Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397034

Identifier: 150397034

GI number: 150397034

Start: 1910674

End: 1911642

Strand: Reverse

Name: 150397034

Synonym: Smed_1831

Alternate gene names: NA

Gene position: 1911642-1910674 (Counterclockwise)

Preceding gene: 150397035

Following gene: 150397033

Centisome position: 50.55

GC content: 61.3

Gene sequence:

>969_bases
ATGACAGACGCAGCCACCAACTTCCCGTCCGGGGAGAGTGATAGCGGTCGCCCCGCACTCAGCTTCGATCACGCCGTCGA
CCTCGACTTCGCCGAGTCCTCCGAGACCAACGAACGGGAAGAGGAAGAGCGGCAATCGACGAATGCGACGGATGAGGCCC
CGGAAGACGAGGGCCAAGAGACCGGCGAACCCGCAGACCAGGGCGACGAGACAACCGAACCCGGCGAAGAGGGCGAGGAG
TCCAACGAAGCCCCGGACACGATCATTACCCTGAAAGGGGGCGAGCAGGTTCCCCTGGAGGAACTGAAGCTCGGCTATTT
GCGGGAGCGCGACTACCGCCACAAAACTCAGGAACTCGGCAATAAGGGCCGAAATCTCGAGACCATGACAACCCGCGTCG
CCACAACGGCGAACGCCATCGCAGAATTCCTGATCCAGCAGCTGCCGGCCGAGCCGACGCGAATGTTGGCGATCCAGAAT
CCGGCCGAGTACACGCGCCAGAAGTCTGTTTACGACGGGGCTCTGGAACAGGTTCAGCGCCTCATCGACGTGAGCGCCGA
GCCGAAACGGGTGGGCGACGAACTCAAACAGGCCGCAACGCAGGAAACCCTTGCGGCCGAGAACGCGAAGCTGCTCGAAG
CCTTCCCGCGCCTCGCGAGGGAGGATGCCCGAGAGAGATTTTTTGCCGAAGCTTTCAAGGCCGGTGAGGATTTCGGGTTT
TCCCAGGACGAGATGCAGGGCTTCACCGACCACCGCTACTTCAAGGTCATGCACTACGCCATGCTCGGGTTTCGGGCAGA
ACAGGCGAAGAGCAAGGCCTTGACGAAGGTGGCAAACGCGCCCCCGGCCACAGCGAAAAGCAAGCCGAAGGGCCCGGCGA
ACCCTCAGGCACGCAAGAACCAGGATGCGATGAAGAGGTTGGCAAAAACAGGTTCGATCAAGGACGCGCTCCTGATCGAT
TTCGAATAA

Upstream 100 bases:

>100_bases
CCCTTCGTTGAACCACCGAACCATCGACCTCTCGAAACTACGCACCTCCCGGGAGAACCATCGCGGTCTTCCTGAAGTGC
TCTGAAAGGCAAAGCCAGAC

Downstream 100 bases:

>100_bases
CCCCCATCTTCAAACACTTGTCGCGTTTGCGGACGGAAAACCGGATCGCCACTTGTCCTGCAAACGCTTTCGAAGGATCA
GAACATGGCAGCTCTTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTDAATNFPSGESDSGRPALSFDHAVDLDFAESSETNEREEEERQSTNATDEAPEDEGQETGEPADQGDETTEPGEEGEE
SNEAPDTIITLKGGEQVPLEELKLGYLRERDYRHKTQELGNKGRNLETMTTRVATTANAIAEFLIQQLPAEPTRMLAIQN
PAEYTRQKSVYDGALEQVQRLIDVSAEPKRVGDELKQAATQETLAAENAKLLEAFPRLAREDARERFFAEAFKAGEDFGF
SQDEMQGFTDHRYFKVMHYAMLGFRAEQAKSKALTKVANAPPATAKSKPKGPANPQARKNQDAMKRLAKTGSIKDALLID
FE

Sequences:

>Translated_322_residues
MTDAATNFPSGESDSGRPALSFDHAVDLDFAESSETNEREEEERQSTNATDEAPEDEGQETGEPADQGDETTEPGEEGEE
SNEAPDTIITLKGGEQVPLEELKLGYLRERDYRHKTQELGNKGRNLETMTTRVATTANAIAEFLIQQLPAEPTRMLAIQN
PAEYTRQKSVYDGALEQVQRLIDVSAEPKRVGDELKQAATQETLAAENAKLLEAFPRLAREDARERFFAEAFKAGEDFGF
SQDEMQGFTDHRYFKVMHYAMLGFRAEQAKSKALTKVANAPPATAKSKPKGPANPQARKNQDAMKRLAKTGSIKDALLID
FE
>Mature_321_residues
TDAATNFPSGESDSGRPALSFDHAVDLDFAESSETNEREEEERQSTNATDEAPEDEGQETGEPADQGDETTEPGEEGEES
NEAPDTIITLKGGEQVPLEELKLGYLRERDYRHKTQELGNKGRNLETMTTRVATTANAIAEFLIQQLPAEPTRMLAIQNP
AEYTRQKSVYDGALEQVQRLIDVSAEPKRVGDELKQAATQETLAAENAKLLEAFPRLAREDARERFFAEAFKAGEDFGFS
QDEMQGFTDHRYFKVMHYAMLGFRAEQAKSKALTKVANAPPATAKSKPKGPANPQARKNQDAMKRLAKTGSIKDALLIDF
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35664; Mature: 35532

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAATNFPSGESDSGRPALSFDHAVDLDFAESSETNEREEEERQSTNATDEAPEDEGQE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
TGEPADQGDETTEPGEEGEESNEAPDTIITLKGGEQVPLEELKLGYLRERDYRHKTQELG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NKGRNLETMTTRVATTANAIAEFLIQQLPAEPTRMLAIQNPAEYTRQKSVYDGALEQVQR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHH
LIDVSAEPKRVGDELKQAATQETLAAENAKLLEAFPRLAREDARERFFAEAFKAGEDFGF
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SQDEMQGFTDHRYFKVMHYAMLGFRAEQAKSKALTKVANAPPATAKSKPKGPANPQARKN
CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
QDAMKRLAKTGSIKDALLIDFE
HHHHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure 
TDAATNFPSGESDSGRPALSFDHAVDLDFAESSETNEREEEERQSTNATDEAPEDEGQE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
TGEPADQGDETTEPGEEGEESNEAPDTIITLKGGEQVPLEELKLGYLRERDYRHKTQELG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NKGRNLETMTTRVATTANAIAEFLIQQLPAEPTRMLAIQNPAEYTRQKSVYDGALEQVQR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHH
LIDVSAEPKRVGDELKQAATQETLAAENAKLLEAFPRLAREDARERFFAEAFKAGEDFGF
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SQDEMQGFTDHRYFKVMHYAMLGFRAEQAKSKALTKVANAPPATAKSKPKGPANPQARKN
CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
QDAMKRLAKTGSIKDALLIDFE
HHHHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA