIQEDKDVAKTGDAD
EEECCCCCCCEEEEECCCCHHHHHHHHHCCEEEECHHHHHHHHHHHHHCCHHHHHCCCCC
KGVIIGEGTLKVKNEKGLGVAADLFGLSEAG
CCEEEECCEEEEECCCCCEEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA